| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119775479
Identifier: 119775479
GI number: 119775479
Start: 2812580
End: 2812825
Strand: Reverse
Name: 119775479
Synonym: Sama_2344
Alternate gene names: NA
Gene position: 2812825-2812580 (Counterclockwise)
Preceding gene: 119775481
Following gene: 119775476
Centisome position: 65.32
GC content: 49.19
Gene sequence:
>246_bases ATGCTGGGAGAAAACCACCTTCTTTCCAATGAGTTCCCCGATTACAGTGAGCTTATCCAAAGTCTTAAGTCCAGTGACAG CGAATTCAGTGCCAAGGCCAGACGCTATCACGAGCTGGACCATAAGATCCGTGGTCTGGAGGTCAATAAAGTGCCCACCA CAGATGAACACTTCTCAGCCCTCAAGCTCGAGCGCGCCGAGTTGAAAGATAAAATTTATCATACCCTCAAGGCTCACACA GGCTGA
Upstream 100 bases:
>100_bases TGTACGATTTTTGTGCTGTTATCTCATTTGGGCCCGGAGGGCCAAACCAAGTGGACAGCATATTGAACCACACTTTTCAT CCACCCATATGGAGGTCATC
Downstream 100 bases:
>100_bases GTCGCGAGTTGAGCCTGCGCGCTTCTTTGCATCAGCAGGCGATACATCACAGGTACCCAAACCAACGACAACAGGGTTGT CAGCACGGTTCCTCCGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MLGENHLLSNEFPDYSELIQSLKSSDSEFSAKARRYHELDHKIRGLEVNKVPTTDEHFSALKLERAELKDKIYHTLKAHT G
Sequences:
>Translated_81_residues MLGENHLLSNEFPDYSELIQSLKSSDSEFSAKARRYHELDHKIRGLEVNKVPTTDEHFSALKLERAELKDKIYHTLKAHT G >Mature_81_residues MLGENHLLSNEFPDYSELIQSLKSSDSEFSAKARRYHELDHKIRGLEVNKVPTTDEHFSALKLERAELKDKIYHTLKAHT G
Specific function: Unknown
COG id: COG2841
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9366; Mature: 9366
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGENHLLSNEFPDYSELIQSLKSSDSEFSAKARRYHELDHKIRGLEVNKVPTTDEHFSA CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH LKLERAELKDKIYHTLKAHTG HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLGENHLLSNEFPDYSELIQSLKSSDSEFSAKARRYHELDHKIRGLEVNKVPTTDEHFSA CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH LKLERAELKDKIYHTLKAHTG HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA