| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is yeaC [H]
Identifier: 119775304
GI number: 119775304
Start: 2624387
End: 2625343
Strand: Direct
Name: yeaC [H]
Synonym: Sama_2169
Alternate gene names: 119775304
Gene position: 2624387-2625343 (Clockwise)
Preceding gene: 119775300
Following gene: 119775305
Centisome position: 60.95
GC content: 56.32
Gene sequence:
>957_bases ATGCCTTTGAGCCGTTTTCAAGCCTTAAGAAAATACCTGAACACCCTGATTTTGGGTCAGCCTGTTCTCACGGAAAACCT GCTTATTGCGCTGGTAGCCAATGGTCACCTGTTGGTAGAAGGTCCACCGGGCCTGGCCAAGACCCGCGCAGTCAAAGCCT TGTGTGATGGGGTGGAGGGCGACTTTCATCGCATTCAGTTTACGCCGGATCTGCTGCCCGCTGATTTGACCGGTACCGAT ATCTACCGTGCCCAGACAGGCACCTTCGAATTTGAGTCCGGTCCTATCTTCCACAATCTTATCCTTGCCGATGAAATCAA CCGGGCGCCCGCCAAGGTACAATCGGCTCTGCTGGAAGCCATGGCCGAAGGTCAGGTCACTGTGGGCAAGAAGAGCTATA AACTGCCCAAATTCTTTTTGGTCATGGCCACCCAAAACCCGCTGGAAAACGAAGGCACCTACCCCCTGCCCGAGGCACAA CTCGACCGCTTTTTGATGCATCTGAATCTTGACTACCCCGATGCCCAAACCGAGAGGCTCATCCTTAAGTTGTCGCGAAA CGAGGCCCTGCAAGGCGAGTTGCCCTCGGTCGAGCCCATAGCGCAGGCAGACATCTTTGAGGCCCGTACAGAAGCTTTGG AGCTCTATCTGGCGGAGCCGCTGGAGCAATATATCGTCGACATCATCATGGCGACCCGTGAGGGCCATAAGTACAGCGAA GAGCTGGGCAACTGGCTCGATTATGGTGTCAGCCCCAGGGCCAGTCAGGCGCTGGAACGTTGTGCCCGCGCACGTGCTTG GCTCGATGGTCGCGATTTTGTGTCACCGGAAGACATTCAGGCCGTCGCCCCCAATGTGCTGCGCCACCGTTTGCTGCTCA GTTTCCGGGCGCAGGCCGAAGGTGTCAGTGCCGATGCGGTGATTGACCATATTTTGTCACAGGTGGCTGTGCCCTGA
Upstream 100 bases:
>100_bases TAAACACTTGTTTGCATTTTTGCCACTAGCCAAGGGGTAAGGGAATTTTTTACCATAGGGGATGTCTCAAGCTTATCAAT AGAATAAATCGAGTTGCATC
Downstream 100 bases:
>100_bases TGCGAGCCCCAAAATCAGAGCGTAAAGCCTCTGCACTGTCCCTGCCGCTCTTTGCCGATGGGGTGCATCTGGATACCCCG GAGCTTTTGGCCTGCCAGGA
Product: MoxR domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MPLSRFQALRKYLNTLILGQPVLTENLLIALVANGHLLVEGPPGLAKTRAVKALCDGVEGDFHRIQFTPDLLPADLTGTD IYRAQTGTFEFESGPIFHNLILADEINRAPAKVQSALLEAMAEGQVTVGKKSYKLPKFFLVMATQNPLENEGTYPLPEAQ LDRFLMHLNLDYPDAQTERLILKLSRNEALQGELPSVEPIAQADIFEARTEALELYLAEPLEQYIVDIIMATREGHKYSE ELGNWLDYGVSPRASQALERCARARAWLDGRDFVSPEDIQAVAPNVLRHRLLLSFRAQAEGVSADAVIDHILSQVAVP
Sequences:
>Translated_318_residues MPLSRFQALRKYLNTLILGQPVLTENLLIALVANGHLLVEGPPGLAKTRAVKALCDGVEGDFHRIQFTPDLLPADLTGTD IYRAQTGTFEFESGPIFHNLILADEINRAPAKVQSALLEAMAEGQVTVGKKSYKLPKFFLVMATQNPLENEGTYPLPEAQ LDRFLMHLNLDYPDAQTERLILKLSRNEALQGELPSVEPIAQADIFEARTEALELYLAEPLEQYIVDIIMATREGHKYSE ELGNWLDYGVSPRASQALERCARARAWLDGRDFVSPEDIQAVAPNVLRHRLLLSFRAQAEGVSADAVIDHILSQVAVP >Mature_317_residues PLSRFQALRKYLNTLILGQPVLTENLLIALVANGHLLVEGPPGLAKTRAVKALCDGVEGDFHRIQFTPDLLPADLTGTDI YRAQTGTFEFESGPIFHNLILADEINRAPAKVQSALLEAMAEGQVTVGKKSYKLPKFFLVMATQNPLENEGTYPLPEAQL DRFLMHLNLDYPDAQTERLILKLSRNEALQGELPSVEPIAQADIFEARTEALELYLAEPLEQYIVDIIMATREGHKYSEE LGNWLDYGVSPRASQALERCARARAWLDGRDFVSPEDIQAVAPNVLRHRLLLSFRAQAEGVSADAVIDHILSQVAVP
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 35291; Mature: 35160
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSRFQALRKYLNTLILGQPVLTENLLIALVANGHLLVEGPPGLAKTRAVKALCDGVEG CCHHHHHHHHHHHHHHHCCCCHHHHCEEEEEEECCEEEEECCCCHHHHHHHHHHHCCCCC DFHRIQFTPDLLPADLTGTDIYRAQTGTFEFESGPIFHNLILADEINRAPAKVQSALLEA CCEEEEECCCCCCCCCCCCCEEEECCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHH MAEGQVTVGKKSYKLPKFFLVMATQNPLENEGTYPLPEAQLDRFLMHLNLDYPDAQTERL HHCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHH ILKLSRNEALQGELPSVEPIAQADIFEARTEALELYLAEPLEQYIVDIIMATREGHKYSE HEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ELGNWLDYGVSPRASQALERCARARAWLDGRDFVSPEDIQAVAPNVLRHRLLLSFRAQAE HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GVSADAVIDHILSQVAVP CCCHHHHHHHHHHHHCCC >Mature Secondary Structure PLSRFQALRKYLNTLILGQPVLTENLLIALVANGHLLVEGPPGLAKTRAVKALCDGVEG CHHHHHHHHHHHHHHHCCCCHHHHCEEEEEEECCEEEEECCCCHHHHHHHHHHHCCCCC DFHRIQFTPDLLPADLTGTDIYRAQTGTFEFESGPIFHNLILADEINRAPAKVQSALLEA CCEEEEECCCCCCCCCCCCCEEEECCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHH MAEGQVTVGKKSYKLPKFFLVMATQNPLENEGTYPLPEAQLDRFLMHLNLDYPDAQTERL HHCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHH ILKLSRNEALQGELPSVEPIAQADIFEARTEALELYLAEPLEQYIVDIIMATREGHKYSE HEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ELGNWLDYGVSPRASQALERCARARAWLDGRDFVSPEDIQAVAPNVLRHRLLLSFRAQAE HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GVSADAVIDHILSQVAVP CCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]