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The map label for this gene is udk

Identifier: 119775182

GI number: 119775182

Start: 2483007

End: 2483645

Strand: Reverse

Name: udk

Synonym: Sama_2047

Alternate gene names: 119775182

Gene position: 2483645-2483007 (Counterclockwise)

Preceding gene: 119775183

Following gene: 119775181

Centisome position: 57.68

GC content: 49.77

Gene sequence:

>639_bases
ATGAATTCGCAGCAATGTGTCATTATTGGTATTGCAGGGGCCAGTGCATCGGGCAAGAGCCTTATCGCAAAAACCATATA
TGAAGAGTTGTGCCGTGATTTGGGCACTGATCAGATAGGTGTAATAGCAGAAGATGCCTATTATCGCGATCAGAGCCATC
TGTCCATGGAAGAGCGGGTAAAAACCAATTATGACCACCCCAAGGCCATGGACCATGAATTGTTGGCGCAGCATCTGCGA
AGCCTGAAAGAAGGTGACTCGGTGGAGATCCCGGTATACAGCTACACAGAGCATACCCGGATGAGCGATACCCGCACCAT
GACGCCCAAGAAGGTGATTATCCTCGAAGGCATCTTGCTGCTGACCGACCCGCATCTGCGTGATCTGATGGATGCCTCGG
TATTTATGGATACACCACTGGATATTTGTTTCCTGCGCCGTTTGACCCGTGACGTTGCTGAGCGTGGCCGTACCATGGAA
TCGGTCATCAGCCAGTACCAAAAGACGGTAAGGCCGATGTTTTTGCAGTTTATTGAACCGTCCAAGCAATATGCCGACAT
CATTGTGCCCCGTGGTGGTAAAAACCGTATTGCCACTGATATCCTCAAGGCACGTATTCAGCACCTGTTGGCAAAATAA

Upstream 100 bases:

>100_bases
CCGGGAAATAGCGCGGAAAGTGGGTGCCAGTCTTGCAAAGACGGGACCCCAGACCGGTGTATCCATTAGCATTTCGGACG
ATGAGTAAGGTTTTAAGTAT

Downstream 100 bases:

>100_bases
AAACATAAAACTCAGGGAGATAAAGGCAAGATGCGATTGACAGACTTTGAAATTGAGCAGGCCCTCGACGCCGGAACCAT
CCTTATTGAGCCTCGGCCAA

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNSQQCVIIGIAGASASGKSLIAKTIYEELCRDLGTDQIGVIAEDAYYRDQSHLSMEERVKTNYDHPKAMDHELLAQHLR
SLKEGDSVEIPVYSYTEHTRMSDTRTMTPKKVIILEGILLLTDPHLRDLMDASVFMDTPLDICFLRRLTRDVAERGRTME
SVISQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIATDILKARIQHLLAK

Sequences:

>Translated_212_residues
MNSQQCVIIGIAGASASGKSLIAKTIYEELCRDLGTDQIGVIAEDAYYRDQSHLSMEERVKTNYDHPKAMDHELLAQHLR
SLKEGDSVEIPVYSYTEHTRMSDTRTMTPKKVIILEGILLLTDPHLRDLMDASVFMDTPLDICFLRRLTRDVAERGRTME
SVISQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIATDILKARIQHLLAK
>Mature_212_residues
MNSQQCVIIGIAGASASGKSLIAKTIYEELCRDLGTDQIGVIAEDAYYRDQSHLSMEERVKTNYDHPKAMDHELLAQHLR
SLKEGDSVEIPVYSYTEHTRMSDTRTMTPKKVIILEGILLLTDPHLRDLMDASVFMDTPLDICFLRRLTRDVAERGRTME
SVISQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIATDILKARIQHLLAK

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family

Homologues:

Organism=Homo sapiens, GI57863312, Length=210, Percent_Identity=40, Blast_Score=170, Evalue=1e-42,
Organism=Homo sapiens, GI301129207, Length=210, Percent_Identity=40, Blast_Score=169, Evalue=1e-42,
Organism=Homo sapiens, GI18699734, Length=217, Percent_Identity=37.7880184331797, Blast_Score=167, Evalue=4e-42,
Organism=Homo sapiens, GI13899253, Length=215, Percent_Identity=34.8837209302326, Blast_Score=150, Evalue=7e-37,
Organism=Homo sapiens, GI209863022, Length=152, Percent_Identity=31.5789473684211, Blast_Score=95, Evalue=5e-20,
Organism=Escherichia coli, GI87082034, Length=209, Percent_Identity=73.2057416267943, Blast_Score=326, Evalue=6e-91,
Organism=Caenorhabditis elegans, GI17539892, Length=207, Percent_Identity=37.1980676328502, Blast_Score=157, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI17539894, Length=207, Percent_Identity=37.1980676328502, Blast_Score=157, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI71981181, Length=215, Percent_Identity=36.2790697674419, Blast_Score=136, Evalue=8e-33,
Organism=Saccharomyces cerevisiae, GI6324339, Length=178, Percent_Identity=34.2696629213483, Blast_Score=118, Evalue=7e-28,
Organism=Drosophila melanogaster, GI45550449, Length=204, Percent_Identity=41.1764705882353, Blast_Score=162, Evalue=2e-40,
Organism=Drosophila melanogaster, GI28573516, Length=204, Percent_Identity=41.1764705882353, Blast_Score=162, Evalue=2e-40,
Organism=Drosophila melanogaster, GI28573514, Length=204, Percent_Identity=41.1764705882353, Blast_Score=162, Evalue=2e-40,
Organism=Drosophila melanogaster, GI28573512, Length=204, Percent_Identity=41.1764705882353, Blast_Score=162, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24649624, Length=213, Percent_Identity=37.5586854460094, Blast_Score=155, Evalue=3e-38,
Organism=Drosophila melanogaster, GI221458995, Length=213, Percent_Identity=37.0892018779343, Blast_Score=154, Evalue=6e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URK_SHEAM (A1S796)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_927922.1
- ProteinModelPortal:   A1S796
- SMR:   A1S796
- STRING:   A1S796
- GeneID:   4604297
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_2047
- NMPDR:   fig|326297.7.peg.1922
- eggNOG:   COG0572
- HOGENOM:   HBG527126
- OMA:   DQIGVIA
- PhylomeDB:   A1S796
- ProtClustDB:   PRK05480
- GO:   GO:0005737
- HAMAP:   MF_00551
- InterPro:   IPR006083
- InterPro:   IPR000764
- PANTHER:   PTHR10285:SF6
- PRINTS:   PR00988
- TIGRFAMs:   TIGR00235

Pfam domain/function: PF00485 PRK

EC number: =2.7.1.48

Molecular weight: Translated: 24137; Mature: 24137

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSQQCVIIGIAGASASGKSLIAKTIYEELCRDLGTDQIGVIAEDAYYRDQSHLSMEERV
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCHHHCCHHHHH
KTNYDHPKAMDHELLAQHLRSLKEGDSVEIPVYSYTEHTRMSDTRTMTPKKVIILEGILL
HCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHH
LTDPHLRDLMDASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYQKTVRPMFLQFIEP
HCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
SKQYADIIVPRGGKNRIATDILKARIQHLLAK
CHHHHCEEECCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSQQCVIIGIAGASASGKSLIAKTIYEELCRDLGTDQIGVIAEDAYYRDQSHLSMEERV
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCHHHCCHHHHH
KTNYDHPKAMDHELLAQHLRSLKEGDSVEIPVYSYTEHTRMSDTRTMTPKKVIILEGILL
HCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHH
LTDPHLRDLMDASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYQKTVRPMFLQFIEP
HCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
SKQYADIIVPRGGKNRIATDILKARIQHLLAK
CHHHHCEEECCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA