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The map label for this gene is yfiV [H]

Identifier: 119774891

GI number: 119774891

Start: 2147502

End: 2147930

Strand: Direct

Name: yfiV [H]

Synonym: Sama_1756

Alternate gene names: 119774891

Gene position: 2147502-2147930 (Clockwise)

Preceding gene: 119774890

Following gene: 119774892

Centisome position: 49.87

GC content: 52.68

Gene sequence:

>429_bases
ATGGATATCAATCAGGATTTAAATCGGGCTCTGGTGGAGTTCTTTGAAGGCATGGCGGCCTGGGAGCATCAATTGGTGGA
AGGCAGTGGTTTGTTGCTGCCGGTCATGCATACGCTGGAGCTACTGGGTCTTTACGGCCCCATGAGAATGACGGATTTGG
CGCATAAGCTCAGCATCAGTACCGGCACTCTCACCGCCCGCATCGATCGCATGGAGAAAGAGGGGCTTGTTACCCGGATT
GCCAATCCCGAAGACAGGCGCTCGCTGCTGATTGCGCTCACAGAGCAGGGCCTGGCGCACTTTTCTACCCACGATGAGGC
ACATCTTCATCTGACTGAAGATCTGATTGCGGCATTCAGTCCTGAAGATAAGCAAAACTTACTGGGCATGCTCGAGAAAA
TGAACCACCATTTCCGAAAGCCAGAATAG

Upstream 100 bases:

>100_bases
GGCCCTCATCGCAGGACTGAAACCGAACCAGAACGTATGGTGCCGCGCCCACTATCAAGATTTCGGCGCAGCGCCGTGAC
AAGAAGGAAGCCTTAACCAC

Downstream 100 bases:

>100_bases
TTGCACAGTTTCGATTCGACATACTGGCTGCATCAGGTAAAACATCTGTAACAGACGCTTACACTTCATTCACAGGTAAA
GTTGCCAAGCGGCGGAAAAT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDINQDLNRALVEFFEGMAAWEHQLVEGSGLLLPVMHTLELLGLYGPMRMTDLAHKLSISTGTLTARIDRMEKEGLVTRI
ANPEDRRSLLIALTEQGLAHFSTHDEAHLHLTEDLIAAFSPEDKQNLLGMLEKMNHHFRKPE

Sequences:

>Translated_142_residues
MDINQDLNRALVEFFEGMAAWEHQLVEGSGLLLPVMHTLELLGLYGPMRMTDLAHKLSISTGTLTARIDRMEKEGLVTRI
ANPEDRRSLLIALTEQGLAHFSTHDEAHLHLTEDLIAAFSPEDKQNLLGMLEKMNHHFRKPE
>Mature_142_residues
MDINQDLNRALVEFFEGMAAWEHQLVEGSGLLLPVMHTLELLGLYGPMRMTDLAHKLSISTGTLTARIDRMEKEGLVTRI
ANPEDRRSLLIALTEQGLAHFSTHDEAHLHLTEDLIAAFSPEDKQNLLGMLEKMNHHFRKPE

Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16094; Mature: 16094

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINQDLNRALVEFFEGMAAWEHQLVEGSGLLLPVMHTLELLGLYGPMRMTDLAHKLSIS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
TGTLTARIDRMEKEGLVTRIANPEDRRSLLIALTEQGLAHFSTHDEAHLHLTEDLIAAFS
CCHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCC
PEDKQNLLGMLEKMNHHFRKPE
CCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDINQDLNRALVEFFEGMAAWEHQLVEGSGLLLPVMHTLELLGLYGPMRMTDLAHKLSIS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
TGTLTARIDRMEKEGLVTRIANPEDRRSLLIALTEQGLAHFSTHDEAHLHLTEDLIAAFS
CCHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCC
PEDKQNLLGMLEKMNHHFRKPE
CCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]