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The map label for this gene is ycbK [H]

Identifier: 119774750

GI number: 119774750

Start: 1971884

End: 1972375

Strand: Direct

Name: ycbK [H]

Synonym: Sama_1613

Alternate gene names: 119774750

Gene position: 1971884-1972375 (Clockwise)

Preceding gene: 119774749

Following gene: 119774751

Centisome position: 45.79

GC content: 48.37

Gene sequence:

>492_bases
ATGTTTTCTGTAATTTCATCGCCGGCGATGGCCAGCCGTTCTACCCAAGGCAGCAGGATGCTGAGTATGTTTAACCGCCA
CACCCAGGAAGAAGGTCAGGGAGCTTATTGGGTTGATGGTAAATATCAAAAAGAGATTTTGACCGACTTTGATCATCTTT
TGCGTGATCATCGAGCAAATATTGCAGCACCAATGGATAAGCGATTGTATGACCTGCTTTTTCATTTGCAGGAAAACCTA
AAAACCAAGGATACAATCCACATTATTTCCGGTTACCGCTCACCGCAGACCAATGCTATGTTGGCTAAAAAAAGTGGGGG
AGTGGCCAAGAAAAGCTTGCATATGGAAGGCAAGGCCATCGACATTGCCATACCGGGGATCCGTCTGGACCGACTGAGAG
ATGCCGCCAAAGAACTTAAGCTGGGTGGCGTTGGTTACTATCCCCAGTCTGGGTTTGTGCATGTGGACGTGGGGCGTGTG
CGCAGCTGGTAA

Upstream 100 bases:

>100_bases
ATTTTCTGGCTGTTTTGACCAAAAATAATACAAAGGTGACTGAGTGACAAAATTCTCTCCTGCTCGCAGGCAGTTAATGC
TTGGGCTGGGAAGCATGGCA

Downstream 100 bases:

>100_bases
CGGTTTTACACCAGGCGTCCAGTTCACTCAGCAGTACGCCATAGTCAGATAACAGAGAGCAACACCCGGTCCTGAGGCCT
GATTGCTCTCTGTTCATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MFSVISSPAMASRSTQGSRMLSMFNRHTQEEGQGAYWVDGKYQKEILTDFDHLLRDHRANIAAPMDKRLYDLLFHLQENL
KTKDTIHIISGYRSPQTNAMLAKKSGGVAKKSLHMEGKAIDIAIPGIRLDRLRDAAKELKLGGVGYYPQSGFVHVDVGRV
RSW

Sequences:

>Translated_163_residues
MFSVISSPAMASRSTQGSRMLSMFNRHTQEEGQGAYWVDGKYQKEILTDFDHLLRDHRANIAAPMDKRLYDLLFHLQENL
KTKDTIHIISGYRSPQTNAMLAKKSGGVAKKSLHMEGKAIDIAIPGIRLDRLRDAAKELKLGGVGYYPQSGFVHVDVGRV
RSW
>Mature_163_residues
MFSVISSPAMASRSTQGSRMLSMFNRHTQEEGQGAYWVDGKYQKEILTDFDHLLRDHRANIAAPMDKRLYDLLFHLQENL
KTKDTIHIISGYRSPQTNAMLAKKSGGVAKKSLHMEGKAIDIAIPGIRLDRLRDAAKELKLGGVGYYPQSGFVHVDVGRV
RSW

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=161, Percent_Identity=43.4782608695652, Blast_Score=138, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 18359; Mature: 18359

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSVISSPAMASRSTQGSRMLSMFNRHTQEEGQGAYWVDGKYQKEILTDFDHLLRDHRAN
CCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCC
IAAPMDKRLYDLLFHLQENLKTKDTIHIISGYRSPQTNAMLAKKSGGVAKKSLHMEGKAI
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHEECCCCEE
DIAIPGIRLDRLRDAAKELKLGGVGYYPQSGFVHVDVGRVRSW
EEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MFSVISSPAMASRSTQGSRMLSMFNRHTQEEGQGAYWVDGKYQKEILTDFDHLLRDHRAN
CCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCC
IAAPMDKRLYDLLFHLQENLKTKDTIHIISGYRSPQTNAMLAKKSGGVAKKSLHMEGKAI
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHEECCCCEE
DIAIPGIRLDRLRDAAKELKLGGVGYYPQSGFVHVDVGRVRSW
EEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]