Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yeaC [H]

Identifier: 119775032

GI number: 119775032

Start: 2314457

End: 2315386

Strand: Direct

Name: yeaC [H]

Synonym: Sama_1897

Alternate gene names: 119775032

Gene position: 2314457-2315386 (Clockwise)

Preceding gene: 119775031

Following gene: 119775033

Centisome position: 53.75

GC content: 55.27

Gene sequence:

>930_bases
ATGCAGGAAAACACCGCAGCCCAAAATGCCACCGAACTGGAAAATCTGATTGCCCAATTACAGCGGGTTCTGCTGGGTAA
ACCCAAGCAAATTCGCCTGGCACTTTGCTGTGTACTGGCCCGCGGACACCTGCTGATTGAAGATCTGCCCGGGATGGGAA
AAACCAGTCTGAGTCAGGCCATGGCAAAGAGCCTTGGTCTCACTTATCAAAGGGTTCAGTTTACCAGTGACATGTTGCCT
GCCGATATTCTCGGTGTATCCATCTACGATAAAGCAATGAACCAGTTTGTATTTCATCCCGGCCCCCTGTTTCGCCAGAT
GGTGCTTGCCGATGAGATTAACCGCGCCAGCCCCAAGACCCAAAGCGCGCTGCTGGAGGCAATGGCCGAAGGCCAAATCA
CAGTCGATGGTAATACCCATCCACTGCCAAAACCGTTTTTCGTGATTGCAACGCAAAACCCCACCGACCAATCGGGCACC
TTCCCCCTGCCCGAGTCTCAGCTTGACCGTTTCATGATGCGAATATCCCTGGGGTATCCGAGTAAAGAAGCCGAGCTTGC
CATGCTAAAAGGGCAAGGGGAAAACCCGGCTTCAGCGTTGCCTCAATGCATCAGTCCCCTGGGTCTGATGCAACTTCAGG
CAGAGGTAGACAAAATCACCAGCTCAGATGCGGTGCTGCACTACTTATTGGCATTGGTAGAGGAAACCCGCACTCAAGGT
GAAGGCTACGGCCTGTCCCCCAGAGCCACCAAGGCCCTGCTCGCCTGTGGCAAGGCCTGGGCGTTTCTCAGTGGCCGCCA
ATTCATGGTGCCGGAAGATCTGCAGGCTGTGTTTGTGGCGGTTGCACAGCACAGGCTCAGAGCCAGCAGCCAGCATCAGG
GCCAAAGTCTGGCCGAACGTGTCCTTGGCGCCGTGAATCCCATCCGCTGA

Upstream 100 bases:

>100_bases
TTTCGGCGTCGATTCTGCGAGCATTTGATGACTGTAACGCTGGATCACTCATCGAAAATTGCGCATAGTAAGGTTTTGAG
TTCCCCCTGAGGATGAAAGG

Downstream 100 bases:

>100_bases
TGGCCAGGGGCATATCTGTCAGGCTTGAGCCATTCCTTGCCAGGCGTTTACCGCCCGCACGGGAGCAAACCCTCAGCCAC
AAGGGGATCTTTATTTTGCC

Product: MoxR protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MQENTAAQNATELENLIAQLQRVLLGKPKQIRLALCCVLARGHLLIEDLPGMGKTSLSQAMAKSLGLTYQRVQFTSDMLP
ADILGVSIYDKAMNQFVFHPGPLFRQMVLADEINRASPKTQSALLEAMAEGQITVDGNTHPLPKPFFVIATQNPTDQSGT
FPLPESQLDRFMMRISLGYPSKEAELAMLKGQGENPASALPQCISPLGLMQLQAEVDKITSSDAVLHYLLALVEETRTQG
EGYGLSPRATKALLACGKAWAFLSGRQFMVPEDLQAVFVAVAQHRLRASSQHQGQSLAERVLGAVNPIR

Sequences:

>Translated_309_residues
MQENTAAQNATELENLIAQLQRVLLGKPKQIRLALCCVLARGHLLIEDLPGMGKTSLSQAMAKSLGLTYQRVQFTSDMLP
ADILGVSIYDKAMNQFVFHPGPLFRQMVLADEINRASPKTQSALLEAMAEGQITVDGNTHPLPKPFFVIATQNPTDQSGT
FPLPESQLDRFMMRISLGYPSKEAELAMLKGQGENPASALPQCISPLGLMQLQAEVDKITSSDAVLHYLLALVEETRTQG
EGYGLSPRATKALLACGKAWAFLSGRQFMVPEDLQAVFVAVAQHRLRASSQHQGQSLAERVLGAVNPIR
>Mature_309_residues
MQENTAAQNATELENLIAQLQRVLLGKPKQIRLALCCVLARGHLLIEDLPGMGKTSLSQAMAKSLGLTYQRVQFTSDMLP
ADILGVSIYDKAMNQFVFHPGPLFRQMVLADEINRASPKTQSALLEAMAEGQITVDGNTHPLPKPFFVIATQNPTDQSGT
FPLPESQLDRFMMRISLGYPSKEAELAMLKGQGENPASALPQCISPLGLMQLQAEVDKITSSDAVLHYLLALVEETRTQG
EGYGLSPRATKALLACGKAWAFLSGRQFMVPEDLQAVFVAVAQHRLRASSQHQGQSLAERVLGAVNPIR

Specific function: Unknown

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the moxR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011703
- InterPro:   IPR016366 [H]

Pfam domain/function: PF07726 AAA_3 [H]

EC number: NA

Molecular weight: Translated: 33663; Mature: 33663

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQENTAAQNATELENLIAQLQRVLLGKPKQIRLALCCVLARGHLLIEDLPGMGKTSLSQA
CCCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
MAKSLGLTYQRVQFTSDMLPADILGVSIYDKAMNQFVFHPGPLFRQMVLADEINRASPKT
HHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHH
QSALLEAMAEGQITVDGNTHPLPKPFFVIATQNPTDQSGTFPLPESQLDRFMMRISLGYP
HHHHHHHHHCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC
SKEAELAMLKGQGENPASALPQCISPLGLMQLQAEVDKITSSDAVLHYLLALVEETRTQG
CCCCCEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
EGYGLSPRATKALLACGKAWAFLSGRQFMVPEDLQAVFVAVAQHRLRASSQHQGQSLAER
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGAVNPIR
HHHHCCCCC
>Mature Secondary Structure
MQENTAAQNATELENLIAQLQRVLLGKPKQIRLALCCVLARGHLLIEDLPGMGKTSLSQA
CCCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
MAKSLGLTYQRVQFTSDMLPADILGVSIYDKAMNQFVFHPGPLFRQMVLADEINRASPKT
HHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHH
QSALLEAMAEGQITVDGNTHPLPKPFFVIATQNPTDQSGTFPLPESQLDRFMMRISLGYP
HHHHHHHHHCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC
SKEAELAMLKGQGENPASALPQCISPLGLMQLQAEVDKITSSDAVLHYLLALVEETRTQG
CCCCCEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
EGYGLSPRATKALLACGKAWAFLSGRQFMVPEDLQAVFVAVAQHRLRASSQHQGQSLAER
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGAVNPIR
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377 [H]