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The map label for this gene is paiB [H]

Identifier: 119774794

GI number: 119774794

Start: 2025446

End: 2026105

Strand: Direct

Name: paiB [H]

Synonym: Sama_1658

Alternate gene names: 119774794

Gene position: 2025446-2026105 (Clockwise)

Preceding gene: 119774791

Following gene: 119774798

Centisome position: 47.04

GC content: 54.7

Gene sequence:

>660_bases
TTGTACATTCCCGCGCCCATGAGTCTCACCGATGCTGAGGCTGTGAGTTTAATCGATAGCCATCCCTTTGCCTTGCTTAT
CTCCAATCAGCAGAGGCTGGTGGCAAGCCATTTGCCACTGGTGTTTGACAGTGACAGACGCAGGATTATTGGGCATATGG
CGAGGGCCAACGGCCAATGGCGTGCCCTGGATGGCCAATCTGTGCTGGCGGTGTTTTCTGGCCCTCATGCCTACATAAGC
CCCCGTTGGTATCAGGCAAAACCCGCTGTACCGACCTGGAACTACAGTGCGGCCCATGTGTATGGCACCTTTAACTTGCT
TGACGAAAAAGAGGATGATGGTGGCGTTGAGGCCGTACTCAAGCACACCATCGCCCGATTTGAACCTGAGTTATGGGATG
ACGAGACCCTGATGCCCAAAGACTATGTTGGCAAACTGAGCAAGGCGATAGTCGCGTTTGAGATTGTGGTCGAACGCATC
GAGGCCAAGGCCAAACTGGGCCAGCATCGCAAGATGGGCGATCAAGAGGGTGTTTCGGCGGCGCTCAAGTCTTCCGAACG
GCTCGATGACATGGCCCTTTACCGTGAAATGCAGCGGATGGGACTGGGGCTGGGCACGGATAGCCAGACTGAACAAGTGG
ACCAAAGCAGAGAAAAGTAG

Upstream 100 bases:

>100_bases
TCTGTGTTACCGACTGAAATAGTTGCCATTTTTGTTATTGGGCTTGTGTGTGAATCTCTGGGTGTTAAGCTGCTGTTAGC
ATTAACAAACGGAGCCCAAA

Downstream 100 bases:

>100_bases
CCCACAGAGCGGCTGAGCGGTAGAAGCAGAGTAGAGCGGGGATGGCTGAGCAAATCATTGAAAGCTCCGCCGAGTCAGCT
TAAGTCTGGGCCCGGGAACG

Product: negative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MYIPAPMSLTDAEAVSLIDSHPFALLISNQQRLVASHLPLVFDSDRRRIIGHMARANGQWRALDGQSVLAVFSGPHAYIS
PRWYQAKPAVPTWNYSAAHVYGTFNLLDEKEDDGGVEAVLKHTIARFEPELWDDETLMPKDYVGKLSKAIVAFEIVVERI
EAKAKLGQHRKMGDQEGVSAALKSSERLDDMALYREMQRMGLGLGTDSQTEQVDQSREK

Sequences:

>Translated_219_residues
MYIPAPMSLTDAEAVSLIDSHPFALLISNQQRLVASHLPLVFDSDRRRIIGHMARANGQWRALDGQSVLAVFSGPHAYIS
PRWYQAKPAVPTWNYSAAHVYGTFNLLDEKEDDGGVEAVLKHTIARFEPELWDDETLMPKDYVGKLSKAIVAFEIVVERI
EAKAKLGQHRKMGDQEGVSAALKSSERLDDMALYREMQRMGLGLGTDSQTEQVDQSREK
>Mature_219_residues
MYIPAPMSLTDAEAVSLIDSHPFALLISNQQRLVASHLPLVFDSDRRRIIGHMARANGQWRALDGQSVLAVFSGPHAYIS
PRWYQAKPAVPTWNYSAAHVYGTFNLLDEKEDDGGVEAVLKHTIARFEPELWDDETLMPKDYVGKLSKAIVAFEIVVERI
EAKAKLGQHRKMGDQEGVSAALKSSERLDDMALYREMQRMGLGLGTDSQTEQVDQSREK

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322780, Length=88, Percent_Identity=38.6363636363636, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 24539; Mature: 24539

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIPAPMSLTDAEAVSLIDSHPFALLISNQQRLVASHLPLVFDSDRRRIIGHMARANGQW
CCCCCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHCCEEECCCHHHHHHHHHHCCCCE
RALDGQSVLAVFSGPHAYISPRWYQAKPAVPTWNYSAAHVYGTFNLLDEKEDDGGVEAVL
EEECCCEEEEEEECCCCEECCCEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHH
KHTIARFEPELWDDETLMPKDYVGKLSKAIVAFEIVVERIEAKAKLGQHRKMGDQEGVSA
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ALKSSERLDDMALYREMQRMGLGLGTDSQTEQVDQSREK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MYIPAPMSLTDAEAVSLIDSHPFALLISNQQRLVASHLPLVFDSDRRRIIGHMARANGQW
CCCCCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHCCEEECCCHHHHHHHHHHCCCCE
RALDGQSVLAVFSGPHAYISPRWYQAKPAVPTWNYSAAHVYGTFNLLDEKEDDGGVEAVL
EEECCCEEEEEEECCCCEECCCEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHH
KHTIARFEPELWDDETLMPKDYVGKLSKAIVAFEIVVERIEAKAKLGQHRKMGDQEGVSA
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ALKSSERLDDMALYREMQRMGLGLGTDSQTEQVDQSREK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]