| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119775314
Identifier: 119775314
GI number: 119775314
Start: 2636457
End: 2636834
Strand: Direct
Name: 119775314
Synonym: Sama_2179
Alternate gene names: NA
Gene position: 2636457-2636834 (Clockwise)
Preceding gene: 119775313
Following gene: 119775315
Centisome position: 61.23
GC content: 54.5
Gene sequence:
>378_bases ATGGCAAAGGTGATTGGCTTGGGCGGTGTCTTCTTCAAGAGTGCAGATCCCGAAGCACTGGCAAACTGGTACAAGACTCA CTTGGGTATGCCGGTGGAGCATTGGGGAGGCTGTGCCTTCAGGGCACTGGACTTGCCTAAAGGCAGTTACAGTGTCTGGA GTCCGTTTGCGGCTGGCAGCGACTATTTTCACCCCTCCCGCCATCCCTTTATGTTTAATTTGGTTGTGGACGACCTAGAG GCAGTGCTGGCCCAGGCTGCAGCTGGTGGGGCCGAGGTGCTGCCCGGTCGGGAGGACACTGAATTTGGTCGTTTTGGTTG GTTTATCGATCCCGATGGCAATAAGGTGGAACTCTGGCAAATGAGTGTCAATTCGTAA
Upstream 100 bases:
>100_bases AGCACTGAAAAGGCCGCGATTATCGCGGCCTTTTTGTAACTGTCGTCTGCCTCACCTACCCTTAAAGCTGTATTTCAGCC AATGAAAGGGGAACAGGTTT
Downstream 100 bases:
>100_bases CTCAGTCACACTCTTGATGCAAAGCCTTGGCAATTTGCGTATTCTGGAGCGAAAACGCCGTTGAAACAGGAACTTTCATG GACAAGCCTCTTACTCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase; Glyoxalase Family Protein; Lactoylglutathione Lyase
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MAKVIGLGGVFFKSADPEALANWYKTHLGMPVEHWGGCAFRALDLPKGSYSVWSPFAAGSDYFHPSRHPFMFNLVVDDLE AVLAQAAAGGAEVLPGREDTEFGRFGWFIDPDGNKVELWQMSVNS
Sequences:
>Translated_125_residues MAKVIGLGGVFFKSADPEALANWYKTHLGMPVEHWGGCAFRALDLPKGSYSVWSPFAAGSDYFHPSRHPFMFNLVVDDLE AVLAQAAAGGAEVLPGREDTEFGRFGWFIDPDGNKVELWQMSVNS >Mature_124_residues AKVIGLGGVFFKSADPEALANWYKTHLGMPVEHWGGCAFRALDLPKGSYSVWSPFAAGSDYFHPSRHPFMFNLVVDDLEA VLAQAAAGGAEVLPGREDTEFGRFGWFIDPDGNKVELWQMSVNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13709; Mature: 13577
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVIGLGGVFFKSADPEALANWYKTHLGMPVEHWGGCAFRALDLPKGSYSVWSPFAAGS CCEEEECCEEEECCCCHHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCCCCCCCCCCCCC DYFHPSRHPFMFNLVVDDLEAVLAQAAAGGAEVLPGREDTEFGRFGWFIDPDGNKVELWQ CCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEE MSVNS EECCC >Mature Secondary Structure AKVIGLGGVFFKSADPEALANWYKTHLGMPVEHWGGCAFRALDLPKGSYSVWSPFAAGS CEEEECCEEEECCCCHHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCCCCCCCCCCCCC DYFHPSRHPFMFNLVVDDLEAVLAQAAAGGAEVLPGREDTEFGRFGWFIDPDGNKVELWQ CCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEE MSVNS EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA