Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775559

Identifier: 119775559

GI number: 119775559

Start: 2920245

End: 2920820

Strand: Direct

Name: 119775559

Synonym: Sama_2425

Alternate gene names: NA

Gene position: 2920245-2920820 (Clockwise)

Preceding gene: 119775558

Following gene: 119775564

Centisome position: 67.82

GC content: 43.58

Gene sequence:

>576_bases
ATGTCCATATCCTATTTGAACAACTTGAATTGGTCAGATTGGACCAGAGAAGAGAGGTTTTTCTGCTCCTGTTTATACGA
GCAAGTCAACTCTGATCCTGCAGCCTTGGTAAGGCTTATTAACAGCGAGACATCGCTCAACCTAAAAGAAAATGTGTATT
GGGATATAGGCTACGAGGTTTGCTTATACCGGGACTACCAGTGGCATAGAGCTTCTTCACCGATTGGCGCATCGCAGTAT
TCTCAGAAGCGCACGTTCGATCTCTGTCTGTTTTCAGAAGATACAATCGTCATTATCGAAGCAAAGGCTTTCGGTCGATT
TTCCGAAGAGGATGGCAACAAATTAGCCAGAGATAGAAAACAAATACCGGAGTTATTAGCCAAACCAAACCTTAAGGTTT
GCACTGTTGCTTTAGCGTCATCCATCTATTTTGAGAACCATGGCAAATACGGTAAGCCGGATATCCTGGATGCATTTGAT
GCGAGGTTAACCTGGCACGCGCTTTTTAAAACCTATCACAATGCGCTGTTTGAACAAGCCGACAAGCTCTATAAGTCGTT
ACCGACTTTTGCATAG

Upstream 100 bases:

>100_bases
TTGTTGCTGTTTCAGAAAAGGCTATGATACGTCCACTCTGACAGGGTCCACCTTTTTGGTAAGTTGCACCTAAAGTAGCA
ATATCATCGAGTTAAATCTT

Downstream 100 bases:

>100_bases
TGTTCAAATGGAGTACCCAGATAAAATAAAGGCGCCATTGGGCGCCTTTATTTGTGCTCGAGCAAGCCTTGATCCGACTA
TCAAATCCAAGGTGAACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSISYLNNLNWSDWTREERFFCSCLYEQVNSDPAALVRLINSETSLNLKENVYWDIGYEVCLYRDYQWHRASSPIGASQY
SQKRTFDLCLFSEDTIVIIEAKAFGRFSEEDGNKLARDRKQIPELLAKPNLKVCTVALASSIYFENHGKYGKPDILDAFD
ARLTWHALFKTYHNALFEQADKLYKSLPTFA

Sequences:

>Translated_191_residues
MSISYLNNLNWSDWTREERFFCSCLYEQVNSDPAALVRLINSETSLNLKENVYWDIGYEVCLYRDYQWHRASSPIGASQY
SQKRTFDLCLFSEDTIVIIEAKAFGRFSEEDGNKLARDRKQIPELLAKPNLKVCTVALASSIYFENHGKYGKPDILDAFD
ARLTWHALFKTYHNALFEQADKLYKSLPTFA
>Mature_190_residues
SISYLNNLNWSDWTREERFFCSCLYEQVNSDPAALVRLINSETSLNLKENVYWDIGYEVCLYRDYQWHRASSPIGASQYS
QKRTFDLCLFSEDTIVIIEAKAFGRFSEEDGNKLARDRKQIPELLAKPNLKVCTVALASSIYFENHGKYGKPDILDAFDA
RLTWHALFKTYHNALFEQADKLYKSLPTFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22208; Mature: 22077

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISYLNNLNWSDWTREERFFCSCLYEQVNSDPAALVRLINSETSLNLKENVYWDIGYEV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEEECCCEE
CLYRDYQWHRASSPIGASQYSQKRTFDLCLFSEDTIVIIEAKAFGRFSEEDGNKLARDRK
EEEECCCHHCCCCCCCCHHHHCCCCEEEEEECCCEEEEEEEHHCCCCCCCCCHHHHHHHH
QIPELLAKPNLKVCTVALASSIYFENHGKYGKPDILDAFDARLTWHALFKTYHNALFEQA
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKLYKSLPTFA
HHHHHHCCCCC
>Mature Secondary Structure 
SISYLNNLNWSDWTREERFFCSCLYEQVNSDPAALVRLINSETSLNLKENVYWDIGYEV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEEECCCEE
CLYRDYQWHRASSPIGASQYSQKRTFDLCLFSEDTIVIIEAKAFGRFSEEDGNKLARDRK
EEEECCCHHCCCCCCCCHHHHCCCCEEEEEECCCEEEEEEEHHCCCCCCCCCHHHHHHHH
QIPELLAKPNLKVCTVALASSIYFENHGKYGKPDILDAFDARLTWHALFKTYHNALFEQA
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKLYKSLPTFA
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA