| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is ogt [H]
Identifier: 119775339
GI number: 119775339
Start: 2661775
End: 2662314
Strand: Reverse
Name: ogt [H]
Synonym: Sama_2204
Alternate gene names: 119775339
Gene position: 2662314-2661775 (Counterclockwise)
Preceding gene: 119775340
Following gene: 119775338
Centisome position: 61.83
GC content: 57.59
Gene sequence:
>540_bases ATGATGCGAATCGCCAATAATAGTTGCAAACTGCACGCACCCGCGCCGATGGCGGCGACTTGTACGCTGGAAAGTCCAGT GGGCACCCTGTGGCTGGGGGCGAGCGAGAATGGCTTAATGACGCTCAAAGCCGCTCCCTTTAACGATGTGCCAGTGTATC ACTCAGAGCAAGCCGTCACCCGGGCAAAAGGACATTTACAGGCGGCATGCTCGCAACTTGCCGAGTTTTTTGAAGGTAAG CGCCATCAGTTTGATTTGGCGCTCGCCCCCAAAGGGACCGAGTTTCAGCGGGCCGTGTGGCAGGCGCTGCTCACCCTTCC CTGGGGCGAAACGGCCAGTTATTCGGATATAGCCCTTCAAATCGCCAGGCCAAAGGCGGTGCGGGCCGTTGGGGCGGCCA ATGGCGCCAATCCGGTGGCAATCATCATTCCTTGCCACCGAGTGATAGGTAAGGGCGGGGCTCTGACTGGCTATGCATGG GGATTGAAAATGAAGGCGAGTCTGCTCAAACTCGAATCGGCAATACCTTCGCTGCGTTGA
Upstream 100 bases:
>100_bases CTGACGATATATCAAGCCGATTTTACGCGAAGCAATAACCGGCCAAAGATAACCGTTTTGAGCGGCCCCCTGGAAACCCA TTAATTCATAAAGAGGCACC
Downstream 100 bases:
>100_bases TCCCGTCGATAAAAATACTGCGCTCAATCAAGTCCCGCCGAGCCCAGCCTCTGGCATAATGAGCTAAATAACCTCAGAGG GGACTTGCATGAAACACCTG
Product: methylated-DNA--(protein)-cysteine S-methyltransferase
Products: NA
Alternate protein names: 6-O-methylguanine-DNA methyltransferase; MGMT; O-6-methylguanine-DNA-alkyltransferase [H]
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MMRIANNSCKLHAPAPMAATCTLESPVGTLWLGASENGLMTLKAAPFNDVPVYHSEQAVTRAKGHLQAACSQLAEFFEGK RHQFDLALAPKGTEFQRAVWQALLTLPWGETASYSDIALQIARPKAVRAVGAANGANPVAIIIPCHRVIGKGGALTGYAW GLKMKASLLKLESAIPSLR
Sequences:
>Translated_179_residues MMRIANNSCKLHAPAPMAATCTLESPVGTLWLGASENGLMTLKAAPFNDVPVYHSEQAVTRAKGHLQAACSQLAEFFEGK RHQFDLALAPKGTEFQRAVWQALLTLPWGETASYSDIALQIARPKAVRAVGAANGANPVAIIIPCHRVIGKGGALTGYAW GLKMKASLLKLESAIPSLR >Mature_179_residues MMRIANNSCKLHAPAPMAATCTLESPVGTLWLGASENGLMTLKAAPFNDVPVYHSEQAVTRAKGHLQAACSQLAEFFEGK RHQFDLALAPKGTEFQRAVWQALLTLPWGETASYSDIALQIARPKAVRAVGAANGANPVAIIIPCHRVIGKGGALTGYAW GLKMKASLLKLESAIPSLR
Specific function: Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a sui
COG id: COG0350
COG function: function code L; Methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MGMT family [H]
Homologues:
Organism=Homo sapiens, GI197304670, Length=162, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1787596, Length=165, Percent_Identity=38.7878787878788, Blast_Score=111, Evalue=3e-26, Organism=Escherichia coli, GI1788542, Length=88, Percent_Identity=56.8181818181818, Blast_Score=104, Evalue=3e-24, Organism=Caenorhabditis elegans, GI115533068, Length=82, Percent_Identity=52.4390243902439, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI115533070, Length=82, Percent_Identity=52.4390243902439, Blast_Score=88, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6320001, Length=81, Percent_Identity=48.1481481481481, Blast_Score=93, Evalue=2e-20, Organism=Drosophila melanogaster, GI17137554, Length=99, Percent_Identity=43.4343434343434, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF01035 DNA_binding_1; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 19074; Mature: 19074
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS00374 MGMT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRIANNSCKLHAPAPMAATCTLESPVGTLWLGASENGLMTLKAAPFNDVPVYHSEQAVT CCEECCCCCEEECCCCCEEEEEECCCCCEEEECCCCCCEEEEEECCCCCCCCEECCHHHH RAKGHLQAACSQLAEFFEGKRHQFDLALAPKGTEFQRAVWQALLTLPWGETASYSDIALQ HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEE IARPKAVRAVGAANGANPVAIIIPCHRVIGKGGALTGYAWGLKMKASLLKLESAIPSLR EECCHHHEEECCCCCCCCEEEEEECHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMRIANNSCKLHAPAPMAATCTLESPVGTLWLGASENGLMTLKAAPFNDVPVYHSEQAVT CCEECCCCCEEECCCCCEEEEEECCCCCEEEECCCCCCEEEEEECCCCCCCCEECCHHHH RAKGHLQAACSQLAEFFEGKRHQFDLALAPKGTEFQRAVWQALLTLPWGETASYSDIALQ HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEE IARPKAVRAVGAANGANPVAIIIPCHRVIGKGGALTGYAWGLKMKASLLKLESAIPSLR EECCHHHEEECCCCCCCCEEEEEECHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA