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The map label for this gene is kanB [H]

Identifier: 119774777

GI number: 119774777

Start: 2006980

End: 2008167

Strand: Reverse

Name: kanB [H]

Synonym: Sama_1641

Alternate gene names: 119774777

Gene position: 2008167-2006980 (Counterclockwise)

Preceding gene: 119774778

Following gene: 119774776

Centisome position: 46.63

GC content: 53.87

Gene sequence:

>1188_bases
ATGCCCGGTTTTGAAATTTTTGGTCCTGAAGAAAAGCAGGAAGTCGCAGATGTTATGGAGCACGGCTTTACCTTCCGTTA
CAACTTCGATGGCATGCGCAATGACCGTTGGAAAAGCCGCGACTTTGAAGCGCTCTTATGTGAGAAGCTGAATGTCAAAC
ACGCTCACCTGCTCTCCAGCGGTACCAGTGCCCTCACTACCGCGCTGATGGCAGCCGGCATTGGTGCCGGTGATGAAGTG
ATTGTGCCCCCCTTTACCTTCGTGGCCTCGGTTGAAGCCATTATGATGGCGGGTGCGGTGCCTGTATTTGCCGAAATCGA
CGAGACCCTGTGTCTGTCACCGGAAGGCATTCGTGCTGCCATCACCCCACGTACCAAGGCCGTTAACTTTGTGCACATGT
GTGGCTCCATGGGCCACATGGCTGAAATCAAAGCCATCTGTGATGAGCATGGCATTATTCTGATGGAAGATGCCTGTCAG
GCCATCGGCGGCAGCTATCAGGGCCAGGCACTGGGTACCATTGGTCAGGTAGGTTGTTATTCTTTCGACTCAGTGAAAAC
CATTTCCTGTGGTGAAGGTGGCGCCGTAGTGACCAACGACGAAACCATCTACAACCACAGCCACATGTTCTCTGATCACG
GCCACGACCATATCGGTAACGACCGCGGCGCCGAGAAGCACCCCATCATGGGCATGAACTTCCGCATCAGCGAAATGAAT
GCCGCACTGGGCCTGGCACAGCTGCGCAAACTCGACACCATCCTCGACATTCAGCGTAAAAACAAAAAGCTGATTAAAGA
TGCCATGGCCGAGATTGCCGAAGTCAGCTTCCGCGTGATTCCAGACCCAGAGGGCGACAACGCAGGCTTCCTGTCATTTA
TGCTGCCCACCGAAGCACGCGCCCAGGAAATCAGCAAGGCCCTCGCGGCCAACGGTGTTGATGGCTGCTTCTACTGGTAT
GTGAACAACTGGCACTACCTGAAGAACTGGGACCACATCCACAACCTGAGTGCCCCGGCTGCCCTGCCCATCACTCTGGT
GGCCGACAAGCCTGACTACACCCAGATTTCTGTACCCAAATCTGACGCTATCATGAGCCGTACTATTTCCATGCTCATCA
AGCTCAGCTGGACTGAAGAACAGATCCAGGAACGTATTGCCAACATCAAGAAGGCCTTTGCCCAATAA

Upstream 100 bases:

>100_bases
CGCCCTCCCCATCGCTATCACCTTGCCAACACAGGTATAATCTTCAGGTTTTTTCATTGCGCCAAAGGCGCCATGTGTAG
AATTTAGGAGAATCACTTCC

Downstream 100 bases:

>100_bases
TAGACGGGAGTCTTTTGCAATGAAGTTCAGAAATTTCAAAGCTGTACCTAAGATGATCTTCGGTCGCGGCGCATTCAACC
AGCTCGACGAAGTACTGGCC

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: L-glutamine:DOI aminotransferase [H]

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MPGFEIFGPEEKQEVADVMEHGFTFRYNFDGMRNDRWKSRDFEALLCEKLNVKHAHLLSSGTSALTTALMAAGIGAGDEV
IVPPFTFVASVEAIMMAGAVPVFAEIDETLCLSPEGIRAAITPRTKAVNFVHMCGSMGHMAEIKAICDEHGIILMEDACQ
AIGGSYQGQALGTIGQVGCYSFDSVKTISCGEGGAVVTNDETIYNHSHMFSDHGHDHIGNDRGAEKHPIMGMNFRISEMN
AALGLAQLRKLDTILDIQRKNKKLIKDAMAEIAEVSFRVIPDPEGDNAGFLSFMLPTEARAQEISKALAANGVDGCFYWY
VNNWHYLKNWDHIHNLSAPAALPITLVADKPDYTQISVPKSDAIMSRTISMLIKLSWTEEQIQERIANIKKAFAQ

Sequences:

>Translated_395_residues
MPGFEIFGPEEKQEVADVMEHGFTFRYNFDGMRNDRWKSRDFEALLCEKLNVKHAHLLSSGTSALTTALMAAGIGAGDEV
IVPPFTFVASVEAIMMAGAVPVFAEIDETLCLSPEGIRAAITPRTKAVNFVHMCGSMGHMAEIKAICDEHGIILMEDACQ
AIGGSYQGQALGTIGQVGCYSFDSVKTISCGEGGAVVTNDETIYNHSHMFSDHGHDHIGNDRGAEKHPIMGMNFRISEMN
AALGLAQLRKLDTILDIQRKNKKLIKDAMAEIAEVSFRVIPDPEGDNAGFLSFMLPTEARAQEISKALAANGVDGCFYWY
VNNWHYLKNWDHIHNLSAPAALPITLVADKPDYTQISVPKSDAIMSRTISMLIKLSWTEEQIQERIANIKKAFAQ
>Mature_394_residues
PGFEIFGPEEKQEVADVMEHGFTFRYNFDGMRNDRWKSRDFEALLCEKLNVKHAHLLSSGTSALTTALMAAGIGAGDEVI
VPPFTFVASVEAIMMAGAVPVFAEIDETLCLSPEGIRAAITPRTKAVNFVHMCGSMGHMAEIKAICDEHGIILMEDACQA
IGGSYQGQALGTIGQVGCYSFDSVKTISCGEGGAVVTNDETIYNHSHMFSDHGHDHIGNDRGAEKHPIMGMNFRISEMNA
ALGLAQLRKLDTILDIQRKNKKLIKDAMAEIAEVSFRVIPDPEGDNAGFLSFMLPTEARAQEISKALAANGVDGCFYWYV
NNWHYLKNWDHIHNLSAPAALPITLVADKPDYTQISVPKSDAIMSRTISMLIKLSWTEEQIQERIANIKKAFAQ

Specific function: Catalyzes the PLP-dependent transamination of 2-deoxy- scyllo-inosose (DOI) to form 2-deoxy-scyllo-inosamine (DOIA) using L-glutamine as the amino donor [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. L-glutamine:2- deoxy-scyllo-inosose/scyllo-inosose aminotransferase subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=261, Percent_Identity=35.632183908046, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI2367285, Length=258, Percent_Identity=31.7829457364341, Blast_Score=122, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 43371; Mature: 43240

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGFEIFGPEEKQEVADVMEHGFTFRYNFDGMRNDRWKSRDFEALLCEKLNVKHAHLLSS
CCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHC
GTSALTTALMAAGIGAGDEVIVPPFTFVASVEAIMMAGAVPVFAEIDETLCLSPEGIRAA
CHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCCHHHHCCHHEECCCCCCEEE
ITPRTKAVNFVHMCGSMGHMAEIKAICDEHGIILMEDACQAIGGSYQGQALGTIGQVGCY
ECCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCCCCHHHHCCC
SFDSVKTISCGEGGAVVTNDETIYNHSHMFSDHGHDHIGNDRGAEKHPIMGMNFRISEMN
CCCCEEEEECCCCCEEEECCCEEECCCHHCCCCCCCCCCCCCCCCCCCEECCCEEEHHHH
AALGLAQLRKLDTILDIQRKNKKLIKDAMAEIAEVSFRVIPDPEGDNAGFLSFMLPTEAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCEEEEECCCHHH
AQEISKALAANGVDGCFYWYVNNWHYLKNWDHIHNLSAPAALPITLVADKPDYTQISVPK
HHHHHHHHHHCCCCEEEEEEECCEEEECCCHHHHCCCCCCCCEEEEEECCCCCCEEECCC
SDAIMSRTISMLIKLSWTEEQIQERIANIKKAFAQ
HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PGFEIFGPEEKQEVADVMEHGFTFRYNFDGMRNDRWKSRDFEALLCEKLNVKHAHLLSS
CCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHC
GTSALTTALMAAGIGAGDEVIVPPFTFVASVEAIMMAGAVPVFAEIDETLCLSPEGIRAA
CHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCCHHHHCCHHEECCCCCCEEE
ITPRTKAVNFVHMCGSMGHMAEIKAICDEHGIILMEDACQAIGGSYQGQALGTIGQVGCY
ECCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCCCCHHHHCCC
SFDSVKTISCGEGGAVVTNDETIYNHSHMFSDHGHDHIGNDRGAEKHPIMGMNFRISEMN
CCCCEEEEECCCCCEEEECCCEEECCCHHCCCCCCCCCCCCCCCCCCCEECCCEEEHHHH
AALGLAQLRKLDTILDIQRKNKKLIKDAMAEIAEVSFRVIPDPEGDNAGFLSFMLPTEAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCEEEEECCCHHH
AQEISKALAANGVDGCFYWYVNNWHYLKNWDHIHNLSAPAALPITLVADKPDYTQISVPK
HHHHHHHHHHCCCCEEEEEEECCEEEECCCHHHHCCCCCCCCEEEEEECCCCCCEEECCC
SDAIMSRTISMLIKLSWTEEQIQERIANIKKAFAQ
HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA