Click here to switch to the map view.

The map label for this gene is 119775305

Identifier: 119775305

GI number: 119775305

Start: 2625343

End: 2626299

Strand: Direct

Name: 119775305

Synonym: Sama_2170

Alternate gene names: NA

Gene position: 2625343-2626299 (Clockwise)

Preceding gene: 119775304

Following gene: 119775306

Centisome position: 60.97

GC content: 58.2

Gene sequence:

>957_bases
ATGCGAGCCCCAAAATCAGAGCGTAAAGCCTCTGCACTGTCCCTGCCGCTCTTTGCCGATGGGGTGCATCTGGATACCCC
GGAGCTTTTGGCCTGCCAGGAGCTGGCCAGGGCACTGCCGGATGTGCGCAGTCAGGCCCGCGCCAGTATGGCTGGCCACA
GGGCCAGTCAAATCAAAGGCAGGGGGATGGAGTTTGCCGAAGTGCGCCAGTATCAGAAAGGCGATGATGTGCGCACTATC
GACTGGCGTGTTACCGCCCGCACCGGCAAGACACACACCAAACTCTTTGTGGAAGAGCGTGAACGCCCCGTGCTGCTTCT
GGTGGATTTAAGCCACAGCCTCTATTTTGGCTCCACCCTGATGCTGCAGGCAGTTCAGCTGTGTCATTTGGCCACAACCC
TCGGCTGGCGGGCCATAGGCCATGGCGATCGCATCGGCGCTCTTATCGCAAGCGAACATGAGCACCTGGAACTCAAGCCC
AGAAGCCGTAAATCCGGCATGTTGCAGCTCATCAGCGCGCTGACCGAAGTGCATCGTCATCAGTTAACCGCCTTTGATGC
GATGCCCAGAGACCCAGAGCATTTGCTGCGGGCCTGCCAGCGTCTGGAGCGTATCGCCAAACCCGGCTCACTGATTTGGC
TTTTGTCTGATGGCTCTGGCTTCAGCGAGTCCTGTGTCGGCCCACTGATGAACCTGAAACGCCACTGCGAGCTTGGCGCA
TTTCTGGTTACAGATCCTCTCCGTGATGGACGCCTTCCTCTGGCCGACAATCTGGCACTGCCGGTACGGGAAGCCGGCAA
AGAGAAACTACTCGACCGCAGAGGCTATCAGGCATGGCTTGAGCGGCAAAAGGAGCAGACCAGGGCGTTTGAACATCTCA
CTCTGCGGCTGGGCATCCCCCTGAAAACCATTGATTCGGGCCAACCTCTCTCGGCTCAATTGGACATATTGCGTTAA

Upstream 100 bases:

>100_bases
TGCTGCGCCACCGTTTGCTGCTCAGTTTCCGGGCGCAGGCCGAAGGTGTCAGTGCCGATGCGGTGATTGACCATATTTTG
TCACAGGTGGCTGTGCCCTG

Downstream 100 bases:

>100_bases
TAACATGATAAATCCTTCGGCAACTTCTGCAGGCAATCCAATGCTTGCACAAATGAAAGACATTCAGCTGCCGCCAGAGG
TGTCAGCCTGGCCACCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MRAPKSERKASALSLPLFADGVHLDTPELLACQELARALPDVRSQARASMAGHRASQIKGRGMEFAEVRQYQKGDDVRTI
DWRVTARTGKTHTKLFVEERERPVLLLVDLSHSLYFGSTLMLQAVQLCHLATTLGWRAIGHGDRIGALIASEHEHLELKP
RSRKSGMLQLISALTEVHRHQLTAFDAMPRDPEHLLRACQRLERIAKPGSLIWLLSDGSGFSESCVGPLMNLKRHCELGA
FLVTDPLRDGRLPLADNLALPVREAGKEKLLDRRGYQAWLERQKEQTRAFEHLTLRLGIPLKTIDSGQPLSAQLDILR

Sequences:

>Translated_318_residues
MRAPKSERKASALSLPLFADGVHLDTPELLACQELARALPDVRSQARASMAGHRASQIKGRGMEFAEVRQYQKGDDVRTI
DWRVTARTGKTHTKLFVEERERPVLLLVDLSHSLYFGSTLMLQAVQLCHLATTLGWRAIGHGDRIGALIASEHEHLELKP
RSRKSGMLQLISALTEVHRHQLTAFDAMPRDPEHLLRACQRLERIAKPGSLIWLLSDGSGFSESCVGPLMNLKRHCELGA
FLVTDPLRDGRLPLADNLALPVREAGKEKLLDRRGYQAWLERQKEQTRAFEHLTLRLGIPLKTIDSGQPLSAQLDILR
>Mature_318_residues
MRAPKSERKASALSLPLFADGVHLDTPELLACQELARALPDVRSQARASMAGHRASQIKGRGMEFAEVRQYQKGDDVRTI
DWRVTARTGKTHTKLFVEERERPVLLLVDLSHSLYFGSTLMLQAVQLCHLATTLGWRAIGHGDRIGALIASEHEHLELKP
RSRKSGMLQLISALTEVHRHQLTAFDAMPRDPEHLLRACQRLERIAKPGSLIWLLSDGSGFSESCVGPLMNLKRHCELGA
FLVTDPLRDGRLPLADNLALPVREAGKEKLLDRRGYQAWLERQKEQTRAFEHLTLRLGIPLKTIDSGQPLSAQLDILR

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.avium MAV169 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002881
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01882 DUF58 [H]

EC number: NA

Molecular weight: Translated: 35665; Mature: 35665

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPKSERKASALSLPLFADGVHLDTPELLACQELARALPDVRSQARASMAGHRASQIKG
CCCCCCHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RGMEFAEVRQYQKGDDVRTIDWRVTARTGKTHTKLFVEERERPVLLLVDLSHSLYFGSTL
CCCCHHHHHHHHCCCCEEEEEEEEEECCCCCHHHEEEECCCCCEEEEEECCCCHHHHHHH
MLQAVQLCHLATTLGWRAIGHGDRIGALIASEHEHLELKPRSRKSGMLQLISALTEVHRH
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHH
QLTAFDAMPRDPEHLLRACQRLERIAKPGSLIWLLSDGSGFSESCVGPLMNLKRHCELGA
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCE
FLVTDPLRDGRLPLADNLALPVREAGKEKLLDRRGYQAWLERQKEQTRAFEHLTLRLGIP
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEECCC
LKTIDSGQPLSAQLDILR
EEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MRAPKSERKASALSLPLFADGVHLDTPELLACQELARALPDVRSQARASMAGHRASQIKG
CCCCCCHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RGMEFAEVRQYQKGDDVRTIDWRVTARTGKTHTKLFVEERERPVLLLVDLSHSLYFGSTL
CCCCHHHHHHHHCCCCEEEEEEEEEECCCCCHHHEEEECCCCCEEEEEECCCCHHHHHHH
MLQAVQLCHLATTLGWRAIGHGDRIGALIASEHEHLELKPRSRKSGMLQLISALTEVHRH
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHH
QLTAFDAMPRDPEHLLRACQRLERIAKPGSLIWLLSDGSGFSESCVGPLMNLKRHCELGA
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCE
FLVTDPLRDGRLPLADNLALPVREAGKEKLLDRRGYQAWLERQKEQTRAFEHLTLRLGIP
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEECCC
LKTIDSGQPLSAQLDILR
EEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]