| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is phhA [H]
Identifier: 119775357
GI number: 119775357
Start: 2685807
End: 2686598
Strand: Reverse
Name: phhA [H]
Synonym: Sama_2222
Alternate gene names: 119775357
Gene position: 2686598-2685807 (Counterclockwise)
Preceding gene: 119775364
Following gene: 119775356
Centisome position: 62.39
GC content: 52.53
Gene sequence:
>792_bases ATGAGTACACAGTATGTTGCCCGCAAACCTGATGCGCACGGCGTAATTGCCTATCCGGATCAGGAAAACGAAATTTGGGC AGAGCTTTATGCACGTCAGGCAGTGAATCTGCCCGGACGTGCCTGTCAGGAATATCTGGATGGCCTGGAGCGTCTGGCGC TGCCCAAGGATCGTGTGCCACAACTGGCTGAAGTTGATGAGGTGCTGCTGGATACCACTGGCTGGAAAACGGCGGCGGTG CCGGCGCTGATTTCTTTTGAGCGCTTTTTCGAACTGCTGGCGAGCCGTCAGTTTCCCGTGGCCACCTTTATCCGCAGCCG GGAAGAGTTTGATTATCTGCAAGAGCCGGATATTTTTCATGAAATCTTTGGTCATTGCCCACTGCTGACCAATCCCGCCT TTGCCAATTTTTCCCACATCTATGGCAAGCTGGGCCTGGCGGCCACCAAAGAGGAACGGGTGTATTTGGCCAGACTCTAT TGGTTTACCGTGGAATTTGGCCTCCTGAAGCCAAGGGATGGTGAGCTGCGTATCTACGGTGGCGGCATCCTGAGTTCACC CGGCGAAACGCTGTATGCCATGGGTGATAAACCCTTGAGAAAACCGTTTGATTTGCTGGATGTGCTGCGGACACCCTATC GTATTGATATTATGCAGCCCGTCTATTTTGAAATTGAACATATTGATTTCCTTGATGAGATTGCCCGTATGGACATCATG CAATCCGTCACCCGAGCCAGACAACTAGGGCTGCATGCCCCCTTGTTTGAGCCCAAGGCCAAGGCCGTTTAA
Upstream 100 bases:
>100_bases TTGCTAGCAGAGGACGCAGGAATAAAACGTGAGGCAGTTAACAAAAATCCGCCCTTGGAACACTATTGGGGGGTTGAAGT TAACCTGAAGTGAACCCGAG
Downstream 100 bases:
>100_bases ATAAATAGAAGAATTACAGGAGCAGTAATGAGCGAATTAGCATCCATGAAGTGCGAAGCCTGCCAGGCTGATGCCCCCAA GGTCACTGACGCCGAACTGG
Product: phenylalanine 4-monooxygenase
Products: NA
Alternate protein names: PAH; Phe-4-monooxygenase [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSTQYVARKPDAHGVIAYPDQENEIWAELYARQAVNLPGRACQEYLDGLERLALPKDRVPQLAEVDEVLLDTTGWKTAAV PALISFERFFELLASRQFPVATFIRSREEFDYLQEPDIFHEIFGHCPLLTNPAFANFSHIYGKLGLAATKEERVYLARLY WFTVEFGLLKPRDGELRIYGGGILSSPGETLYAMGDKPLRKPFDLLDVLRTPYRIDIMQPVYFEIEHIDFLDEIARMDIM QSVTRARQLGLHAPLFEPKAKAV
Sequences:
>Translated_263_residues MSTQYVARKPDAHGVIAYPDQENEIWAELYARQAVNLPGRACQEYLDGLERLALPKDRVPQLAEVDEVLLDTTGWKTAAV PALISFERFFELLASRQFPVATFIRSREEFDYLQEPDIFHEIFGHCPLLTNPAFANFSHIYGKLGLAATKEERVYLARLY WFTVEFGLLKPRDGELRIYGGGILSSPGETLYAMGDKPLRKPFDLLDVLRTPYRIDIMQPVYFEIEHIDFLDEIARMDIM QSVTRARQLGLHAPLFEPKAKAV >Mature_262_residues STQYVARKPDAHGVIAYPDQENEIWAELYARQAVNLPGRACQEYLDGLERLALPKDRVPQLAEVDEVLLDTTGWKTAAVP ALISFERFFELLASRQFPVATFIRSREEFDYLQEPDIFHEIFGHCPLLTNPAFANFSHIYGKLGLAATKEERVYLARLYW FTVEFGLLKPRDGELRIYGGGILSSPGETLYAMGDKPLRKPFDLLDVLRTPYRIDIMQPVYFEIEHIDFLDEIARMDIMQ SVTRARQLGLHAPLFEPKAKAV
Specific function: Unknown
COG id: COG3186
COG function: function code E; Phenylalanine-4-hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biopterin-dependent aromatic amino acid hydroxylase family [H]
Homologues:
Organism=Homo sapiens, GI31795563, Length=234, Percent_Identity=36.3247863247863, Blast_Score=135, Evalue=4e-32, Organism=Homo sapiens, GI88900503, Length=215, Percent_Identity=37.6744186046512, Blast_Score=133, Evalue=1e-31, Organism=Homo sapiens, GI88900505, Length=215, Percent_Identity=37.6744186046512, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI88900501, Length=215, Percent_Identity=37.6744186046512, Blast_Score=132, Evalue=2e-31, Organism=Homo sapiens, GI4759248, Length=225, Percent_Identity=35.5555555555556, Blast_Score=131, Evalue=7e-31, Organism=Homo sapiens, GI4557819, Length=225, Percent_Identity=35.1111111111111, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17531391, Length=213, Percent_Identity=40.8450704225352, Blast_Score=142, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71980736, Length=231, Percent_Identity=33.3333333333333, Blast_Score=133, Evalue=1e-31, Organism=Caenorhabditis elegans, GI115532103, Length=236, Percent_Identity=29.2372881355932, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI115533973, Length=236, Percent_Identity=29.2372881355932, Blast_Score=104, Evalue=6e-23, Organism=Caenorhabditis elegans, GI71980731, Length=155, Percent_Identity=29.6774193548387, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI17136774, Length=215, Percent_Identity=35.8139534883721, Blast_Score=134, Evalue=8e-32, Organism=Drosophila melanogaster, GI17136776, Length=215, Percent_Identity=35.8139534883721, Blast_Score=134, Evalue=9e-32, Organism=Drosophila melanogaster, GI24660393, Length=212, Percent_Identity=35.8490566037736, Blast_Score=128, Evalue=4e-30, Organism=Drosophila melanogaster, GI62472054, Length=212, Percent_Identity=35.8490566037736, Blast_Score=128, Evalue=4e-30, Organism=Drosophila melanogaster, GI24654994, Length=193, Percent_Identity=36.2694300518135, Blast_Score=108, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001273 - InterPro: IPR018301 - InterPro: IPR019774 - InterPro: IPR005960 [H]
Pfam domain/function: PF00351 Biopterin_H [H]
EC number: =1.14.16.1 [H]
Molecular weight: Translated: 30140; Mature: 30009
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00367 BIOPTERIN_HYDROXYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQYVARKPDAHGVIAYPDQENEIWAELYARQAVNLPGRACQEYLDGLERLALPKDRVP CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHCCC QLAEVDEVLLDTTGWKTAAVPALISFERFFELLASRQFPVATFIRSREEFDYLQEPDIFH CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHH EIFGHCPLLTNPAFANFSHIYGKLGLAATKEERVYLARLYWFTVEFGLLKPRDGELRIYG HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE GGILSSPGETLYAMGDKPLRKPFDLLDVLRTPYRIDIMQPVYFEIEHIDFLDEIARMDIM CCEECCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH QSVTRARQLGLHAPLFEPKAKAV HHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure STQYVARKPDAHGVIAYPDQENEIWAELYARQAVNLPGRACQEYLDGLERLALPKDRVP CCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHCCC QLAEVDEVLLDTTGWKTAAVPALISFERFFELLASRQFPVATFIRSREEFDYLQEPDIFH CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHH EIFGHCPLLTNPAFANFSHIYGKLGLAATKEERVYLARLYWFTVEFGLLKPRDGELRIYG HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE GGILSSPGETLYAMGDKPLRKPFDLLDVLRTPYRIDIMQPVYFEIEHIDFLDEIARMDIM CCEECCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH QSVTRARQLGLHAPLFEPKAKAV HHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8108417; 10984043 [H]