| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is mdoG [H]
Identifier: 119774827
GI number: 119774827
Start: 2067034
End: 2068656
Strand: Direct
Name: mdoG [H]
Synonym: Sama_1691
Alternate gene names: 119774827
Gene position: 2067034-2068656 (Clockwise)
Preceding gene: 119774826
Following gene: 119774828
Centisome position: 48.0
GC content: 54.78
Gene sequence:
>1623_bases ATGGTTCGTTCTCCTCGCACCGCCAGTATCAAACCCAAGGCCGTGGCAGCCTTGCTGCTTGGCATGTCTGCTCTTTCCCC CATGCATCTCTTCGGCGCTGAGCCAGAGCAGGTGCAAACGGTAAAGCCTGCCGTTAAAGCGGAAATGCCGCCAAAGCCAA CCAAGCCAACTCAGGTGCGTTTTGCCAAAACCGGTAATTTTGATGCGGATACCGTTGTGCGCATCGCAAGACAGCTTGCA GCCAAACCCTATGTGGCTTTGAGCGATCCGCTCCCGCCTGGACTGGCTAACATCAGCTATGATGAGTACCGCGATATTCG CTTCAAGCCAGAGCAGGCCATTTGGAAGCAGGACGGGTTGCCCTATCAGATGCAACTCTTCCACCGTGGGTTCTATTTTC AGGATTTGATTGAAATCGCCATCGTCGAAGGCAAAAAGTCGACTCACCTGTCTTATGACCCGTCACTCTTCAGTGCCGGT GAAGTCATTCGTGAAAAGCTGCCCAATGAAGACATTGGTTACAGTGGTTTGCGGGTACATTATCCGCTGAACAGCAGCGA GTATTTTGATGAGCTCTTTGTGTTCCAGGGCGCCAGTTACTTCCGCGCCCTCGGTAAAGGCAATGCCTACGGCCTGTCTG CCCGTGGCCTTGCCATTAAAACCGCCGATCCGGCCGGTGAAGAATTCCCGGTCTTTCGCGCGTTTTGGATAGAAAAGCCC AATAACGAAACTAACCTCATTGTGGTTCATGCGCTGCTGGATAGCCCCAGCGTGGCCGGTGCATATCGTTTCTCCATCCG TCCCGGTGACAACACCCGTATGGATGTGGAAGCCGTGCTCTTCCCACGGGTAGAGCTTGCCAAAGTGGGTTTGGCCCCGA GCACCAGCATGTACATGCATTCTCCCAATGGCCGCCATCTCACAGACGATTTTCGCCCAGCGGTGCATGACTCAGACGGC CTGTTGATGATCAACGGCCGGGGTGAGCGTTTGTGGCGTCCGCTGGCAAATCCAAAGGATCTGCAGGTAAGTGCCTTTAT GGATAACTCCCCACAGGGCTTTGGTTTGCTGCAGCGTGAGCGCAACTATGTGAACTACCAGGATCTGGAAGCCAACTATG AGCGTCGTCCAAGCCTTTGGGTTGAGCCCGTGGGTAACTGGGGTGCCGGTGCCGTGGTTCTGACTGAAATCCCGACTCAG TCTGAAATTCACGACAACATTGTGGCCTTCTGGAAGCCTCGTCAGCCACTTGCGGCCGGCAGCGAGTACCGCTTTGCTTA CCATCTGTCCTGGGGTGCCAATCCTGTGCCAGTGGATAACAGCATTATCGTAAGCCGCAGTGCCAGTGGCCGTGCCGACA TTGCCAAGCCAACGCCAAAACGCCTGTTCGTGGTGGATTATGAGGTGAAAGGCGAGAAGCCCGCCAAGTTGCCCACGCCC AAGGTGGAAACCTCCGCAGGCGTTGTCAGCAATGTGGTTATCCGCGAAAACCCCAAATCAAAAGGCTATCGTTTGTCGTT TGAGTTTGACCCGGGTGAAACCAAACTGGCTGAGTTTCGTGCCGAGCTTAAGTTTGACGAACCCCGCAGCGTAGAAACCT GGCTGTACCGTTGGACGCTCTGA
Upstream 100 bases:
>100_bases AGCGGGCAACGATATTTTTGACATTAATTTTGGCATAAATTACATCGTCGCCTAAGCTATAAACACTCTTGTTTTCAACA CTTTTCGGGTCATTCTCCCT
Downstream 100 bases:
>100_bases GACAGGTATGACACACAAGTTGCTTGAAACTCCGTCTCCGGCCCTGGCCGGAGACACTGCCATGCCGCCGGAGCGTCCGG CGGATATGCCCACCCAGTCG
Product: glucan biosynthesis protein G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MVRSPRTASIKPKAVAALLLGMSALSPMHLFGAEPEQVQTVKPAVKAEMPPKPTKPTQVRFAKTGNFDADTVVRIARQLA AKPYVALSDPLPPGLANISYDEYRDIRFKPEQAIWKQDGLPYQMQLFHRGFYFQDLIEIAIVEGKKSTHLSYDPSLFSAG EVIREKLPNEDIGYSGLRVHYPLNSSEYFDELFVFQGASYFRALGKGNAYGLSARGLAIKTADPAGEEFPVFRAFWIEKP NNETNLIVVHALLDSPSVAGAYRFSIRPGDNTRMDVEAVLFPRVELAKVGLAPSTSMYMHSPNGRHLTDDFRPAVHDSDG LLMINGRGERLWRPLANPKDLQVSAFMDNSPQGFGLLQRERNYVNYQDLEANYERRPSLWVEPVGNWGAGAVVLTEIPTQ SEIHDNIVAFWKPRQPLAAGSEYRFAYHLSWGANPVPVDNSIIVSRSASGRADIAKPTPKRLFVVDYEVKGEKPAKLPTP KVETSAGVVSNVVIRENPKSKGYRLSFEFDPGETKLAEFRAELKFDEPRSVETWLYRWTL
Sequences:
>Translated_540_residues MVRSPRTASIKPKAVAALLLGMSALSPMHLFGAEPEQVQTVKPAVKAEMPPKPTKPTQVRFAKTGNFDADTVVRIARQLA AKPYVALSDPLPPGLANISYDEYRDIRFKPEQAIWKQDGLPYQMQLFHRGFYFQDLIEIAIVEGKKSTHLSYDPSLFSAG EVIREKLPNEDIGYSGLRVHYPLNSSEYFDELFVFQGASYFRALGKGNAYGLSARGLAIKTADPAGEEFPVFRAFWIEKP NNETNLIVVHALLDSPSVAGAYRFSIRPGDNTRMDVEAVLFPRVELAKVGLAPSTSMYMHSPNGRHLTDDFRPAVHDSDG LLMINGRGERLWRPLANPKDLQVSAFMDNSPQGFGLLQRERNYVNYQDLEANYERRPSLWVEPVGNWGAGAVVLTEIPTQ SEIHDNIVAFWKPRQPLAAGSEYRFAYHLSWGANPVPVDNSIIVSRSASGRADIAKPTPKRLFVVDYEVKGEKPAKLPTP KVETSAGVVSNVVIRENPKSKGYRLSFEFDPGETKLAEFRAELKFDEPRSVETWLYRWTL >Mature_540_residues MVRSPRTASIKPKAVAALLLGMSALSPMHLFGAEPEQVQTVKPAVKAEMPPKPTKPTQVRFAKTGNFDADTVVRIARQLA AKPYVALSDPLPPGLANISYDEYRDIRFKPEQAIWKQDGLPYQMQLFHRGFYFQDLIEIAIVEGKKSTHLSYDPSLFSAG EVIREKLPNEDIGYSGLRVHYPLNSSEYFDELFVFQGASYFRALGKGNAYGLSARGLAIKTADPAGEEFPVFRAFWIEKP NNETNLIVVHALLDSPSVAGAYRFSIRPGDNTRMDVEAVLFPRVELAKVGLAPSTSMYMHSPNGRHLTDDFRPAVHDSDG LLMINGRGERLWRPLANPKDLQVSAFMDNSPQGFGLLQRERNYVNYQDLEANYERRPSLWVEPVGNWGAGAVVLTEIPTQ SEIHDNIVAFWKPRQPLAAGSEYRFAYHLSWGANPVPVDNSIIVSRSASGRADIAKPTPKRLFVVDYEVKGEKPAKLPTP KVETSAGVVSNVVIRENPKSKGYRLSFEFDPGETKLAEFRAELKFDEPRSVETWLYRWTL
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]
COG id: COG3131
COG function: function code P; Periplasmic glucans biosynthesis protein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the opgD/opgG family [H]
Homologues:
Organism=Escherichia coli, GI1787286, Length=486, Percent_Identity=39.917695473251, Blast_Score=357, Evalue=1e-99, Organism=Escherichia coli, GI145693128, Length=500, Percent_Identity=36.2, Blast_Score=296, Evalue=3e-81,
Paralogues:
None
Copy number: 280 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014438 - InterPro: IPR007444 - InterPro: IPR011013 - InterPro: IPR014756 [H]
Pfam domain/function: PF04349 MdoG [H]
EC number: NA
Molecular weight: Translated: 60471; Mature: 60471
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRSPRTASIKPKAVAALLLGMSALSPMHLFGAEPEQVQTVKPAVKAEMPPKPTKPTQVR CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCHHHHCCCCCCCCCCCEEE FAKTGNFDADTVVRIARQLAAKPYVALSDPLPPGLANISYDEYRDIRFKPEQAIWKQDGL EEECCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHCCCCEECCHHHHHHCCCC PYQMQLFHRGFYFQDLIEIAIVEGKKSTHLSYDPSLFSAGEVIREKLPNEDIGYSGLRVH CHHHHHHHCCCCHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEE YPLNSSEYFDELFVFQGASYFRALGKGNAYGLSARGLAIKTADPAGEEFPVFRAFWIEKP ECCCCHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCEEEEEEEECC NNETNLIVVHALLDSPSVAGAYRFSIRPGDNTRMDVEAVLFPRVELAKVGLAPSTSMYMH CCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEECCEEEHHCCCCCCCEEEEE SPNGRHLTDDFRPAVHDSDGLLMINGRGERLWRPLANPKDLQVSAFMDNSPQGFGLLQRE CCCCCCCCCCCCCCEECCCCEEEEECCCHHHHCCCCCCCCEEEEEEECCCCCCCEEHHHH RNYVNYQDLEANYERRPSLWVEPVGNWGAGAVVLTEIPTQSEIHDNIVAFWKPRQPLAAG CCCCCEECCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHCCCEEEEECCCCCCCCC SEYRFAYHLSWGANPVPVDNSIIVSRSASGRADIAKPTPKRLFVVDYEVKGEKPAKLPTP CCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCC KVETSAGVVSNVVIRENPKSKGYRLSFEFDPGETKLAEFRAELKFDEPRSVETWLYRWTL CCCCCCCHHEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEECC >Mature Secondary Structure MVRSPRTASIKPKAVAALLLGMSALSPMHLFGAEPEQVQTVKPAVKAEMPPKPTKPTQVR CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCHHHHCCCCCCCCCCCEEE FAKTGNFDADTVVRIARQLAAKPYVALSDPLPPGLANISYDEYRDIRFKPEQAIWKQDGL EEECCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHCCCCEECCHHHHHHCCCC PYQMQLFHRGFYFQDLIEIAIVEGKKSTHLSYDPSLFSAGEVIREKLPNEDIGYSGLRVH CHHHHHHHCCCCHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEE YPLNSSEYFDELFVFQGASYFRALGKGNAYGLSARGLAIKTADPAGEEFPVFRAFWIEKP ECCCCHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCEEEEEEEECC NNETNLIVVHALLDSPSVAGAYRFSIRPGDNTRMDVEAVLFPRVELAKVGLAPSTSMYMH CCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEECCEEEHHCCCCCCCEEEEE SPNGRHLTDDFRPAVHDSDGLLMINGRGERLWRPLANPKDLQVSAFMDNSPQGFGLLQRE CCCCCCCCCCCCCCEECCCCEEEEECCCHHHHCCCCCCCCEEEEEEECCCCCCCEEHHHH RNYVNYQDLEANYERRPSLWVEPVGNWGAGAVVLTEIPTQSEIHDNIVAFWKPRQPLAAG CCCCCEECCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHCCCEEEEECCCCCCCCC SEYRFAYHLSWGANPVPVDNSIIVSRSASGRADIAKPTPKRLFVVDYEVKGEKPAKLPTP CCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCC KVETSAGVVSNVVIRENPKSKGYRLSFEFDPGETKLAEFRAELKFDEPRSVETWLYRWTL CCCCCCCHHEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA