Click here to switch to the map view.

The map label for this gene is 119775050

Identifier: 119775050

GI number: 119775050

Start: 2342098

End: 2342490

Strand: Direct

Name: 119775050

Synonym: Sama_1915

Alternate gene names: NA

Gene position: 2342098-2342490 (Clockwise)

Preceding gene: 119775049

Following gene: 119775053

Centisome position: 54.39

GC content: 56.74

Gene sequence:

>393_bases
GTGCTGTCAAACACCGCGTTACTGCTGACCATTAATCGTGTGGGTTACCTCGCGCTGCTGCTGGTGATGGCCTACTGGTT
TGTGCTCGGACCCAACAGTCAGGAATACTCCCTGGTTTTTAACCTGTTGTGGTTGGTGCCCCTGCTGCTGCCGCTCCCCG
GACTGATGAAAGGCAATCCCTACACCCACGCCTGGGCAAGCTTTGTGCTCTGTCTGTATCTGCTGCACGCACTGACCCTG
GTATACATCGCGGGTGATTGGTTGTGGTTTGCCTGTCTGGAGCTGGCGCTATTGGTGCTCCTGTCAGTCACCTTCCCGTT
TTACGCCCGCCATCGCGGCCGCGAACTCGGTCTTGGGCTCAAGAAAAAGTCCAGGGACAAAGGCGACGAGTAA

Upstream 100 bases:

>100_bases
CCAACCCCAAGCTTATCGAGCGCCCTGTGGTGCTGGCTAACGGTAAGGCCGCCATTGGCAGACCTCCCGCCAACGTGCTT
GAAATTCTTTGAGGTGTCCT

Downstream 100 bases:

>100_bases
GATGCTTTCAGGCACAAAAAAACGCGGCAATATGCCGCGTTTTTTTGTGAGTTGAGGTCATTGAAATTCTTTCATTGAAC
GCTGCTTTATAGCGAATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MLSNTALLLTINRVGYLALLLVMAYWFVLGPNSQEYSLVFNLLWLVPLLLPLPGLMKGNPYTHAWASFVLCLYLLHALTL
VYIAGDWLWFACLELALLVLLSVTFPFYARHRGRELGLGLKKKSRDKGDE

Sequences:

>Translated_130_residues
MLSNTALLLTINRVGYLALLLVMAYWFVLGPNSQEYSLVFNLLWLVPLLLPLPGLMKGNPYTHAWASFVLCLYLLHALTL
VYIAGDWLWFACLELALLVLLSVTFPFYARHRGRELGLGLKKKSRDKGDE
>Mature_130_residues
MLSNTALLLTINRVGYLALLLVMAYWFVLGPNSQEYSLVFNLLWLVPLLLPLPGLMKGNPYTHAWASFVLCLYLLHALTL
VYIAGDWLWFACLELALLVLLSVTFPFYARHRGRELGLGLKKKSRDKGDE

Specific function: Unknown

COG id: COG3308

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14769; Mature: 14769

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNTALLLTINRVGYLALLLVMAYWFVLGPNSQEYSLVFNLLWLVPLLLPLPGLMKGNP
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
YTHAWASFVLCLYLLHALTLVYIAGDWLWFACLELALLVLLSVTFPFYARHRGRELGLGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
KKKSRDKGDE
CHHCCCCCCC
>Mature Secondary Structure
MLSNTALLLTINRVGYLALLLVMAYWFVLGPNSQEYSLVFNLLWLVPLLLPLPGLMKGNP
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
YTHAWASFVLCLYLLHALTLVYIAGDWLWFACLELALLVLLSVTFPFYARHRGRELGLGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
KKKSRDKGDE
CHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA