BacMap

Definition	Shewanella amazonensis SB2B chromosome, complete genome.
Accession	NC_008700
Length	4,306,142

Click here to switch to the map view.

The map label for this gene is rhlE [H]

Identifier: 119775581

GI number: 119775581

Start: 2945111

End: 2946454

Strand: Reverse

Name: rhlE [H]

Synonym: Sama_2447

Alternate gene names: 119775581

Gene position: 2946454-2945111 (Counterclockwise)

Preceding gene: 119775582

Following gene: 119775580

Centisome position: 68.42

GC content: 61.24

Gene sequence:

>1344_bases
ATGTCTTTCGATTCTCTGGGATTGGCAGCACCTCTGCTGCAGACGCTGATACAGTGCGGATATCGTACGCCAACCGAAAT
TCAGGCCCAGAGTATCCCTGTGCTCCTCAGTGGCCGGGATTTGATTGCGGTAGCCCAAACCGGCAGCGGGAAAACGGCGG
CCTTTGCGTTGCCGATATTGAAGCAGCTCTCGGACAAGGGGCTGCGTGGCGGGATACAGGCGCTGGTGTTGGTGCCAACC
CGGGAGCTGGCTGTGCAAGTGGCCGATGCCTTTACGCGCTACAGTGCCGGGTTGGGGCTGACGACCCTCGCCGTTTACGG
TGGGGTGAATATCCGTCCCCAACGCCAGGCGCTGGCCGCCGGGGTGGACATACTGGTGGCCACACCGGGGCGGCTGTTGG
ATTTGACCGGTCAGTTTGGTCTGTCTCTTGCGAGTGTCGGCACCCTTGTGCTGGATGAAGCCGACCGCATGCTGGATATG
GGGTTTGCCCCCGACATAGAAAAGATACGCCGCCAGCTGGGGCCGCATCAAAGTGCCATGTTTTCAGCAAGCTTTGCCCA
GCGGGAGCGTGAACTGGCTGAGCGCTGGCTCTCCAATGCAGTCAGCCTTGCCGCCAAAGACACCGGCCGTATTCCACAGC
AGCTTGCCCTCGAAGTCTTTATGCTCGATAAGCCCAGATGGGCCGAGTTTGTCGCCGAGCTGGTGGGAAAGCGCAACTGG
CGCCAGGCGCTGGTGTTTGTCTCCTCCCGGGAGGAGTCCAATACCCTGGTGGCAGAACTGGCCCTCGATGGGCTGCAGGC
GGCCGCATTTCATGGTGAGAAAACCCAGGGTGCCAGACGGCGCGGTCTGGATGAGTTCAAATCCGGCAAACTCAGATTGC
TGGTGGCAACCGACGTGGCAGCCAGGGGGCTGGATATCGAAGACTTGCCCGTGGTAATAAGTCTTGGGTTGCCCCACGGT
GAAGAAGACCTGATACATCGCCTTGGCCGCAGTGCCCGAGCCGGCCGGGAAGGCCTGGCTGTGATCGTCTTGTCACCTGA
GATGCGCGCCGATTTGCCGCTGCTGAAAGCGCTTTGCCCGGCACTGCCAGAGGTGATCACCCCTGAGGGATACAGCCCTA
AAGACCCATTGCCCCAGCGATATCGCGACGGGGCTTTATCAACGCCGGGAAGCAAGCCTGCCAATAGGTCTGGGCGAAAT
GCAGGGCAGCGCCCAGGCACTCGCACAGGTAGCCGCACGGGCAGTCGTACAGGTGGACGGACTGGCAGCAGCAATGGCTC
ACCGCGGCAATCAGGAAAACCTGCCCGGCAAGGAAACGCTCCAAAGCGGCAAGCCCGGGGCTGA

Upstream 100 bases:

>100_bases
GCTTGCTGATTAAACCCGTTTGACCTTGAGTGGCGCGCCGTTATACTGCGCTCTTTTTGCAAACTGGCAGTGCTGAGCAA
CTTGCCACCACAGGAGACTT

Downstream 100 bases:

>100_bases
GGATGTCAGCTGCAGGGCTTTTAGGTACACTGGCCGGATTTTAGCGCGTTGCCGTTTACCGCTGTGTTTCCACCGCGAGC
GGCTGCACACCGAAAAAGGC

Product: DEAD-box ATP dependent DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MSFDSLGLAAPLLQTLIQCGYRTPTEIQAQSIPVLLSGRDLIAVAQTGSGKTAAFALPILKQLSDKGLRGGIQALVLVPT
RELAVQVADAFTRYSAGLGLTTLAVYGGVNIRPQRQALAAGVDILVATPGRLLDLTGQFGLSLASVGTLVLDEADRMLDM
GFAPDIEKIRRQLGPHQSAMFSASFAQRERELAERWLSNAVSLAAKDTGRIPQQLALEVFMLDKPRWAEFVAELVGKRNW
RQALVFVSSREESNTLVAELALDGLQAAAFHGEKTQGARRRGLDEFKSGKLRLLVATDVAARGLDIEDLPVVISLGLPHG
EEDLIHRLGRSARAGREGLAVIVLSPEMRADLPLLKALCPALPEVITPEGYSPKDPLPQRYRDGALSTPGSKPANRSGRN
AGQRPGTRTGSRTGSRTGGRTGSSNGSPRQSGKPARQGNAPKRQARG

Sequences:

>Translated_447_residues
MSFDSLGLAAPLLQTLIQCGYRTPTEIQAQSIPVLLSGRDLIAVAQTGSGKTAAFALPILKQLSDKGLRGGIQALVLVPT
RELAVQVADAFTRYSAGLGLTTLAVYGGVNIRPQRQALAAGVDILVATPGRLLDLTGQFGLSLASVGTLVLDEADRMLDM
GFAPDIEKIRRQLGPHQSAMFSASFAQRERELAERWLSNAVSLAAKDTGRIPQQLALEVFMLDKPRWAEFVAELVGKRNW
RQALVFVSSREESNTLVAELALDGLQAAAFHGEKTQGARRRGLDEFKSGKLRLLVATDVAARGLDIEDLPVVISLGLPHG
EEDLIHRLGRSARAGREGLAVIVLSPEMRADLPLLKALCPALPEVITPEGYSPKDPLPQRYRDGALSTPGSKPANRSGRN
AGQRPGTRTGSRTGSRTGGRTGSSNGSPRQSGKPARQGNAPKRQARG
>Mature_446_residues
SFDSLGLAAPLLQTLIQCGYRTPTEIQAQSIPVLLSGRDLIAVAQTGSGKTAAFALPILKQLSDKGLRGGIQALVLVPTR
ELAVQVADAFTRYSAGLGLTTLAVYGGVNIRPQRQALAAGVDILVATPGRLLDLTGQFGLSLASVGTLVLDEADRMLDMG
FAPDIEKIRRQLGPHQSAMFSASFAQRERELAERWLSNAVSLAAKDTGRIPQQLALEVFMLDKPRWAEFVAELVGKRNWR
QALVFVSSREESNTLVAELALDGLQAAAFHGEKTQGARRRGLDEFKSGKLRLLVATDVAARGLDIEDLPVVISLGLPHGE
EDLIHRLGRSARAGREGLAVIVLSPEMRADLPLLKALCPALPEVITPEGYSPKDPLPQRYRDGALSTPGSKPANRSGRNA
GQRPGTRTGSRTGSRTGGRTGSSNGSPRQSGKPARQGNAPKRQARG

Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI222352149, Length=352, Percent_Identity=37.7840909090909, Blast_Score=236, Evalue=4e-62,
Organism=Homo sapiens, GI4758138, Length=378, Percent_Identity=36.7724867724868, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI148613856, Length=368, Percent_Identity=37.2282608695652, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI38201710, Length=368, Percent_Identity=37.2282608695652, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI13518015, Length=383, Percent_Identity=36.0313315926893, Blast_Score=232, Evalue=6e-61,
Organism=Homo sapiens, GI216548263, Length=383, Percent_Identity=36.0313315926893, Blast_Score=232, Evalue=6e-61,
Organism=Homo sapiens, GI262118318, Length=383, Percent_Identity=36.0313315926893, Blast_Score=232, Evalue=7e-61,
Organism=Homo sapiens, GI262231852, Length=383, Percent_Identity=36.0313315926893, Blast_Score=231, Evalue=7e-61,
Organism=Homo sapiens, GI224593278, Length=367, Percent_Identity=37.874659400545, Blast_Score=229, Evalue=5e-60,
Organism=Homo sapiens, GI41327773, Length=369, Percent_Identity=36.5853658536585, Blast_Score=226, Evalue=2e-59,
Organism=Homo sapiens, GI45446747, Length=352, Percent_Identity=36.3636363636364, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI45446743, Length=352, Percent_Identity=36.3636363636364, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI169881239, Length=387, Percent_Identity=36.4341085271318, Blast_Score=222, Evalue=6e-58,
Organism=Homo sapiens, GI13514809, Length=387, Percent_Identity=36.4341085271318, Blast_Score=222, Evalue=6e-58,
Organism=Homo sapiens, GI87196351, Length=389, Percent_Identity=36.7609254498715, Blast_Score=222, Evalue=6e-58,
Organism=Homo sapiens, GI301171467, Length=389, Percent_Identity=36.7609254498715, Blast_Score=222, Evalue=7e-58,
Organism=Homo sapiens, GI301171475, Length=389, Percent_Identity=36.7609254498715, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI51094101, Length=356, Percent_Identity=36.5168539325843, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI164419743, Length=356, Percent_Identity=36.5168539325843, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI41327771, Length=389, Percent_Identity=33.9331619537275, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI55749865, Length=407, Percent_Identity=33.4152334152334, Blast_Score=217, Evalue=1e-56,
Organism=Homo sapiens, GI20149629, Length=346, Percent_Identity=35.5491329479769, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=33.8935574229692, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI7661920, Length=342, Percent_Identity=32.1637426900585, Blast_Score=195, Evalue=6e-50,
Organism=Homo sapiens, GI38569505, Length=378, Percent_Identity=35.978835978836, Blast_Score=195, Evalue=8e-50,
Organism=Homo sapiens, GI38569503, Length=378, Percent_Identity=35.978835978836, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI41327776, Length=346, Percent_Identity=34.393063583815, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI31542656, Length=366, Percent_Identity=35.2459016393443, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI164664518, Length=352, Percent_Identity=31.5340909090909, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI21040371, Length=359, Percent_Identity=30.6406685236769, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI188035877, Length=351, Percent_Identity=32.4786324786325, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI4503529, Length=354, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI4758112, Length=359, Percent_Identity=30.3621169916435, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI18375623, Length=359, Percent_Identity=30.3621169916435, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI83700235, Length=354, Percent_Identity=33.6158192090396, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI50659095, Length=368, Percent_Identity=33.695652173913, Blast_Score=175, Evalue=7e-44,
Organism=Homo sapiens, GI13129006, Length=345, Percent_Identity=33.9130434782609, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI38327634, Length=357, Percent_Identity=34.453781512605, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI13514831, Length=376, Percent_Identity=31.3829787234043, Blast_Score=162, Evalue=8e-40,
Organism=Homo sapiens, GI17505907, Length=406, Percent_Identity=30.5418719211823, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI41327779, Length=381, Percent_Identity=33.0708661417323, Blast_Score=152, Evalue=7e-37,
Organism=Homo sapiens, GI164419732, Length=340, Percent_Identity=32.9411764705882, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI6005743, Length=356, Percent_Identity=32.3033707865169, Blast_Score=147, Evalue=3e-35,
Organism=Homo sapiens, GI8922886, Length=358, Percent_Identity=32.4022346368715, Blast_Score=145, Evalue=7e-35,
Organism=Homo sapiens, GI9506931, Length=395, Percent_Identity=29.620253164557, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI154759257, Length=387, Percent_Identity=30.749354005168, Blast_Score=139, Evalue=6e-33,
Organism=Homo sapiens, GI62241022, Length=338, Percent_Identity=31.9526627218935, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI256223453, Length=357, Percent_Identity=29.6918767507003, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=30.6547619047619, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI62241024, Length=317, Percent_Identity=32.1766561514196, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI20336298, Length=219, Percent_Identity=35.6164383561644, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI256773275, Length=374, Percent_Identity=30.7486631016043, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI284005309, Length=369, Percent_Identity=26.5582655826558, Blast_Score=73, Evalue=5e-13,
Organism=Escherichia coli, GI1787016, Length=383, Percent_Identity=47.2584856396867, Blast_Score=330, Evalue=1e-91,
Organism=Escherichia coli, GI87082221, Length=370, Percent_Identity=39.7297297297297, Blast_Score=246, Evalue=2e-66,
Organism=Escherichia coli, GI1790214, Length=428, Percent_Identity=32.9439252336449, Blast_Score=204, Evalue=7e-54,
Organism=Escherichia coli, GI1787605, Length=446, Percent_Identity=33.6322869955157, Blast_Score=193, Evalue=2e-50,
Organism=Escherichia coli, GI1788930, Length=327, Percent_Identity=37.6146788990826, Blast_Score=189, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI115533224, Length=433, Percent_Identity=35.796766743649, Blast_Score=239, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI17510307, Length=371, Percent_Identity=38.2749326145553, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI71995514, Length=371, Percent_Identity=38.2749326145553, Blast_Score=229, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17510309, Length=371, Percent_Identity=38.2749326145553, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI86570094, Length=360, Percent_Identity=36.3888888888889, Blast_Score=221, Evalue=8e-58,
Organism=Caenorhabditis elegans, GI17555296, Length=346, Percent_Identity=35.5491329479769, Blast_Score=214, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI17537549, Length=370, Percent_Identity=35.6756756756757, Blast_Score=211, Evalue=8e-55,
Organism=Caenorhabditis elegans, GI32565321, Length=379, Percent_Identity=32.7176781002639, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI71987143, Length=347, Percent_Identity=32.8530259365994, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17552642, Length=431, Percent_Identity=32.9466357308585, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=35.7723577235772, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17510559, Length=389, Percent_Identity=34.4473007712082, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI71995724, Length=342, Percent_Identity=33.3333333333333, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI17507121, Length=342, Percent_Identity=33.0409356725146, Blast_Score=197, Evalue=7e-51,
Organism=Caenorhabditis elegans, GI71999644, Length=360, Percent_Identity=32.7777777777778, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17507945, Length=377, Percent_Identity=33.6870026525199, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI71999646, Length=360, Percent_Identity=32.7777777777778, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=32.1621621621622, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17507877, Length=385, Percent_Identity=32.7272727272727, Blast_Score=182, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17507879, Length=394, Percent_Identity=31.4720812182741, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17552114, Length=387, Percent_Identity=29.9741602067183, Blast_Score=181, Evalue=7e-46,
Organism=Caenorhabditis elegans, GI193208216, Length=405, Percent_Identity=32.0987654320988, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17509811, Length=355, Percent_Identity=33.5211267605634, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI115532548, Length=394, Percent_Identity=31.7258883248731, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=32.2751322751323, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI71982858, Length=357, Percent_Identity=29.9719887955182, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17505370, Length=373, Percent_Identity=34.3163538873995, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI193206561, Length=359, Percent_Identity=28.4122562674095, Blast_Score=150, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI71990816, Length=388, Percent_Identity=29.3814432989691, Blast_Score=145, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI17556951, Length=377, Percent_Identity=29.973474801061, Blast_Score=145, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI17508543, Length=389, Percent_Identity=30.8483290488432, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17507641, Length=404, Percent_Identity=29.4554455445545, Blast_Score=135, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI25148203, Length=398, Percent_Identity=24.6231155778894, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI32564046, Length=405, Percent_Identity=28.3950617283951, Blast_Score=128, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI71997889, Length=351, Percent_Identity=29.6296296296296, Blast_Score=124, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI17536099, Length=378, Percent_Identity=27.7777777777778, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17536101, Length=378, Percent_Identity=27.7777777777778, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17536103, Length=382, Percent_Identity=27.7486910994764, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71982862, Length=203, Percent_Identity=32.512315270936, Blast_Score=112, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17553716, Length=354, Percent_Identity=24.2937853107345, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI25148291, Length=328, Percent_Identity=26.8292682926829, Blast_Score=104, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI25148205, Length=325, Percent_Identity=24, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI71987152, Length=74, Percent_Identity=43.2432432432432, Blast_Score=75, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6324778, Length=414, Percent_Identity=35.5072463768116, Blast_Score=237, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6321360, Length=358, Percent_Identity=39.1061452513966, Blast_Score=237, Evalue=3e-63,
Organism=Saccharomyces cerevisiae, GI6325138, Length=386, Percent_Identity=36.0103626943005, Blast_Score=226, Evalue=4e-60,
Organism=Saccharomyces cerevisiae, GI6324217, Length=357, Percent_Identity=36.6946778711485, Blast_Score=223, Evalue=7e-59,
Organism=Saccharomyces cerevisiae, GI6321856, Length=361, Percent_Identity=36.5650969529086, Blast_Score=213, Evalue=4e-56,
Organism=Saccharomyces cerevisiae, GI6323021, Length=393, Percent_Identity=36.6412213740458, Blast_Score=208, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6320041, Length=355, Percent_Identity=34.3661971830986, Blast_Score=204, Evalue=2e-53,
Organism=Saccharomyces cerevisiae, GI6320224, Length=386, Percent_Identity=29.5336787564767, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6322427, Length=362, Percent_Identity=33.4254143646409, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6323947, Length=381, Percent_Identity=32.5459317585302, Blast_Score=179, Evalue=7e-46,
Organism=Saccharomyces cerevisiae, GI6319714, Length=387, Percent_Identity=30.749354005168, Blast_Score=175, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6324620, Length=353, Percent_Identity=32.8611898016997, Blast_Score=173, Evalue=4e-44,
Organism=Saccharomyces cerevisiae, GI6320119, Length=353, Percent_Identity=31.4447592067989, Blast_Score=172, Evalue=8e-44,
Organism=Saccharomyces cerevisiae, GI6320449, Length=361, Percent_Identity=31.8559556786704, Blast_Score=170, Evalue=4e-43,
Organism=Saccharomyces cerevisiae, GI6321963, Length=354, Percent_Identity=33.0508474576271, Blast_Score=166, Evalue=9e-42,
Organism=Saccharomyces cerevisiae, GI6321111, Length=398, Percent_Identity=29.3969849246231, Blast_Score=157, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6319618, Length=413, Percent_Identity=29.5399515738499, Blast_Score=155, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6321267, Length=333, Percent_Identity=30.9309309309309, Blast_Score=150, Evalue=5e-37,
Organism=Saccharomyces cerevisiae, GI6320400, Length=398, Percent_Identity=29.6482412060301, Blast_Score=149, Evalue=8e-37,
Organism=Saccharomyces cerevisiae, GI6322912, Length=352, Percent_Identity=30.6818181818182, Blast_Score=148, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6322323, Length=352, Percent_Identity=30.6818181818182, Blast_Score=148, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6320173, Length=185, Percent_Identity=38.3783783783784, Blast_Score=142, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=26.1501210653753, Blast_Score=132, Evalue=9e-32,
Organism=Saccharomyces cerevisiae, GI6324366, Length=346, Percent_Identity=26.3005780346821, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6321374, Length=398, Percent_Identity=24.3718592964824, Blast_Score=94, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6322876, Length=183, Percent_Identity=33.879781420765, Blast_Score=87, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21355075, Length=364, Percent_Identity=38.7362637362637, Blast_Score=241, Evalue=7e-64,
Organism=Drosophila melanogaster, GI24642151, Length=352, Percent_Identity=37.5, Blast_Score=236, Evalue=2e-62,
Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=36.1823361823362, Blast_Score=231, Evalue=7e-61,
Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=36.2606232294618, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24662330, Length=350, Percent_Identity=36.8571428571429, Blast_Score=228, Evalue=4e-60,
Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=36.7123287671233, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI17985987, Length=390, Percent_Identity=35.6410256410256, Blast_Score=225, Evalue=5e-59,
Organism=Drosophila melanogaster, GI24585582, Length=349, Percent_Identity=36.1031518624642, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24644479, Length=372, Percent_Identity=35.2150537634409, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI281361218, Length=372, Percent_Identity=35.2150537634409, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24644481, Length=372, Percent_Identity=35.2150537634409, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24644483, Length=372, Percent_Identity=35.2150537634409, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24644487, Length=372, Percent_Identity=35.2150537634409, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI45551833, Length=372, Percent_Identity=35.2150537634409, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24644485, Length=372, Percent_Identity=35.2150537634409, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI21356161, Length=353, Percent_Identity=37.1104815864023, Blast_Score=211, Evalue=9e-55,
Organism=Drosophila melanogaster, GI24584994, Length=400, Percent_Identity=32.5, Blast_Score=209, Evalue=3e-54,
Organism=Drosophila melanogaster, GI28575014, Length=354, Percent_Identity=35.5932203389831, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24645031, Length=351, Percent_Identity=32.1937321937322, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=36.5384615384615, Blast_Score=191, Evalue=6e-49,
Organism=Drosophila melanogaster, GI17977678, Length=357, Percent_Identity=32.7731092436975, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI17136814, Length=367, Percent_Identity=34.8773841961853, Blast_Score=184, Evalue=9e-47,
Organism=Drosophila melanogaster, GI24583279, Length=374, Percent_Identity=29.4117647058824, Blast_Score=184, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24583281, Length=375, Percent_Identity=29.3333333333333, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24582080, Length=332, Percent_Identity=31.9277108433735, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI24582078, Length=332, Percent_Identity=31.9277108433735, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI17136248, Length=332, Percent_Identity=31.9277108433735, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI24582075, Length=332, Percent_Identity=31.9277108433735, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI24581954, Length=358, Percent_Identity=31.0055865921788, Blast_Score=171, Evalue=9e-43,
Organism=Drosophila melanogaster, GI24581952, Length=358, Percent_Identity=31.0055865921788, Blast_Score=171, Evalue=9e-43,
Organism=Drosophila melanogaster, GI24581956, Length=358, Percent_Identity=31.0055865921788, Blast_Score=171, Evalue=9e-43,
Organism=Drosophila melanogaster, GI28571808, Length=366, Percent_Identity=31.9672131147541, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI28571809, Length=366, Percent_Identity=31.9672131147541, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24666101, Length=356, Percent_Identity=33.9887640449438, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI20130173, Length=449, Percent_Identity=26.9487750556793, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24643725, Length=424, Percent_Identity=27.122641509434, Blast_Score=142, Evalue=5e-34,
Organism=Drosophila melanogaster, GI28571338, Length=414, Percent_Identity=28.743961352657, Blast_Score=142, Evalue=6e-34,
Organism=Drosophila melanogaster, GI18859659, Length=414, Percent_Identity=28.743961352657, Blast_Score=142, Evalue=6e-34,
Organism=Drosophila melanogaster, GI24642822, Length=368, Percent_Identity=29.8913043478261, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI17647335, Length=394, Percent_Identity=25.6345177664975, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI21355559, Length=383, Percent_Identity=32.6370757180157, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI17136666, Length=407, Percent_Identity=28.5012285012285, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=26.605504587156, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI24640164, Length=346, Percent_Identity=27.4566473988439, Blast_Score=115, Evalue=8e-26,
Organism=Drosophila melanogaster, GI19920478, Length=352, Percent_Identity=27.8409090909091, Blast_Score=110, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 47702; Mature: 47571

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDSLGLAAPLLQTLIQCGYRTPTEIQAQSIPVLLSGRDLIAVAQTGSGKTAAFALPIL
CCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHH
KQLSDKGLRGGIQALVLVPTRELAVQVADAFTRYSAGLGLTTLAVYGGVNIRPQRQALAA
HHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHC
GVDILVATPGRLLDLTGQFGLSLASVGTLVLDEADRMLDMGFAPDIEKIRRQLGPHQSAM
CCEEEEECCCCEEECCCHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHH
FSASFAQRERELAERWLSNAVSLAAKDTGRIPQQLALEVFMLDKPRWAEFVAELVGKRNW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCH
RQALVFVSSREESNTLVAELALDGLQAAAFHGEKTQGARRRGLDEFKSGKLRLLVATDVA
HEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHCCCCEEEEEEECHH
ARGLDIEDLPVVISLGLPHGEEDLIHRLGRSARAGREGLAVIVLSPEMRADLPLLKALCP
HCCCCCCCCCEEEEECCCCCHHHHHHHHCHHHCCCCCCCEEEEECCCHHCCHHHHHHHHH
ALPEVITPEGYSPKDPLPQRYRDGALSTPGSKPANRSGRNAGQRPGTRTGSRTGSRTGGR
HHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGSSNGSPRQSGKPARQGNAPKRQARG
CCCCCCCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
SFDSLGLAAPLLQTLIQCGYRTPTEIQAQSIPVLLSGRDLIAVAQTGSGKTAAFALPIL
CCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHH
KQLSDKGLRGGIQALVLVPTRELAVQVADAFTRYSAGLGLTTLAVYGGVNIRPQRQALAA
HHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHC
GVDILVATPGRLLDLTGQFGLSLASVGTLVLDEADRMLDMGFAPDIEKIRRQLGPHQSAM
CCEEEEECCCCEEECCCHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHH
FSASFAQRERELAERWLSNAVSLAAKDTGRIPQQLALEVFMLDKPRWAEFVAELVGKRNW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCH
RQALVFVSSREESNTLVAELALDGLQAAAFHGEKTQGARRRGLDEFKSGKLRLLVATDVA
HEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHCCCCEEEEEEECHH
ARGLDIEDLPVVISLGLPHGEEDLIHRLGRSARAGREGLAVIVLSPEMRADLPLLKALCP
HCCCCCCCCCEEEEECCCCCHHHHHHHHCHHHCCCCCCCEEEEECCCHHCCHHHHHHHHH
ALPEVITPEGYSPKDPLPQRYRDGALSTPGSKPANRSGRNAGQRPGTRTGSRTGSRTGGR
HHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGSSNGSPRQSGKPARQGNAPKRQARG
CCCCCCCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]