| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is ggt [H]
Identifier: 119774703
GI number: 119774703
Start: 1909555
End: 1911327
Strand: Reverse
Name: ggt [H]
Synonym: Sama_1566
Alternate gene names: 119774703
Gene position: 1911327-1909555 (Counterclockwise)
Preceding gene: 119774704
Following gene: 119774701
Centisome position: 44.39
GC content: 55.89
Gene sequence:
>1773_bases ATGAAACCACGGCCCGGTGCCTTTACCTTAAAAGGGCTGACACTCGCCCTTGCCATCGCCCTGCCCTTTGCAGCGACATT TACCGCAGAGGCCAAACTGCCCACCAAGCCCACCTTGGATGACAGTGCCATCTTCAGTGAAATGGCCACCGCCCAGCCAA TATTTGGCAAGTACGGTATGGTCTCAAGTCAGGAAGCGCTGGCCACCCGCATCGGCGTGGATATCCTCAAAAAAGGCGGC AATGCCGTGGATGCGGCTGTTGCCGTAGGTTTTGCCCTGGCGGTAACCCTCCCCCGGGCCGGCAATCTCGGCGGCGGCGG TTTTATGCTGGTGCATCTGGCCAAAGACAATAAAACCATCGCCATCGATTACCGTGAAACGGCTCCAAAAGCCTCAAAAC GCGATATGTTCCTCGATGAAGCCGGCAATGCCGTGGATGAGTTGAGCCGCAGCCATGGGCTTGCTGTGGGCGTACCCGGC ACAGTAATGGGCATGGAACTGGCACTGAAAAAATACGGCACCATGAGCCTTTCGGAGGTTATTGCCCCTGCGATACAGCT CGCCCAAGACGGTGTGGAAGTCACCGCCGAGCTGGCGAGCTCCTTGGCAGGACTGCAAAACTGGATTGCCAGATGGCCCA CTTCTGCAGAGGTTTTTTACCCCAACGAGGGGCAAAACCTAACAGTGGGTCAGCGTCTGGTACAAAAAGATTTGGCCGAG AGCTTAAAACGCATCAGCAAGGCCGGTAGCAAAGGCTTTTATGAAGGAGAAACCGCCGAAAAACTGGTGGCTGCGGTACA GGAGGCCGGTGGCATCATGACCCTGGACGACCTAAAAGCCTACAAGGTGATGGAGCGCGAGCCGGTGCGTGGCAATTACC GAGGGCTGGAAGTCGTCTCCATGCCACCGCCAAGCTCAGGTGGCATTCACATCATTCAAATGCTCAATGTGCTTGAGCAC TTCCCCATGGGCGAGCTTGGCCATAACAGTGCCCAAAGCATTCACTTTATGGCCGAAACCATGAAGCGCGCCTATGCCGA TCGCAGTGAGTATCTGGGCGACCCTGACTTTGTGAACGTGCCGGTCCAGGCGCTGACCAGCAAGGCCTATGGCGATGCGA TTGCCAAGACCATAGCGGCCAATAAGGCGACCCCGTCCGATGACATCAAACCCGGAAAACTTGCCCCCTATGAGAGCGAC CAGACTACCCACTATTCGGTGGTCGATAAATGGGGCAATGCGGTATCGAACACCTATACCCTGAACTTCAGCTACGGCTC AGGCATGGTAGCCAGGGGTACCGGCATCCTCCTCAACAACGAGATGGATGATTTTGCCGCCAAACCCGGCAGTCCCAATG GTTACGGATTGCTCGGTGGCGATGCCAATGCGGTTGAACCACAAAAGCGGCCGCTGTCATCCATGAGCCCCACCATAGTG ATGAAAGACGGCAAGCCCTTTATCGTTACAGGCAGCCCCGGTGGTTCACGTATCATCAATACTGTGCTGCAAATCATTAT GAACGTGGTGGATTACGACCTGAACATCGCCGAGGCCAGCATTGCGCCGCGGATTCATCATCAGTGGTATCCCGATGAAA TCCGCACCGAGCGCAGCCTGAATGTGGATACCCGGCGTCTGCTTGAATCCATGGGCCACAAGGTCAACGTCAAACATGCC ATGGGCTCGACCCAGTCAATTGTGGTGACTGAAGAAGGCATCTATGGCGCCTCAGACACACGTCAAAGCGCCAGCGAAAC CCTGGGTTACTGA
Upstream 100 bases:
>100_bases AGACAAAAACCGTTGCAAAGCCAAACCGCAGCAGGCACAGTGACAACTTCATAAAATGTAAAAAATACAACACAAAGAAC ACGTTTTTGGGGGATCCAAC
Downstream 100 bases:
>100_bases CGTACGTTAAAACACGCGGACTGAAGCGCGTTGAATCGCACCTTTAATAAAAAAGCGCCTTTGAGGCGCTTTTTTACTTC CTGAAAACCGGCAGGCTGTA
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 590; Mature: 590
Protein sequence:
>590_residues MKPRPGAFTLKGLTLALAIALPFAATFTAEAKLPTKPTLDDSAIFSEMATAQPIFGKYGMVSSQEALATRIGVDILKKGG NAVDAAVAVGFALAVTLPRAGNLGGGGFMLVHLAKDNKTIAIDYRETAPKASKRDMFLDEAGNAVDELSRSHGLAVGVPG TVMGMELALKKYGTMSLSEVIAPAIQLAQDGVEVTAELASSLAGLQNWIARWPTSAEVFYPNEGQNLTVGQRLVQKDLAE SLKRISKAGSKGFYEGETAEKLVAAVQEAGGIMTLDDLKAYKVMEREPVRGNYRGLEVVSMPPPSSGGIHIIQMLNVLEH FPMGELGHNSAQSIHFMAETMKRAYADRSEYLGDPDFVNVPVQALTSKAYGDAIAKTIAANKATPSDDIKPGKLAPYESD QTTHYSVVDKWGNAVSNTYTLNFSYGSGMVARGTGILLNNEMDDFAAKPGSPNGYGLLGGDANAVEPQKRPLSSMSPTIV MKDGKPFIVTGSPGGSRIINTVLQIIMNVVDYDLNIAEASIAPRIHHQWYPDEIRTERSLNVDTRRLLESMGHKVNVKHA MGSTQSIVVTEEGIYGASDTRQSASETLGY
Sequences:
>Translated_590_residues MKPRPGAFTLKGLTLALAIALPFAATFTAEAKLPTKPTLDDSAIFSEMATAQPIFGKYGMVSSQEALATRIGVDILKKGG NAVDAAVAVGFALAVTLPRAGNLGGGGFMLVHLAKDNKTIAIDYRETAPKASKRDMFLDEAGNAVDELSRSHGLAVGVPG TVMGMELALKKYGTMSLSEVIAPAIQLAQDGVEVTAELASSLAGLQNWIARWPTSAEVFYPNEGQNLTVGQRLVQKDLAE SLKRISKAGSKGFYEGETAEKLVAAVQEAGGIMTLDDLKAYKVMEREPVRGNYRGLEVVSMPPPSSGGIHIIQMLNVLEH FPMGELGHNSAQSIHFMAETMKRAYADRSEYLGDPDFVNVPVQALTSKAYGDAIAKTIAANKATPSDDIKPGKLAPYESD QTTHYSVVDKWGNAVSNTYTLNFSYGSGMVARGTGILLNNEMDDFAAKPGSPNGYGLLGGDANAVEPQKRPLSSMSPTIV MKDGKPFIVTGSPGGSRIINTVLQIIMNVVDYDLNIAEASIAPRIHHQWYPDEIRTERSLNVDTRRLLESMGHKVNVKHA MGSTQSIVVTEEGIYGASDTRQSASETLGY >Mature_590_residues MKPRPGAFTLKGLTLALAIALPFAATFTAEAKLPTKPTLDDSAIFSEMATAQPIFGKYGMVSSQEALATRIGVDILKKGG NAVDAAVAVGFALAVTLPRAGNLGGGGFMLVHLAKDNKTIAIDYRETAPKASKRDMFLDEAGNAVDELSRSHGLAVGVPG TVMGMELALKKYGTMSLSEVIAPAIQLAQDGVEVTAELASSLAGLQNWIARWPTSAEVFYPNEGQNLTVGQRLVQKDLAE SLKRISKAGSKGFYEGETAEKLVAAVQEAGGIMTLDDLKAYKVMEREPVRGNYRGLEVVSMPPPSSGGIHIIQMLNVLEH FPMGELGHNSAQSIHFMAETMKRAYADRSEYLGDPDFVNVPVQALTSKAYGDAIAKTIAANKATPSDDIKPGKLAPYESD QTTHYSVVDKWGNAVSNTYTLNFSYGSGMVARGTGILLNNEMDDFAAKPGSPNGYGLLGGDANAVEPQKRPLSSMSPTIV MKDGKPFIVTGSPGGSRIINTVLQIIMNVVDYDLNIAEASIAPRIHHQWYPDEIRTERSLNVDTRRLLESMGHKVNVKHA MGSTQSIVVTEEGIYGASDTRQSASETLGY
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=539, Percent_Identity=33.0241187384045, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI73915090, Length=539, Percent_Identity=33.0241187384045, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI73915096, Length=539, Percent_Identity=33.0241187384045, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI73915094, Length=539, Percent_Identity=33.0241187384045, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI113429324, Length=529, Percent_Identity=31.9470699432892, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI113429326, Length=534, Percent_Identity=31.6479400749064, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI109148539, Length=590, Percent_Identity=31.6949152542373, Blast_Score=203, Evalue=4e-52, Organism=Homo sapiens, GI153266885, Length=569, Percent_Identity=28.1195079086116, Blast_Score=139, Evalue=8e-33, Organism=Homo sapiens, GI153266901, Length=570, Percent_Identity=28.0701754385965, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI153266907, Length=569, Percent_Identity=26.5377855887522, Blast_Score=117, Evalue=4e-26, Organism=Homo sapiens, GI30581157, Length=229, Percent_Identity=34.9344978165939, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI30581155, Length=229, Percent_Identity=34.9344978165939, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI218505805, Length=228, Percent_Identity=32.4561403508772, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI310124095, Length=228, Percent_Identity=30.7017543859649, Blast_Score=84, Evalue=4e-16, Organism=Escherichia coli, GI1789856, Length=540, Percent_Identity=59.6296296296296, Blast_Score=638, Evalue=0.0, Organism=Caenorhabditis elegans, GI72000294, Length=546, Percent_Identity=33.5164835164835, Blast_Score=265, Evalue=5e-71, Organism=Caenorhabditis elegans, GI212646519, Length=546, Percent_Identity=33.5164835164835, Blast_Score=265, Evalue=5e-71, Organism=Caenorhabditis elegans, GI17506189, Length=592, Percent_Identity=31.4189189189189, Blast_Score=240, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17542894, Length=544, Percent_Identity=30.5147058823529, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI193208247, Length=565, Percent_Identity=29.2035398230088, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI193208245, Length=565, Percent_Identity=29.2035398230088, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17564448, Length=437, Percent_Identity=26.0869565217391, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI72001497, Length=352, Percent_Identity=25.2840909090909, Blast_Score=86, Evalue=7e-17, Organism=Caenorhabditis elegans, GI72001495, Length=352, Percent_Identity=25.2840909090909, Blast_Score=85, Evalue=9e-17, Organism=Saccharomyces cerevisiae, GI6323330, Length=517, Percent_Identity=29.7872340425532, Blast_Score=177, Evalue=5e-45, Organism=Drosophila melanogaster, GI24642670, Length=539, Percent_Identity=31.5398886827458, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI24642666, Length=539, Percent_Identity=31.5398886827458, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI45551474, Length=539, Percent_Identity=31.5398886827458, Blast_Score=222, Evalue=6e-58, Organism=Drosophila melanogaster, GI161077880, Length=539, Percent_Identity=31.5398886827458, Blast_Score=222, Evalue=6e-58, Organism=Drosophila melanogaster, GI161077878, Length=539, Percent_Identity=31.5398886827458, Blast_Score=221, Evalue=8e-58, Organism=Drosophila melanogaster, GI161077496, Length=507, Percent_Identity=31.5581854043393, Blast_Score=215, Evalue=8e-56, Organism=Drosophila melanogaster, GI18859893, Length=515, Percent_Identity=31.4563106796116, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI18859741, Length=538, Percent_Identity=27.6951672862454, Blast_Score=173, Evalue=3e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 63031; Mature: 63031
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS00462 G_GLU_TRANSPEPTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPRPGAFTLKGLTLALAIALPFAATFTAEAKLPTKPTLDDSAIFSEMATAQPIFGKYGM CCCCCCCEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC VSSQEALATRIGVDILKKGGNAVDAAVAVGFALAVTLPRAGNLGGGGFMLVHLAKDNKTI CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEECCCCEE AIDYRETAPKASKRDMFLDEAGNAVDELSRSHGLAVGVPGTVMGMELALKKYGTMSLSEV EEEECCCCCCCCCCCCHHHHCCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCHHHH IAPAIQLAQDGVEVTAELASSLAGLQNWIARWPTSAEVFYPNEGQNLTVGQRLVQKDLAE HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHH SLKRISKAGSKGFYEGETAEKLVAAVQEAGGIMTLDDLKAYKVMEREPVRGNYRGLEVVS HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCEEEEE MPPPSSGGIHIIQMLNVLEHFPMGELGHNSAQSIHFMAETMKRAYADRSEYLGDPDFVNV CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECC PVQALTSKAYGDAIAKTIAANKATPSDDIKPGKLAPYESDQTTHYSVVDKWGNAVSNTYT CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEE LNFSYGSGMVARGTGILLNNEMDDFAAKPGSPNGYGLLGGDANAVEPQKRPLSSMSPTIV EEEECCCCEEECCCEEEECCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEE MKDGKPFIVTGSPGGSRIINTVLQIIMNVVDYDLNIAEASIAPRIHHQWYPDEIRTERSL EECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCCCHHHCCCCCC NVDTRRLLESMGHKVNVKHAMGSTQSIVVTEEGIYGASDTRQSASETLGY CHHHHHHHHHCCCEEEEHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MKPRPGAFTLKGLTLALAIALPFAATFTAEAKLPTKPTLDDSAIFSEMATAQPIFGKYGM CCCCCCCEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC VSSQEALATRIGVDILKKGGNAVDAAVAVGFALAVTLPRAGNLGGGGFMLVHLAKDNKTI CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEECCCCEE AIDYRETAPKASKRDMFLDEAGNAVDELSRSHGLAVGVPGTVMGMELALKKYGTMSLSEV EEEECCCCCCCCCCCCHHHHCCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCHHHH IAPAIQLAQDGVEVTAELASSLAGLQNWIARWPTSAEVFYPNEGQNLTVGQRLVQKDLAE HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHH SLKRISKAGSKGFYEGETAEKLVAAVQEAGGIMTLDDLKAYKVMEREPVRGNYRGLEVVS HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCEEEEE MPPPSSGGIHIIQMLNVLEHFPMGELGHNSAQSIHFMAETMKRAYADRSEYLGDPDFVNV CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECC PVQALTSKAYGDAIAKTIAANKATPSDDIKPGKLAPYESDQTTHYSVVDKWGNAVSNTYT CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEE LNFSYGSGMVARGTGILLNNEMDDFAAKPGSPNGYGLLGGDANAVEPQKRPLSSMSPTIV EEEECCCCEEECCCEEEECCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEE MKDGKPFIVTGSPGGSRIINTVLQIIMNVVDYDLNIAEASIAPRIHHQWYPDEIRTERSL EECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCCCHHHCCCCCC NVDTRRLLESMGHKVNVKHAMGSTQSIVVTEEGIYGASDTRQSASETLGY CHHHHHHHHHCCCEEEEHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2570061; 9278503; 8041620; 1360205 [H]