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The map label for this gene is ald [H]

Identifier: 119774905

GI number: 119774905

Start: 2163974

End: 2165086

Strand: Reverse

Name: ald [H]

Synonym: Sama_1770

Alternate gene names: 119774905

Gene position: 2165086-2163974 (Counterclockwise)

Preceding gene: 119774913

Following gene: 119774904

Centisome position: 50.28

GC content: 53.64

Gene sequence:

>1113_bases
ATGATAATTGGTGTACCAAAGGAAATCAAAAACCATGAATATCGCGTTGGTATGGTTCCCTCCAGCGTGCGTGAACTGAC
CCTGCGTGGCCATGCGGTGTTCGTAGAGGCCACTGCCGGTAGCGGTATTGGCTTTACAGATCAAGACTATATCGACGCCG
GTGCCACTATTCTGGGCACAGCAGAAGAAGTCTTTGCCAAAGCCGATATGATTGTGAAAGTGAAAGAGCCTCAGGCCGTA
GAGCGCGCTATGCTGCGTCACGACCAAATCCTCTTCACCTACCTGCACCTTGCTCCGGATCTGCCTCAAACTGAAGAGCT
GGTAAGCTCAGGCGCTGTTTGTATTGCTTATGAAACTGTGACTGACGACCGTGGTGGTCTGCCACTGCTGGCACCAATGT
CTGAAGTAGCCGGTCGCATGTCTATTCAAGCCGGTGCCATGGCGCTGGAAAAGTCTGCCGGCGGCCGCGGTATGCTGCTG
GGTGGCGTACCGGGTGTTGAACCTGCCAAAGTGGTTATCATCGGTGGCGGTATGGTAGGTACCAACGCAGCTCAAATGGC
CGTAGGTATGGGCGCCGATGTAGTCGTTCTTGATCGCTCTATCGATGCACTGCGTCGTTTGAATGTACAGTTCGGCTCAT
CTGTGAAAGCCGTATACTCAACCGCTGATGCCATCGAGCGTCACGTACTGGAAGCTGATCTGGTTATCGGCGGCGTACTT
ATCCCTGGTGCTGCTGCGCCCAAGCTGGTTACTGCTGATATGATCAAGCGCATGAAAGCTGGCGCTGCTATCGTTGACGT
AGCTATCGACCAGGGCGGTTGTGTAGAAACTTCTCATGCTACCACCCACCAAGACCCAACCTATATTGTTGACGACGTGG
TTCACTACTGTGTAGCCAACATGCCAGGTGCCGTTGCCCGTACTTCTACCTTTGCGCTGAACAACGCCACCCTGCCCTAC
ATCATCAAGCTGGCAGACAAGGGCTACAAGGCTGCACTGCTGGCCGATAAGCACCTGCTGAACGGCCTCAACGTGATGCA
CGGCAAGATCACCTGTAAAGAGGTGGCCGAAGCCCATAACCTGTCTTACGTTCCAGCTTCTGAATTGCTGTAA

Upstream 100 bases:

>100_bases
AATACTATACTAGATATCCCTGAAATAATCACGTTCAGGTCACGACAAAATAACAAATTTGCCTGCGAAAAGCGGGTATT
TATGCAATTGAGGCTCGAAG

Downstream 100 bases:

>100_bases
TTTACCCAGATAAGGGTTAATAAAAGGGGAGCTTGGCTCCCCTTTTTCGTTTCCCGGGCCATGCACTGGAAACCCTAATA
GACAAGATAGATTAGGATCA

Product: alanine dehydrogenase

Products: NA

Alternate protein names: 40 kDa antigen; TB43 [H]

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MIIGVPKEIKNHEYRVGMVPSSVRELTLRGHAVFVEATAGSGIGFTDQDYIDAGATILGTAEEVFAKADMIVKVKEPQAV
ERAMLRHDQILFTYLHLAPDLPQTEELVSSGAVCIAYETVTDDRGGLPLLAPMSEVAGRMSIQAGAMALEKSAGGRGMLL
GGVPGVEPAKVVIIGGGMVGTNAAQMAVGMGADVVVLDRSIDALRRLNVQFGSSVKAVYSTADAIERHVLEADLVIGGVL
IPGAAAPKLVTADMIKRMKAGAAIVDVAIDQGGCVETSHATTHQDPTYIVDDVVHYCVANMPGAVARTSTFALNNATLPY
IIKLADKGYKAALLADKHLLNGLNVMHGKITCKEVAEAHNLSYVPASELL

Sequences:

>Translated_370_residues
MIIGVPKEIKNHEYRVGMVPSSVRELTLRGHAVFVEATAGSGIGFTDQDYIDAGATILGTAEEVFAKADMIVKVKEPQAV
ERAMLRHDQILFTYLHLAPDLPQTEELVSSGAVCIAYETVTDDRGGLPLLAPMSEVAGRMSIQAGAMALEKSAGGRGMLL
GGVPGVEPAKVVIIGGGMVGTNAAQMAVGMGADVVVLDRSIDALRRLNVQFGSSVKAVYSTADAIERHVLEADLVIGGVL
IPGAAAPKLVTADMIKRMKAGAAIVDVAIDQGGCVETSHATTHQDPTYIVDDVVHYCVANMPGAVARTSTFALNNATLPY
IIKLADKGYKAALLADKHLLNGLNVMHGKITCKEVAEAHNLSYVPASELL
>Mature_370_residues
MIIGVPKEIKNHEYRVGMVPSSVRELTLRGHAVFVEATAGSGIGFTDQDYIDAGATILGTAEEVFAKADMIVKVKEPQAV
ERAMLRHDQILFTYLHLAPDLPQTEELVSSGAVCIAYETVTDDRGGLPLLAPMSEVAGRMSIQAGAMALEKSAGGRGMLL
GGVPGVEPAKVVIIGGGMVGTNAAQMAVGMGADVVVLDRSIDALRRLNVQFGSSVKAVYSTADAIERHVLEADLVIGGVL
IPGAAAPKLVTADMIKRMKAGAAIVDVAIDQGGCVETSHATTHQDPTYIVDDVVHYCVANMPGAVARTSTFALNNATLPY
IIKLADKGYKAALLADKHLLNGLNVMHGKITCKEVAEAHNLSYVPASELL

Specific function: May play a role in cell wall synthesis as L-alanine is an important constituent of the peptidoglycan layer [H]

COG id: COG0686

COG function: function code E; Alanine dehydrogenase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AlaDH/PNT family [H]

Homologues:

Organism=Homo sapiens, GI122939155, Length=346, Percent_Identity=30.9248554913295, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI122939153, Length=346, Percent_Identity=30.9248554913295, Blast_Score=119, Evalue=3e-27,
Organism=Escherichia coli, GI1787887, Length=298, Percent_Identity=29.8657718120805, Blast_Score=103, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17550456, Length=350, Percent_Identity=28.2857142857143, Blast_Score=117, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007698
- InterPro:   IPR008142
- InterPro:   IPR008143
- InterPro:   IPR007886
- InterPro:   IPR008141 [H]

Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]

EC number: =1.4.1.1 [H]

Molecular weight: Translated: 38849; Mature: 38849

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00837 ALADH_PNT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIGVPKEIKNHEYRVGMVPSSVRELTLRGHAVFVEATAGSGIGFTDQDYIDAGATILGT
CEECCCHHHCCCCEEEECCCHHHHHEEECCEEEEEEECCCCCCCCCCCHHHHCCCEEECC
AEEVFAKADMIVKVKEPQAVERAMLRHDQILFTYLHLAPDLPQTEELVSSGAVCIAYETV
HHHHHHCCCEEEEECCCHHHHHHHHHHHHHEEEHHHHCCCCCHHHHHHHCCCEEEEEEEE
TDDRGGLPLLAPMSEVAGRMSIQAGAMALEKSAGGRGMLLGGVPGVEPAKVVIIGGGMVG
CCCCCCCEEECCHHHHHHHHEEHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCEEC
TNAAQMAVGMGADVVVLDRSIDALRRLNVQFGSSVKAVYSTADAIERHVLEADLVIGGVL
CCHHHHHHCCCCCEEEECCCHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEE
IPGAAAPKLVTADMIKRMKAGAAIVDVAIDQGGCVETSHATTHQDPTYIVDDVVHYCVAN
ECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHC
MPGAVARTSTFALNNATLPYIIKLADKGYKAALLADKHLLNGLNVMHGKITCKEVAEAHN
CCCCHHCCEEEEECCCCCEEEEEEECCCCEEEEEHHHHHHCCCCCCCCEEEHHHHHHHHC
LSYVPASELL
CCCCCHHHCC
>Mature Secondary Structure
MIIGVPKEIKNHEYRVGMVPSSVRELTLRGHAVFVEATAGSGIGFTDQDYIDAGATILGT
CEECCCHHHCCCCEEEECCCHHHHHEEECCEEEEEEECCCCCCCCCCCHHHHCCCEEECC
AEEVFAKADMIVKVKEPQAVERAMLRHDQILFTYLHLAPDLPQTEELVSSGAVCIAYETV
HHHHHHCCCEEEEECCCHHHHHHHHHHHHHEEEHHHHCCCCCHHHHHHHCCCEEEEEEEE
TDDRGGLPLLAPMSEVAGRMSIQAGAMALEKSAGGRGMLLGGVPGVEPAKVVIIGGGMVG
CCCCCCCEEECCHHHHHHHHEEHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCEEC
TNAAQMAVGMGADVVVLDRSIDALRRLNVQFGSSVKAVYSTADAIERHVLEADLVIGGVL
CCHHHHHHCCCCCEEEECCCHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEE
IPGAAAPKLVTADMIKRMKAGAAIVDVAIDQGGCVETSHATTHQDPTYIVDDVVHYCVAN
ECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHC
MPGAVARTSTFALNNATLPYIIKLADKGYKAALLADKHLLNGLNVMHGKITCKEVAEAHN
CCCCHHCCEEEEECCCCCEEEEEEECCCCEEEEEHHHHHHCCCCCCCCEEEHHHHHHHHC
LSYVPASELL
CCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1587598; 9634230; 12218036; 7822223 [H]