| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is can [H]
Identifier: 119774778
GI number: 119774778
Start: 2008318
End: 2008929
Strand: Reverse
Name: can [H]
Synonym: Sama_1642
Alternate gene names: 119774778
Gene position: 2008929-2008318 (Counterclockwise)
Preceding gene: 119774779
Following gene: 119774777
Centisome position: 46.65
GC content: 55.07
Gene sequence:
>612_bases ATGAAACTACTCAAACCCTTGTTCGACAATAACCGTCGATGGGCACAGCGCATCCTGCAGGAAAACCCGGGCTTTTTCGA AACCCTGGCCAAGCAGCAAAACCCCGAATACCTGTGGATTGGTTGCTCCGATAGCCGAGTTCCCTCCAATCAAATCATTG ACTTGCTGCCCGGAGAGGTCTTTGTTCACCGTAATATCGCCAACATGGTGATCCACACCGACCTCAACTGTCTGTCGGTG CTTCAGTACGCAGTGGACGTGCTGCAGGTGAAACACATCATGGTGGTGGGCCATTACGGCTGCGGCGGCGTCCGTGCCGC CATGGGCAGCGCTCGCCTTGGCCTTATCGACAACTGGCTGGGTCATCTTCGTGATATACATCGCCTGCACAACGATGAGC TGACAAACCTTGACGATCAGGCACGCTTTGACCGCCTGTGCGAGCTCAATGTGATTGAGCAGGTGGCCAATGTCAGCGAA TCAAACATAGTCCAGGAAGCCTGGGCCCGCGGTCAGGAAGTCGCCATCCACGGTTGGATATATGGCATCACCAACGGACT GCTCACCGACCTGGATGTTACCGTCGACCGGGAGACCTTTCTTGGCCAATAA
Upstream 100 bases:
>100_bases GTATTTTCGTTTGGATCACAGCTTTTTAAGATGGATTGACCAGCCACGGGAAAATTTCCTGATACACTAGCGCCGAATTT CGCCAAATTACGACGACAAG
Downstream 100 bases:
>100_bases GGCTGAGTAAATCCACAGGCAGCCAGCGCGCTGCCTTTTTTGTTTTTTTTCGCCCTCCCCATCGCTATCACCTTGCCAAC ACAGGTATAATCTTCAGGTT
Product: carbonate dehydratase
Products: NA
Alternate protein names: Carbonate dehydratase 2 [H]
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MKLLKPLFDNNRRWAQRILQENPGFFETLAKQQNPEYLWIGCSDSRVPSNQIIDLLPGEVFVHRNIANMVIHTDLNCLSV LQYAVDVLQVKHIMVVGHYGCGGVRAAMGSARLGLIDNWLGHLRDIHRLHNDELTNLDDQARFDRLCELNVIEQVANVSE SNIVQEAWARGQEVAIHGWIYGITNGLLTDLDVTVDRETFLGQ
Sequences:
>Translated_203_residues MKLLKPLFDNNRRWAQRILQENPGFFETLAKQQNPEYLWIGCSDSRVPSNQIIDLLPGEVFVHRNIANMVIHTDLNCLSV LQYAVDVLQVKHIMVVGHYGCGGVRAAMGSARLGLIDNWLGHLRDIHRLHNDELTNLDDQARFDRLCELNVIEQVANVSE SNIVQEAWARGQEVAIHGWIYGITNGLLTDLDVTVDRETFLGQ >Mature_203_residues MKLLKPLFDNNRRWAQRILQENPGFFETLAKQQNPEYLWIGCSDSRVPSNQIIDLLPGEVFVHRNIANMVIHTDLNCLSV LQYAVDVLQVKHIMVVGHYGCGGVRAAMGSARLGLIDNWLGHLRDIHRLHNDELTNLDDQARFDRLCELNVIEQVANVSE SNIVQEAWARGQEVAIHGWIYGITNGLLTDLDVTVDRETFLGQ
Specific function: Unknown
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786318, Length=201, Percent_Identity=60.1990049751244, Blast_Score=258, Evalue=2e-70, Organism=Escherichia coli, GI1786534, Length=196, Percent_Identity=30.1020408163265, Blast_Score=93, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6324292, Length=194, Percent_Identity=31.9587628865979, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 23053; Mature: 23053
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS00705 PROK_CO2_ANHYDRASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLKPLFDNNRRWAQRILQENPGFFETLAKQQNPEYLWIGCSDSRVPSNQIIDLLPGEV CCCCHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCE FVHRNIANMVIHTDLNCLSVLQYAVDVLQVKHIMVVGHYGCGGVRAAMGSARLGLIDNWL EEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHCCCHHHHHHHHH GHLRDIHRLHNDELTNLDDQARFDRLCELNVIEQVANVSESNIVQEAWARGQEVAIHGWI HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEHHH YGITNGLLTDLDVTVDRETFLGQ HHHHCCHHCCCEEEECHHHHCCC >Mature Secondary Structure MKLLKPLFDNNRRWAQRILQENPGFFETLAKQQNPEYLWIGCSDSRVPSNQIIDLLPGEV CCCCHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCE FVHRNIANMVIHTDLNCLSVLQYAVDVLQVKHIMVVGHYGCGGVRAAMGSARLGLIDNWL EEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHCCCHHHHHHHHH GHLRDIHRLHNDELTNLDDQARFDRLCELNVIEQVANVSESNIVQEAWARGQEVAIHGWI HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEHHH YGITNGLLTDLDVTVDRETFLGQ HHHHCCHHCCCEEEECHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503; 10493123 [H]