Click here to switch to the map view.

The map label for this gene is ssuA [H]

Identifier: 119775025

GI number: 119775025

Start: 2305835

End: 2306821

Strand: Direct

Name: ssuA [H]

Synonym: Sama_1890

Alternate gene names: 119775025

Gene position: 2305835-2306821 (Clockwise)

Preceding gene: 119775024

Following gene: 119775026

Centisome position: 53.55

GC content: 48.53

Gene sequence:

>987_bases
ATGAAGAGATTGGTTGCAGCCTTGGCAATGTCAATCGCTGTAGTTTGGTATTTGATGGTTTCGGTAGACCAGGGTTCGGC
CAATGCCACCAACTCCCTGACTATCGCCGTATCGGCTACCCCGCTGTCGAGCCCCATTATCGTCGCCGAAAAGAAGGGGC
TCTTTCAAAAACACGGCCTGAAAGTGCAGTTAAAGCTCCTGCAGGGCGGTCACCGATGCTTTGATGCCTTGATAAAAAAC
GAAGCGGATTTAGCCACAAGCTCTGAATCCGTGGTGATGTATAACGCCTTTAAACGTAATGACTTTAGTGTAATTACGAG
CTTTGTCACCTCGGATAACGACGTTAAAGTGATTGTGCGTAAAGACAGCGGCATAACGTCGTTGACGGATATTTCAGGCC
ACAGTGTGGGTATGGTCAAAGGCACTTCCAGCGAGTATTTTTTCAATTCCGCGTTACTGCTTCATGGTGTGGAAAACGCT
CTGATTTCCGCCCGTTTTATGGCTCCTGAAGAGCTGGGAAAGGCACTGCTTGATAAACAATTGGATGCAGTCTCTCTGTG
GGAGCCTTATGCCAGCGAGCTGATGCAGTCTCTTAAAAGCGATGGCAGCCAACTCAGCACGAAAGGCCTTTACCGTTTGT
CTTTCAATTTATTATCTATGCGGGGCGATATTCAGAGTAAGCAGGACACCCACGTGCGTGTACTCAGGGCGCTGGATGAA
GCCGTTGCCAGTATCATCACCAGTCCGGCGGAAGCCAAACAGCTTGTCAGTGACTATCTCAACGTGCCTTTGCCTGAGAT
AGAAGGTTTTTGGGCGGACTACCACTTTCATCTTGGGTTAGATAAAACACTCCAATTAGAGCTGCTGTCCCAAGCCCACT
GGGCAATAGATTCTGGCTATGTGGACCAGTCTCAAGCACCTGATTTTCGTGATTTTATCGATAAAACTGCACTCAGCCAG
ATTAGGGATACGTTCCGCTCACATTGA

Upstream 100 bases:

>100_bases
CCTTTTCTTAAGAGGTTTCTACTGAAAACCCGTCAGGCACCTGTGCGATCAGGATTAAAGCCAACTACACTCAAATCAGC
GTGGGGAGGATGTCGACAAC

Downstream 100 bases:

>100_bases
GGTGAACCATGACACTTTCCAAACGACTCAAACTCAGCGTAGTGATTTCAGGACTTTTGCTGTTTCTGCTGATGGGTATA
TTGCTTTACTTGGTCGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKRLVAALAMSIAVVWYLMVSVDQGSANATNSLTIAVSATPLSSPIIVAEKKGLFQKHGLKVQLKLLQGGHRCFDALIKN
EADLATSSESVVMYNAFKRNDFSVITSFVTSDNDVKVIVRKDSGITSLTDISGHSVGMVKGTSSEYFFNSALLLHGVENA
LISARFMAPEELGKALLDKQLDAVSLWEPYASELMQSLKSDGSQLSTKGLYRLSFNLLSMRGDIQSKQDTHVRVLRALDE
AVASIITSPAEAKQLVSDYLNVPLPEIEGFWADYHFHLGLDKTLQLELLSQAHWAIDSGYVDQSQAPDFRDFIDKTALSQ
IRDTFRSH

Sequences:

>Translated_328_residues
MKRLVAALAMSIAVVWYLMVSVDQGSANATNSLTIAVSATPLSSPIIVAEKKGLFQKHGLKVQLKLLQGGHRCFDALIKN
EADLATSSESVVMYNAFKRNDFSVITSFVTSDNDVKVIVRKDSGITSLTDISGHSVGMVKGTSSEYFFNSALLLHGVENA
LISARFMAPEELGKALLDKQLDAVSLWEPYASELMQSLKSDGSQLSTKGLYRLSFNLLSMRGDIQSKQDTHVRVLRALDE
AVASIITSPAEAKQLVSDYLNVPLPEIEGFWADYHFHLGLDKTLQLELLSQAHWAIDSGYVDQSQAPDFRDFIDKTALSQ
IRDTFRSH
>Mature_328_residues
MKRLVAALAMSIAVVWYLMVSVDQGSANATNSLTIAVSATPLSSPIIVAEKKGLFQKHGLKVQLKLLQGGHRCFDALIKN
EADLATSSESVVMYNAFKRNDFSVITSFVTSDNDVKVIVRKDSGITSLTDISGHSVGMVKGTSSEYFFNSALLLHGVENA
LISARFMAPEELGKALLDKQLDAVSLWEPYASELMQSLKSDGSQLSTKGLYRLSFNLLSMRGDIQSKQDTHVRVLRALDE
AVASIITSPAEAKQLVSDYLNVPLPEIEGFWADYHFHLGLDKTLQLELLSQAHWAIDSGYVDQSQAPDFRDFIDKTALSQ
IRDTFRSH

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168
- InterPro:   IPR001638 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 36090; Mature: 36090

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLVAALAMSIAVVWYLMVSVDQGSANATNSLTIAVSATPLSSPIIVAEKKGLFQKHGL
CHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEEECCCCCCEEEECCCCCHHHCCC
KVQLKLLQGGHRCFDALIKNEADLATSSESVVMYNAFKRNDFSVITSFVTSDNDVKVIVR
EEEEEEHHCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEE
KDSGITSLTDISGHSVGMVKGTSSEYFFNSALLLHGVENALISARFMAPEELGKALLDKQ
CCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
LDAVSLWEPYASELMQSLKSDGSQLSTKGLYRLSFNLLSMRGDIQSKQDTHVRVLRALDE
CCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEHHHHHHHCCCCCCCCHHHHHHHHHHHH
AVASIITSPAEAKQLVSDYLNVPLPEIEGFWADYHFHLGLDKTLQLELLSQAHWAIDSGY
HHHHHHCCCHHHHHHHHHHHCCCCCHHCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCC
VDQSQAPDFRDFIDKTALSQIRDTFRSH
CCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRLVAALAMSIAVVWYLMVSVDQGSANATNSLTIAVSATPLSSPIIVAEKKGLFQKHGL
CHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEEECCCCCCEEEECCCCCHHHCCC
KVQLKLLQGGHRCFDALIKNEADLATSSESVVMYNAFKRNDFSVITSFVTSDNDVKVIVR
EEEEEEHHCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEE
KDSGITSLTDISGHSVGMVKGTSSEYFFNSALLLHGVENALISARFMAPEELGKALLDKQ
CCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
LDAVSLWEPYASELMQSLKSDGSQLSTKGLYRLSFNLLSMRGDIQSKQDTHVRVLRALDE
CCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEHHHHHHHCCCCCCCCHHHHHHHHHHHH
AVASIITSPAEAKQLVSDYLNVPLPEIEGFWADYHFHLGLDKTLQLELLSQAHWAIDSGY
HHHHHHCCCHHHHHHHHHHHCCCCCHHCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCC
VDQSQAPDFRDFIDKTALSQIRDTFRSH
CCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]