| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is cutF [C]
Identifier: 119775369
GI number: 119775369
Start: 2698333
End: 2698941
Strand: Direct
Name: cutF [C]
Synonym: Sama_2234
Alternate gene names: 119775369
Gene position: 2698333-2698941 (Clockwise)
Preceding gene: 119775363
Following gene: 119775401
Centisome position: 62.66
GC content: 51.89
Gene sequence:
>609_bases ATGTTTAGCATCGGAAAACATAGCGACTTCACCCCATCCTGCGTATCGCGTATGCTGGGTGATCTCCACTTTGTTAATCA GGGTACAGCCATGAAATTCTCCCGCTATTTTTTCAGCTTACTCACGACACTGCCGCTGTTGGCCTGCACTCAGGTAGAAG CCCCAGTTCCAGAGGCGCTTTCGCAATCAACAGGTCACACTGCTGGGGCGGCACAACCTCAGGAAAGCGTAATCGGCGGA TCCCTGCCCATTGGAGACAGCAGCCGTACTTCGCTTGATTGGCAAGGCAGCTATGAAGGCGTGGTTCCCTGCGCCAGTTG TGAAGGTATCAAAACCCGACTGACATTGAATAACGATGGAACTTACCTGCTGCAAAGCCAATATCTGGGCAAAGAACAGG ATGGTAAAGAACCCAAGGTTTTTGAGGAGCAAGGCAAGTTCAGCTGGAATGCCAGCGGTGGTGCCATCCAGCTTGAAAAC GGCGCCTGGTATCAGGTAGGAGAGAATCAACTGTTTATGCTGGACAGGGAAGGAAAGCGCATAACAGGCGTTCTGGCAGG GCACTATCGCCTGCTGAAAAAGCAGAGCGCTTTGCTGCCTAGATTCTAG
Upstream 100 bases:
>100_bases AGTTGTCACAGCTCAGTTTCGAGATGAGTGCCCATCTTTTATTGTCTGCTCATCACGGCTCTCAAGCTCAGGTACCGGGC CTCTGTGAGGGCATACTTGC
Downstream 100 bases:
>100_bases ATTCTAGATTCTAGATTCTAGAAGCAGTGTTTACTCTGCGCCCCAGATACACTAAGTGTCGACCGAAAAGCGTCTTGGCA GCCCGCTTGCGGCGTTATCA
Product: lipoprotein NlpE involved in copper resistance
Products: NA
Alternate protein names: Copper Resistance Lipoprotein NlpE; Copper Homeostasis Protein CutF; Lipoprotein NlpE Involved In Copper Resistance
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MFSIGKHSDFTPSCVSRMLGDLHFVNQGTAMKFSRYFFSLLTTLPLLACTQVEAPVPEALSQSTGHTAGAAQPQESVIGG SLPIGDSSRTSLDWQGSYEGVVPCASCEGIKTRLTLNNDGTYLLQSQYLGKEQDGKEPKVFEEQGKFSWNASGGAIQLEN GAWYQVGENQLFMLDREGKRITGVLAGHYRLLKKQSALLPRF
Sequences:
>Translated_202_residues MFSIGKHSDFTPSCVSRMLGDLHFVNQGTAMKFSRYFFSLLTTLPLLACTQVEAPVPEALSQSTGHTAGAAQPQESVIGG SLPIGDSSRTSLDWQGSYEGVVPCASCEGIKTRLTLNNDGTYLLQSQYLGKEQDGKEPKVFEEQGKFSWNASGGAIQLEN GAWYQVGENQLFMLDREGKRITGVLAGHYRLLKKQSALLPRF >Mature_202_residues MFSIGKHSDFTPSCVSRMLGDLHFVNQGTAMKFSRYFFSLLTTLPLLACTQVEAPVPEALSQSTGHTAGAAQPQESVIGG SLPIGDSSRTSLDWQGSYEGVVPCASCEGIKTRLTLNNDGTYLLQSQYLGKEQDGKEPKVFEEQGKFSWNASGGAIQLEN GAWYQVGENQLFMLDREGKRITGVLAGHYRLLKKQSALLPRF
Specific function: Involved In Copper Homeostasis. Could Be Involved In Both Copper Efflux And The Delivery Of Copper To Copper-Dependent Enzymes. [C]
COG id: COG3015
COG function: function code MP; Uncharacterized lipoprotein NlpE involved in copper resistance
Gene ontology:
Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786390, Length=104, Percent_Identity=37.5, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22072; Mature: 22072
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSIGKHSDFTPSCVSRMLGDLHFVNQGTAMKFSRYFFSLLTTLPLLACTQVEAPVPEAL CCCCCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH SQSTGHTAGAAQPQESVIGGSLPIGDSSRTSLDWQGSYEGVVPCASCEGIKTRLTLNNDG HHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCC TYLLQSQYLGKEQDGKEPKVFEEQGKFSWNASGGAIQLENGAWYQVGENQLFMLDREGKR CEEEECCCCCCCCCCCCCCHHHHCCCEEECCCCCEEEECCCCEEEECCCEEEEEECCCCE ITGVLAGHYRLLKKQSALLPRF EEEEHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFSIGKHSDFTPSCVSRMLGDLHFVNQGTAMKFSRYFFSLLTTLPLLACTQVEAPVPEAL CCCCCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH SQSTGHTAGAAQPQESVIGGSLPIGDSSRTSLDWQGSYEGVVPCASCEGIKTRLTLNNDG HHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCC TYLLQSQYLGKEQDGKEPKVFEEQGKFSWNASGGAIQLENGAWYQVGENQLFMLDREGKR CEEEECCCCCCCCCCCCCCHHHHCCCEEECCCCCEEEECCCCEEEECCCEEEEEECCCCE ITGVLAGHYRLLKKQSALLPRF EEEEHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA