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The map label for this gene is yfgC [C]

Identifier: 119775048

GI number: 119775048

Start: 2340177

End: 2341646

Strand: Direct

Name: yfgC [C]

Synonym: Sama_1913

Alternate gene names: 119775048

Gene position: 2340177-2341646 (Clockwise)

Preceding gene: 119775045

Following gene: 119775049

Centisome position: 54.35

GC content: 53.33

Gene sequence:

>1470_bases
TTGCGTAATTTGACACTTTCCAGACTGACAAAAACGCTCGCTGCGGCGGGTTTATCCATCATGCTCACCTTACCGGCAGC
CAAGAGTTTTGCGAGCAACGATTTACCTGATCTGGGTACGGCAGCGGTTAACACCTTCAGTCTGGAAAAAGAAATGATCT
ACGGGGATGCCTACATGCGAGTCATTCGCTCGTCGGCGCCCCTGCTCAACGACCCTGTACTGAGCCAATACCTTACAGAA
CTTGGCAACAAACTTGTCGCCAATGCCACCGGCGTGAAAACGCCTTTTTACTTTTTCTTGCTGCGTAACGACGAAATCAA
CGCCTTCGCGTTTTTCGGGGGCCATGTGGGCGTGCATACGGGGCTCTTTTTAAATGCTGACACCGAGAGTGAACTGGCAT
CGGTACTGGCCCACGAAATCACCCACGTCACCCAGCGCCATTTGGCGCGATCGTTGGAAGCACAGCAAAAATCGGGGCCT
GCCACCATTGCCGGTCTCCTTGGCGCGATATTACTTACCATCGCCGCTCCCCAGGCAGGCATGGCCGCTCTCGCCACCAC
CCAGGCGCTCGCTACCCAGTCAAAAATCAACTACACCCGTCAGCATGAAAAAGAAGCCGATCGAATAGGGATGCAAATTC
TGGTGGAGGCTGGGTTTGACCCCGAAGCGGCAGCAGACTTTTTCGGTAAGATTGCCAGTCGTTACCGCTTCACCACCAAG
CCGCCACAAATGCTGTTGACTCACCCCTTGCCTGAGTCACGCATAAGCGAAGCCCGCACGCGGGCGACCCAATACCCTCA
CAAGTATGTGCCGGACAGTTTGAACTACCATTTGGCAAGAGCCAGGGTACAGGTCAGGTTCTCCAGTTACAGTGAAGAAG
CGGCACTGAATCTGTTTGAAAAACAACTCTCACGCCACAGCTATACCTTTGAAAGTGCAGCCCTCTATGGCAAGGCACTG
GCACTGTTTCGCCTGAAGCGCTTTGAAGAATCGGAAGCCATCATCGACAAATTGCTTGCTCGGGATGACAACAATCTGTT
CTATCTCGATACCAAAACCGATTTGCTCGCTGAGCGCAAAGACTTCCAGTCAGCCATCAAGCTGTTGGAGGCCAAGCGTA
AACTCAAGCCTACCTCTCAGGTAATCAATGCCAACCTCGCTAACGTGTATATTGAAGCGGACGAGGGTGCGAAGGCCATT
CCCCTCCTGGAAGACATGGTGTTCCTCGACAGGCAAAATCCACTGCCTTACCAGCTGATGACCCAGGCCTACCGAAAAGC
TGGCAATAAGGCACTGGAGCACTTTTCCACCGCCGAAACCCTGGCACTTGCAGCAGATTACAAGGGCGCAGTCGATCAGC
TCAACTTCGCCTATCGCTACACCAAGGACGATGCCTTGCAGCTGGCGCGTATTGAAGCCCGCATTCGCCAGTTTAAAGAT
GCCGAAAGAGCCCTGGACGAGCTAAAGTAG

Upstream 100 bases:

>100_bases
GAACTTGCCTTCGCTAAACCGGGGCTATTATCCTTGCTTGCACGCGAAACCACAAGCGACTTGCCCAAGGCCGGACACCA
ACACAGGGACCTTTATCCTC

Downstream 100 bases:

>100_bases
CCGGATTGTCAAACAGGCCCCGCCGCTGACGGGGCCTGTTTTTTTTGATATCATCTGCGCCAATTTTTATGGCATAAAAA
TCGGAATCCCTAATGAAAAA

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MRNLTLSRLTKTLAAAGLSIMLTLPAAKSFASNDLPDLGTAAVNTFSLEKEMIYGDAYMRVIRSSAPLLNDPVLSQYLTE
LGNKLVANATGVKTPFYFFLLRNDEINAFAFFGGHVGVHTGLFLNADTESELASVLAHEITHVTQRHLARSLEAQQKSGP
ATIAGLLGAILLTIAAPQAGMAALATTQALATQSKINYTRQHEKEADRIGMQILVEAGFDPEAAADFFGKIASRYRFTTK
PPQMLLTHPLPESRISEARTRATQYPHKYVPDSLNYHLARARVQVRFSSYSEEAALNLFEKQLSRHSYTFESAALYGKAL
ALFRLKRFEESEAIIDKLLARDDNNLFYLDTKTDLLAERKDFQSAIKLLEAKRKLKPTSQVINANLANVYIEADEGAKAI
PLLEDMVFLDRQNPLPYQLMTQAYRKAGNKALEHFSTAETLALAADYKGAVDQLNFAYRYTKDDALQLARIEARIRQFKD
AERALDELK

Sequences:

>Translated_489_residues
MRNLTLSRLTKTLAAAGLSIMLTLPAAKSFASNDLPDLGTAAVNTFSLEKEMIYGDAYMRVIRSSAPLLNDPVLSQYLTE
LGNKLVANATGVKTPFYFFLLRNDEINAFAFFGGHVGVHTGLFLNADTESELASVLAHEITHVTQRHLARSLEAQQKSGP
ATIAGLLGAILLTIAAPQAGMAALATTQALATQSKINYTRQHEKEADRIGMQILVEAGFDPEAAADFFGKIASRYRFTTK
PPQMLLTHPLPESRISEARTRATQYPHKYVPDSLNYHLARARVQVRFSSYSEEAALNLFEKQLSRHSYTFESAALYGKAL
ALFRLKRFEESEAIIDKLLARDDNNLFYLDTKTDLLAERKDFQSAIKLLEAKRKLKPTSQVINANLANVYIEADEGAKAI
PLLEDMVFLDRQNPLPYQLMTQAYRKAGNKALEHFSTAETLALAADYKGAVDQLNFAYRYTKDDALQLARIEARIRQFKD
AERALDELK
>Mature_489_residues
MRNLTLSRLTKTLAAAGLSIMLTLPAAKSFASNDLPDLGTAAVNTFSLEKEMIYGDAYMRVIRSSAPLLNDPVLSQYLTE
LGNKLVANATGVKTPFYFFLLRNDEINAFAFFGGHVGVHTGLFLNADTESELASVLAHEITHVTQRHLARSLEAQQKSGP
ATIAGLLGAILLTIAAPQAGMAALATTQALATQSKINYTRQHEKEADRIGMQILVEAGFDPEAAADFFGKIASRYRFTTK
PPQMLLTHPLPESRISEARTRATQYPHKYVPDSLNYHLARARVQVRFSSYSEEAALNLFEKQLSRHSYTFESAALYGKAL
ALFRLKRFEESEAIIDKLLARDDNNLFYLDTKTDLLAERKDFQSAIKLLEAKRKLKPTSQVINANLANVYIEADEGAKAI
PLLEDMVFLDRQNPLPYQLMTQAYRKAGNKALEHFSTAETLALAADYKGAVDQLNFAYRYTKDDALQLARIEARIRQFKD
AERALDELK

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=474, Percent_Identity=43.0379746835443, Blast_Score=369, Evalue=1e-103,
Organism=Escherichia coli, GI87082185, Length=254, Percent_Identity=24.8031496062992, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 54449; Mature: 54449

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLTLSRLTKTLAAAGLSIMLTLPAAKSFASNDLPDLGTAAVNTFSLEKEMIYGDAYMR
CCCCCHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VIRSSAPLLNDPVLSQYLTELGNKLVANATGVKTPFYFFLLRNDEINAFAFFGGHVGVHT
HHHHCCCCCCCHHHHHHHHHHCHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCHHHC
GLFLNADTESELASVLAHEITHVTQRHLARSLEAQQKSGPATIAGLLGAILLTIAAPQAG
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
MAALATTQALATQSKINYTRQHEKEADRIGMQILVEAGFDPEAAADFFGKIASRYRFTTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEECCCCHHHHHHHHHHHHHHCCCCCC
PPQMLLTHPLPESRISEARTRATQYPHKYVPDSLNYHLARARVQVRFSSYSEEAALNLFE
CCHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEEEEEECCCCHHHHHHHHH
KQLSRHSYTFESAALYGKALALFRLKRFEESEAIIDKLLARDDNNLFYLDTKTDLLAERK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH
DFQSAIKLLEAKRKLKPTSQVINANLANVYIEADEGAKAIPLLEDMVFLDRQNPLPYQLM
HHHHHHHHHHHHHHCCCHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHH
TQAYRKAGNKALEHFSTAETLALAADYKGAVDQLNFAYRYTKDDALQLARIEARIRQFKD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCHHHHHHHHHHHHHHHHHH
AERALDELK
HHHHHHHCC
>Mature Secondary Structure
MRNLTLSRLTKTLAAAGLSIMLTLPAAKSFASNDLPDLGTAAVNTFSLEKEMIYGDAYMR
CCCCCHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VIRSSAPLLNDPVLSQYLTELGNKLVANATGVKTPFYFFLLRNDEINAFAFFGGHVGVHT
HHHHCCCCCCCHHHHHHHHHHCHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCHHHC
GLFLNADTESELASVLAHEITHVTQRHLARSLEAQQKSGPATIAGLLGAILLTIAAPQAG
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
MAALATTQALATQSKINYTRQHEKEADRIGMQILVEAGFDPEAAADFFGKIASRYRFTTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEECCCCHHHHHHHHHHHHHHCCCCCC
PPQMLLTHPLPESRISEARTRATQYPHKYVPDSLNYHLARARVQVRFSSYSEEAALNLFE
CCHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEEEEEECCCCHHHHHHHHH
KQLSRHSYTFESAALYGKALALFRLKRFEESEAIIDKLLARDDNNLFYLDTKTDLLAERK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH
DFQSAIKLLEAKRKLKPTSQVINANLANVYIEADEGAKAIPLLEDMVFLDRQNPLPYQLM
HHHHHHHHHHHHHHCCCHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHH
TQAYRKAGNKALEHFSTAETLALAADYKGAVDQLNFAYRYTKDDALQLARIEARIRQFKD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCHHHHHHHHHHHHHHHHHH
AERALDELK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]