| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is ilvI [H]
Identifier: 119775153
GI number: 119775153
Start: 2453387
End: 2455108
Strand: Direct
Name: ilvI [H]
Synonym: Sama_2018
Alternate gene names: 119775153
Gene position: 2453387-2455108 (Clockwise)
Preceding gene: 119775152
Following gene: 119775154
Centisome position: 56.97
GC content: 52.73
Gene sequence:
>1722_bases ATGGAAAAGCTTTCCGGCGCCAGCATGATTGTTCGATCCCTTATCGATGAAGGCGTAAAACACATTTTCGGTTATCCAGG TGGTTCTGTACTGGATATCTACGATGCCCTCCATGAAAGTTCAAATATAGAGCACATTCTGGTTCGCCATGAACAGGCCG CGGTACACATGGCCGACGGCTATGCCCGTGCCACAGGTGATGTGGGCGTAGTACTGGTAACCTCAGGCCCCGGCGCCACC AACGCCATCACAGGCATTGCCACGGCGTATATGGACTCGGTCCCGCTGGTTATCCTGTCCGGCCAGGTGCCTTCCAGTCT GATTGGCAACGATGCCTTTCAAGAATGCGACATGATTGGCATCTCAAGACCCATAGTGAAACACTCGTTTTTGGTAAAAG ACCCCACTGAAATACCCGAAACCATTAAAAAAGCCTTTTACATTGCCGCTACCGGCCGCCCAGGCCCTGTGGTTGTGGAC TTGCCCAAAGACACCCTGAACCCGGCGCTCAAGTTCGACTATGAGTACCCGTCAGAAGTGAAAATGCGCTCTTACAACCC CACGGTGACAGGTCATAAAGGCCAAATCCGCCGGGGTTTGCAGGCCCTCCTCAATGCCAAAAAACCGGTACTGTATGTGG GCGGCGGCGCTATTATCTCAAGCTGCGACAAGCAAATTCTGGCACTGTCTGAGCGTTTGAATATTCCAGTGGTCAACACC CTGATGGGCCTTGGCGCCTTTCCCGGCACCCACCCCAACAACATAGGTATGCTGGGCATGCATGGCACCTATGAAGCCAA CATGACCATGCATAACAGTGATCTGATTTTTGGTATTGGGGTACGTTTTGATGACCGAACCACCAATAACGTGCAGAAAT ACTGCCCCAACGCCACAGTGCTGCATATCGATATCGACCCTTCATCCATCTCCAAGACGGTACAGGCTCACATCCCCATC GTAGGCAGCGCCGACAAGGTACTGGATGAGATGCTGTCGCTGCTGGACGGCGACACCGAAATGCGAAACGATGAAGGCGC CATCGACTGCTGGTGGAATGACATTAATCAGTGGCGTTCACGCAAGTGCCTGGCCTATGAGACCAACAGTGAAAAAATCA AACCGCAGCAAGTCATAGAAACCCTCTATCGCCTCACCAAGGGCGATGCCTATGTGAGTTCCGATGTGGGACAGCATCAA ATGTTTGCGGCCCTGTACTACCCCTTTGACAAGCCAAGACGCTGGATAAACTCTGGTGGTCTGGGCACCATGGGCTTTGG TTTGCCCGCCGCCATGGGGGTGAAGATGGCGATGCCCGATGAAACCGTAGTCTGTGTCACCGGCGATGGCTCTATCCAGA TGAATATTCAAGAGCTTTCTACCGCACTGCAATACGATGTGCCGGTAAAAATCATCAACCTTAACAACCGCTTCCTGGGT ATGGTAAAGCAGTGGCAGGACATGATTTATTCAGGTCGCCACTCCCACTCCTACATGGACTCAGTACCGGACTTTGCCAA GATTGCCGAGGCCTATGGCCATGTTGGCATTACCATCAGCCGCCCGGAGGAGCTTGAGCCCAAGCTCGCCGAAGCCCTGT CGATGACTGACAGACTGGTGTTTGTAGACATTAATGTCGATGAAACTGAGCACGTTTACCCCATGCAAATTCGCGGGGGC GCGATGAATGACATGTGGCTGAGCAAAACGGAGAGAAGCTGA
Upstream 100 bases:
>100_bases TGAGCGAGTTTCTGGTACCCCAGGAGCTTGGTTTTAGAGCGATTACCGTCGCTGTAACAAGTACTGTTTACCGTAACGGT ATCTTTTTGAGGATGCACGA
Downstream 100 bases:
>100_bases TGCGCCGAATTATATCTGTACTTTTGGAAAACCAACCCGGTGCCCTTTCCCGTGTCGTTGGTCTGTTTTCCCAGCGTGGC TATAACATCGAATGTCTGAC
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS-III; ALS-III; Acetohydroxy-acid synthase III large subunit [H]
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MEKLSGASMIVRSLIDEGVKHIFGYPGGSVLDIYDALHESSNIEHILVRHEQAAVHMADGYARATGDVGVVLVTSGPGAT NAITGIATAYMDSVPLVILSGQVPSSLIGNDAFQECDMIGISRPIVKHSFLVKDPTEIPETIKKAFYIAATGRPGPVVVD LPKDTLNPALKFDYEYPSEVKMRSYNPTVTGHKGQIRRGLQALLNAKKPVLYVGGGAIISSCDKQILALSERLNIPVVNT LMGLGAFPGTHPNNIGMLGMHGTYEANMTMHNSDLIFGIGVRFDDRTTNNVQKYCPNATVLHIDIDPSSISKTVQAHIPI VGSADKVLDEMLSLLDGDTEMRNDEGAIDCWWNDINQWRSRKCLAYETNSEKIKPQQVIETLYRLTKGDAYVSSDVGQHQ MFAALYYPFDKPRRWINSGGLGTMGFGLPAAMGVKMAMPDETVVCVTGDGSIQMNIQELSTALQYDVPVKIINLNNRFLG MVKQWQDMIYSGRHSHSYMDSVPDFAKIAEAYGHVGITISRPEELEPKLAEALSMTDRLVFVDINVDETEHVYPMQIRGG AMNDMWLSKTERS
Sequences:
>Translated_573_residues MEKLSGASMIVRSLIDEGVKHIFGYPGGSVLDIYDALHESSNIEHILVRHEQAAVHMADGYARATGDVGVVLVTSGPGAT NAITGIATAYMDSVPLVILSGQVPSSLIGNDAFQECDMIGISRPIVKHSFLVKDPTEIPETIKKAFYIAATGRPGPVVVD LPKDTLNPALKFDYEYPSEVKMRSYNPTVTGHKGQIRRGLQALLNAKKPVLYVGGGAIISSCDKQILALSERLNIPVVNT LMGLGAFPGTHPNNIGMLGMHGTYEANMTMHNSDLIFGIGVRFDDRTTNNVQKYCPNATVLHIDIDPSSISKTVQAHIPI VGSADKVLDEMLSLLDGDTEMRNDEGAIDCWWNDINQWRSRKCLAYETNSEKIKPQQVIETLYRLTKGDAYVSSDVGQHQ MFAALYYPFDKPRRWINSGGLGTMGFGLPAAMGVKMAMPDETVVCVTGDGSIQMNIQELSTALQYDVPVKIINLNNRFLG MVKQWQDMIYSGRHSHSYMDSVPDFAKIAEAYGHVGITISRPEELEPKLAEALSMTDRLVFVDINVDETEHVYPMQIRGG AMNDMWLSKTERS >Mature_573_residues MEKLSGASMIVRSLIDEGVKHIFGYPGGSVLDIYDALHESSNIEHILVRHEQAAVHMADGYARATGDVGVVLVTSGPGAT NAITGIATAYMDSVPLVILSGQVPSSLIGNDAFQECDMIGISRPIVKHSFLVKDPTEIPETIKKAFYIAATGRPGPVVVD LPKDTLNPALKFDYEYPSEVKMRSYNPTVTGHKGQIRRGLQALLNAKKPVLYVGGGAIISSCDKQILALSERLNIPVVNT LMGLGAFPGTHPNNIGMLGMHGTYEANMTMHNSDLIFGIGVRFDDRTTNNVQKYCPNATVLHIDIDPSSISKTVQAHIPI VGSADKVLDEMLSLLDGDTEMRNDEGAIDCWWNDINQWRSRKCLAYETNSEKIKPQQVIETLYRLTKGDAYVSSDVGQHQ MFAALYYPFDKPRRWINSGGLGTMGFGLPAAMGVKMAMPDETVVCVTGDGSIQMNIQELSTALQYDVPVKIINLNNRFLG MVKQWQDMIYSGRHSHSYMDSVPDFAKIAEAYGHVGITISRPEELEPKLAEALSMTDRLVFVDINVDETEHVYPMQIRGG AMNDMWLSKTERS
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=591, Percent_Identity=26.2267343485618, Blast_Score=186, Evalue=6e-47, Organism=Homo sapiens, GI21361361, Length=559, Percent_Identity=24.3291592128801, Blast_Score=153, Evalue=4e-37, Organism=Escherichia coli, GI87081685, Length=576, Percent_Identity=75.6944444444444, Blast_Score=926, Evalue=0.0, Organism=Escherichia coli, GI1790104, Length=565, Percent_Identity=38.7610619469027, Blast_Score=422, Evalue=1e-119, Organism=Escherichia coli, GI1786717, Length=549, Percent_Identity=32.6047358834244, Blast_Score=316, Evalue=3e-87, Organism=Escherichia coli, GI1787096, Length=560, Percent_Identity=29.1071428571429, Blast_Score=209, Evalue=3e-55, Organism=Escherichia coli, GI1788716, Length=581, Percent_Identity=23.5800344234079, Blast_Score=160, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17531299, Length=588, Percent_Identity=25.3401360544218, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17531301, Length=588, Percent_Identity=25.3401360544218, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17542570, Length=518, Percent_Identity=25.6756756756757, Blast_Score=134, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6323755, Length=584, Percent_Identity=42.6369863013699, Blast_Score=447, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6320816, Length=474, Percent_Identity=24.2616033755274, Blast_Score=115, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6321524, Length=513, Percent_Identity=22.2222222222222, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6320123, Length=541, Percent_Identity=22.365988909427, Blast_Score=82, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6323163, Length=516, Percent_Identity=23.062015503876, Blast_Score=82, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6323073, Length=495, Percent_Identity=23.030303030303, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI19922626, Length=599, Percent_Identity=22.3706176961603, Blast_Score=166, Evalue=5e-41,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 62929; Mature: 62929
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLSGASMIVRSLIDEGVKHIFGYPGGSVLDIYDALHESSNIEHILVRHEQAAVHMADG CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEECCC YARATGDVGVVLVTSGPGATNAITGIATAYMDSVPLVILSGQVPSSLIGNDAFQECDMIG CEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHCCHHHHHHCCCC ISRPIVKHSFLVKDPTEIPETIKKAFYIAATGRPGPVVVDLPKDTLNPALKFDYEYPSEV CCCCHHHHEEEECCCHHHHHHHHHEEEEEECCCCCCEEEECCHHHCCCCEEECCCCCCCC KMRSYNPTVTGHKGQIRRGLQALLNAKKPVLYVGGGAIISSCDKQILALSERLNIPVVNT EEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHH LMGLGAFPGTHPNNIGMLGMHGTYEANMTMHNSDLIFGIGVRFDDRTTNNVQKYCPNATV HHHCCCCCCCCCCCEEEEECCCEEEECEEEECCCEEEEEEEEECCCCCCCHHHHCCCCEE LHIDIDPSSISKTVQAHIPIVGSADKVLDEMLSLLDGDTEMRNDEGAIDCWWNDINQWRS EEEECCHHHHHHHHHEECCEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHC RKCLAYETNSEKIKPQQVIETLYRLTKGDAYVSSDVGQHQMFAALYYPFDKPRRWINSGG CCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHEEEEEECCCHHHHHHHCCCC LGTMGFGLPAAMGVKMAMPDETVVCVTGDGSIQMNIQELSTALQYDVPVKIINLNNRFLG CCCCCCCCHHHHCEEEECCCCEEEEEECCCCEEEEHHHHHHHHCCCCCEEEEECCCHHHH MVKQWQDMIYSGRHSHSYMDSVPDFAKIAEAYGHVGITISRPEELEPKLAEALSMTDRLV HHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCEEEEECCCHHCCHHHHHHHHHCCEEE FVDINVDETEHVYPMQIRGGAMNDMWLSKTERS EEEECCCCCCCEEEEEECCCCCCCHHCCCCCCC >Mature Secondary Structure MEKLSGASMIVRSLIDEGVKHIFGYPGGSVLDIYDALHESSNIEHILVRHEQAAVHMADG CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEECCC YARATGDVGVVLVTSGPGATNAITGIATAYMDSVPLVILSGQVPSSLIGNDAFQECDMIG CEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHCCHHHHHHCCCC ISRPIVKHSFLVKDPTEIPETIKKAFYIAATGRPGPVVVDLPKDTLNPALKFDYEYPSEV CCCCHHHHEEEECCCHHHHHHHHHEEEEEECCCCCCEEEECCHHHCCCCEEECCCCCCCC KMRSYNPTVTGHKGQIRRGLQALLNAKKPVLYVGGGAIISSCDKQILALSERLNIPVVNT EEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHH LMGLGAFPGTHPNNIGMLGMHGTYEANMTMHNSDLIFGIGVRFDDRTTNNVQKYCPNATV HHHCCCCCCCCCCCEEEEECCCEEEECEEEECCCEEEEEEEEECCCCCCCHHHHCCCCEE LHIDIDPSSISKTVQAHIPIVGSADKVLDEMLSLLDGDTEMRNDEGAIDCWWNDINQWRS EEEECCHHHHHHHHHEECCEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHC RKCLAYETNSEKIKPQQVIETLYRLTKGDAYVSSDVGQHQMFAALYYPFDKPRRWINSGG CCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHEEEEEECCCHHHHHHHCCCC LGTMGFGLPAAMGVKMAMPDETVVCVTGDGSIQMNIQELSTALQYDVPVKIINLNNRFLG CCCCCCCCHHHHCEEEECCCCEEEEEECCCCEEEEHHHHHHHHCCCCCEEEEECCCHHHH MVKQWQDMIYSGRHSHSYMDSVPDFAKIAEAYGHVGITISRPEELEPKLAEALSMTDRLV HHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCEEEEECCCHHCCHHHHHHHHHCCEEE FVDINVDETEHVYPMQIRGGAMNDMWLSKTERS EEEECCCCCCCEEEEEECCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6308579; 1630901; 9278503; 3891724; 9298646 [H]