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The map label for this gene is yiaM [C]

Identifier: 119775345

GI number: 119775345

Start: 2671170

End: 2671811

Strand: Direct

Name: yiaM [C]

Synonym: Sama_2210

Alternate gene names: 119775345

Gene position: 2671170-2671811 (Clockwise)

Preceding gene: 119775344

Following gene: 119775346

Centisome position: 62.03

GC content: 49.07

Gene sequence:

>642_bases
GTGATTTCTCGTATTTTTGGTTACTTTGAAGAAGGCGTACTTAACCTTCTTATCACCCTCATGACACTGCTGGTATTCAT
GGAGGTCATTGCCCGATTCTTCTTTAATACCGGCTTTTTGTGGATCCAGGAGCTGACCCTCACCTTTTGTGGCTGGTTTG
TTCTCTTTGGCATGTCTTATGGCATCAAGGTCGGCGCCCATATCGGTGTGGATGCCTTCGTCAAAAAACTCAAGCCTGGT
GCCAGGCGCATTTCGGCGTTGCTTGCCGTGAGTATCTGCCTGATTTATTGCGCCATGTTCCTCAAGGGCACCTGGGATTA
CCTGTCGCAGATTTATCACATCGGCATTGGCATGGAAGATTTGGACGTACCCTCAGTGTTAATGAAACAAATGAGCGAAG
ACTTTGCCTGGGATGTGATGCGCATCGACCCCGAAGACCCCGCAATTCCCCTTTGGATAAGCCAAAGTATTCTGCTGCTT
GGGTTTGTGATGTTGACCTGGCGCTTTCTTGAACTGGCAGTGGCCATTTTTCGTGGCACTTCCAACGGTTTCAGCTTCCA
TGATGAGGCCAAAGAAAGTATGCACCTGGCTGATGAACAGTCCGGCGCCAACGACAATAACAATGACGGAGCCAAGTCAT
GA

Upstream 100 bases:

>100_bases
GTAAACCCGTTTGGGGCACCAAGGTGCCCCGCTTTTGTTACTCAATAACCAGGGATGACGCTGCCACAGGGACGGTGCAG
ATATTCCGGGGAGAGCATCA

Downstream 100 bases:

>100_bases
CCATAGCCACGCTGTTTTTAACCCTGTTCCTGTGCATGCTGCTCGGTATGCCCATCGCCATCGCGCTGGGATTTTCGAGC
ATGCTGACCATATTGCTGTT

Product: C4-dicarboxylate transporter

Products: NA

Alternate protein names: Trap Transporter Dctq Subunit; C4-Dicarboxylate Transporter; C4-Dicarboxylate Transport Protein DctQ; Dicarboxylate Transporter; C4-Dicarboxylate Transporter Small Permease Component; Transporter-Like Membrane Protein; TRAP-Type C4-Dicarboxylate Transporter Small Permease; TRAP Transporter DctQ-Like Membrane Protein; TRAP Transporter DctQ Subunit

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MISRIFGYFEEGVLNLLITLMTLLVFMEVIARFFFNTGFLWIQELTLTFCGWFVLFGMSYGIKVGAHIGVDAFVKKLKPG
ARRISALLAVSICLIYCAMFLKGTWDYLSQIYHIGIGMEDLDVPSVLMKQMSEDFAWDVMRIDPEDPAIPLWISQSILLL
GFVMLTWRFLELAVAIFRGTSNGFSFHDEAKESMHLADEQSGANDNNNDGAKS

Sequences:

>Translated_213_residues
MISRIFGYFEEGVLNLLITLMTLLVFMEVIARFFFNTGFLWIQELTLTFCGWFVLFGMSYGIKVGAHIGVDAFVKKLKPG
ARRISALLAVSICLIYCAMFLKGTWDYLSQIYHIGIGMEDLDVPSVLMKQMSEDFAWDVMRIDPEDPAIPLWISQSILLL
GFVMLTWRFLELAVAIFRGTSNGFSFHDEAKESMHLADEQSGANDNNNDGAKS
>Mature_213_residues
MISRIFGYFEEGVLNLLITLMTLLVFMEVIARFFFNTGFLWIQELTLTFCGWFVLFGMSYGIKVGAHIGVDAFVKKLKPG
ARRISALLAVSICLIYCAMFLKGTWDYLSQIYHIGIGMEDLDVPSVLMKQMSEDFAWDVMRIDPEDPAIPLWISQSILLL
GFVMLTWRFLELAVAIFRGTSNGFSFHDEAKESMHLADEQSGANDNNNDGAKS

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24079; Mature: 24079

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRIFGYFEEGVLNLLITLMTLLVFMEVIARFFFNTGFLWIQELTLTFCGWFVLFGMSY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GIKVGAHIGVDAFVKKLKPGARRISALLAVSICLIYCAMFLKGTWDYLSQIYHIGIGMED
CHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
LDVPSVLMKQMSEDFAWDVMRIDPEDPAIPLWISQSILLLGFVMLTWRFLELAVAIFRGT
CCHHHHHHHHHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SNGFSFHDEAKESMHLADEQSGANDNNNDGAKS
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MISRIFGYFEEGVLNLLITLMTLLVFMEVIARFFFNTGFLWIQELTLTFCGWFVLFGMSY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GIKVGAHIGVDAFVKKLKPGARRISALLAVSICLIYCAMFLKGTWDYLSQIYHIGIGMED
CHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
LDVPSVLMKQMSEDFAWDVMRIDPEDPAIPLWISQSILLLGFVMLTWRFLELAVAIFRGT
CCHHHHHHHHHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SNGFSFHDEAKESMHLADEQSGANDNNNDGAKS
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA