| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is cheV [H]
Identifier: 119775336
GI number: 119775336
Start: 2658745
End: 2659644
Strand: Reverse
Name: cheV [H]
Synonym: Sama_2201
Alternate gene names: 119775336
Gene position: 2659644-2658745 (Counterclockwise)
Preceding gene: 119775337
Following gene: 119775335
Centisome position: 61.76
GC content: 54.11
Gene sequence:
>900_bases ATGAAGAGTAAAGCCAATCAATCCCAGGGTCTGCTGCTGTTTCATTTGAGTCGCTCGCAGCTGTTTGCCATCGGTACCCT GAAAATCCGTGAGCTGGTGCCTTACACCCAGCTTAATGCACTGCCCCAGTCACATCCCGCGGTGATGGGTACAGCTACCG TACGCGGCCAGACCATTTCCGTTATCGACATGGCCGCCGCCGTAGGCTATCCGCCGGTGACCGACGAAGAGCGCAGCAAG TGTTTTATCATCATCACCGATTGCCAGCGGATGTTGATAGGTTTTTTGGTGCGTGGCATAGATAAAATCATCGAGTGTAA CTGGCGCGATATTCTGTCACCGCCCGACAATCTGGGCCGGAATGCCTTTTTAACCGGTGTCACCCGCTATCAGGATAAGC TCGTCCAATTACTCGATGTTGAGCTGCTGCTGTCGAAAATCTTCCCCATCAAGGAAGACAAACGCATAGGTATTCTCACC GATGTGCAGCGTGAGCAGCTCAAACCCATGAATATTCTGCTGGTGGACGACTCCAAGGTGGCGCGAAAGCAGCTTTCCGA TGCCCTTGATGCCATCAATATCAGTTACCGAGTGGCGTCAAACGGCCGGGATGCCTTGTCCATGATGACTCAGAGCGCCG ATGACAAGCGGCCGGTGGACATTCTGGTCAGTGACATTGAGATGCCGGGCCTGGATGGCTACGAATTGGCGTTTGAAGTG AAAAATGATACGGCGCTGGCCGCTGCTTACATCATTTTGCACACGTCGCTCTCCAGTGAAATCAGTGTCAGCCAAGCCAA GCAGGTAGGGGCCGATGAGGCCCTGACCAAGTTTGATGCCCAGGAGCTGATTGCCGCCATGCTCAGGGGCGTAGAGCGCA GGGCCGGATCACAGAGTTGA
Upstream 100 bases:
>100_bases TTTATGCCGAGCCCCAGGCCGGATTTTGGCGCCGCTTTATGGCCGATGTGCTGGCGCTGTTTCCACTGGAATCCCAGCTT TAATCCTGTGAAGGGGAACT
Downstream 100 bases:
>100_bases TGTTTTTGTTGACGATGTGAAAGCAATTCGACCACTGCACCCCCTCATACCGCCAAATGCAGAGCCTTTGCTGGACAAAG CCTCTGCTTTTCGATACAAC
Product: chemotaxis protein CheV
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MKSKANQSQGLLLFHLSRSQLFAIGTLKIRELVPYTQLNALPQSHPAVMGTATVRGQTISVIDMAAAVGYPPVTDEERSK CFIIITDCQRMLIGFLVRGIDKIIECNWRDILSPPDNLGRNAFLTGVTRYQDKLVQLLDVELLLSKIFPIKEDKRIGILT DVQREQLKPMNILLVDDSKVARKQLSDALDAINISYRVASNGRDALSMMTQSADDKRPVDILVSDIEMPGLDGYELAFEV KNDTALAAAYIILHTSLSSEISVSQAKQVGADEALTKFDAQELIAAMLRGVERRAGSQS
Sequences:
>Translated_299_residues MKSKANQSQGLLLFHLSRSQLFAIGTLKIRELVPYTQLNALPQSHPAVMGTATVRGQTISVIDMAAAVGYPPVTDEERSK CFIIITDCQRMLIGFLVRGIDKIIECNWRDILSPPDNLGRNAFLTGVTRYQDKLVQLLDVELLLSKIFPIKEDKRIGILT DVQREQLKPMNILLVDDSKVARKQLSDALDAINISYRVASNGRDALSMMTQSADDKRPVDILVSDIEMPGLDGYELAFEV KNDTALAAAYIILHTSLSSEISVSQAKQVGADEALTKFDAQELIAAMLRGVERRAGSQS >Mature_299_residues MKSKANQSQGLLLFHLSRSQLFAIGTLKIRELVPYTQLNALPQSHPAVMGTATVRGQTISVIDMAAAVGYPPVTDEERSK CFIIITDCQRMLIGFLVRGIDKIIECNWRDILSPPDNLGRNAFLTGVTRYQDKLVQLLDVELLLSKIFPIKEDKRIGILT DVQREQLKPMNILLVDDSKVARKQLSDALDAINISYRVASNGRDALSMMTQSADDKRPVDILVSDIEMPGLDGYELAFEV KNDTALAAAYIILHTSLSSEISVSQAKQVGADEALTKFDAQELIAAMLRGVERRAGSQS
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: 2.7.3.- [C]
Molecular weight: Translated: 32989; Mature: 32989
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKANQSQGLLLFHLSRSQLFAIGTLKIRELVPYTQLNALPQSHPAVMGTATVRGQTIS CCCCCCCCCCEEEEEECCCCEEEEEEEHHHHHCCHHHHHCCCCCCCCEEEEEEECCCEEH VIDMAAAVGYPPVTDEERSKCFIIITDCQRMLIGFLVRGIDKIIECNWRDILSPPDNLGR HHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHCCC NAFLTGVTRYQDKLVQLLDVELLLSKIFPIKEDKRIGILTDVQREQLKPMNILLVDDSKV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHCCCCEEEEECCCHH ARKQLSDALDAINISYRVASNGRDALSMMTQSADDKRPVDILVSDIEMPGLDGYELAFEV HHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEE KNDTALAAAYIILHTSLSSEISVSQAKQVGADEALTKFDAQELIAAMLRGVERRAGSQS CCCHHHHHHHHHHEECCCCCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKSKANQSQGLLLFHLSRSQLFAIGTLKIRELVPYTQLNALPQSHPAVMGTATVRGQTIS CCCCCCCCCCEEEEEECCCCEEEEEEEHHHHHCCHHHHHCCCCCCCCEEEEEEECCCEEH VIDMAAAVGYPPVTDEERSKCFIIITDCQRMLIGFLVRGIDKIIECNWRDILSPPDNLGR HHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHCCC NAFLTGVTRYQDKLVQLLDVELLLSKIFPIKEDKRIGILTDVQREQLKPMNILLVDDSKV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHCCCCEEEEECCCHH ARKQLSDALDAINISYRVASNGRDALSMMTQSADDKRPVDILVSDIEMPGLDGYELAFEV HHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEE KNDTALAAAYIILHTSLSSEISVSQAKQVGADEALTKFDAQELIAAMLRGVERRAGSQS CCCHHHHHHHHHHEECCCCCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Phosphotransferases with a nitrogenous group as acceptor [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]