| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is minE
Identifier: 119775067
GI number: 119775067
Start: 2359143
End: 2359400
Strand: Direct
Name: minE
Synonym: Sama_1932
Alternate gene names: 119775067
Gene position: 2359143-2359400 (Clockwise)
Preceding gene: 119775066
Following gene: 119775076
Centisome position: 54.79
GC content: 48.06
Gene sequence:
>258_bases ATGTCTTTACTCGATTACTTCAGAAGCAACAAAAAAGCCAGCTCAGCGTCCCTTGCCAAGGAACGTTTGCAGATTATCGT GGCACATCAACGCACTGAACGCGGCGCACCGGACTACTTTCCGCAGATGAAACAGGAAATTATCGAAGTGATCCGCAAGT ACGTTTACATTTCGGAAGAACAGGTCTCTGTGCAGCTGGAGCAAAATGACGACAACCTGTCAGTGCTTGAGCTTAACGTT ACCCTGCCGGAACGTTAA
Upstream 100 bases:
>100_bases ACAGTGATACCGTTGCCCGTTTGTTGGGTGAAGAACTCCCACTTCGCTTCGTCACCGAAGAGAAGAAGGGCCTGTTGAAA AGGATTTTTGGTAGCTGATT
Downstream 100 bases:
>100_bases TCGACTCAGTGGTTTATGTTGCTCATAGCTGATTTCAAGGCAGCCCTCAACAGGCCGTGAAGTCGCTGTGCTTAGGCTAA CATTGACGGGTTACAAAAAA
Product: cell division topological specificity factor MinE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSLLDYFRSNKKASSASLAKERLQIIVAHQRTERGAPDYFPQMKQEIIEVIRKYVYISEEQVSVQLEQNDDNLSVLELNV TLPER
Sequences:
>Translated_85_residues MSLLDYFRSNKKASSASLAKERLQIIVAHQRTERGAPDYFPQMKQEIIEVIRKYVYISEEQVSVQLEQNDDNLSVLELNV TLPER >Mature_84_residues SLLDYFRSNKKASSASLAKERLQIIVAHQRTERGAPDYFPQMKQEIIEVIRKYVYISEEQVSVQLEQNDDNLSVLELNVT LPER
Specific function: Prevents the cell division inhibition by proteins minC and minD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the l
COG id: COG0851
COG function: function code D; Septum formation topological specificity factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the minE family
Homologues:
Organism=Escherichia coli, GI1787422, Length=84, Percent_Identity=59.5238095238095, Blast_Score=100, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MINE_SHEAM (A1S6Y1)
Other databases:
- EMBL: CP000507 - RefSeq: YP_927807.1 - ProteinModelPortal: A1S6Y1 - SMR: A1S6Y1 - STRING: A1S6Y1 - GeneID: 4604182 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_1932 - NMPDR: fig|326297.7.peg.1815 - eggNOG: COG0851 - HOGENOM: HBG449956 - OMA: IIIARER - PhylomeDB: A1S6Y1 - HAMAP: MF_00262 - InterPro: IPR005527 - TIGRFAMs: TIGR01215
Pfam domain/function: PF03776 MinE
EC number: NA
Molecular weight: Translated: 9912; Mature: 9781
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLDYFRSNKKASSASLAKERLQIIVAHQRTERGAPDYFPQMKQEIIEVIRKYVYISEE CCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC QVSVQLEQNDDNLSVLELNVTLPER CEEEEEECCCCCEEEEEEEEECCCC >Mature Secondary Structure SLLDYFRSNKKASSASLAKERLQIIVAHQRTERGAPDYFPQMKQEIIEVIRKYVYISEE CHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC QVSVQLEQNDDNLSVLELNVTLPER CEEEEEECCCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA