| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is ackA
Identifier: 119774632
GI number: 119774632
Start: 1809919
End: 1811118
Strand: Reverse
Name: ackA
Synonym: Sama_1495
Alternate gene names: 119774632
Gene position: 1811118-1809919 (Counterclockwise)
Preceding gene: 119774634
Following gene: 119774631
Centisome position: 42.06
GC content: 53.67
Gene sequence:
>1200_bases ATGTCCAATACTTTGGTTCTGGTACTCAACTGTGGCAGTTCTTCACTGAAGTTTGCCATTCTGGACGCCACCAATGGCGA CGAAAAAATTTCCGGTTTGGCCGAGTGCTTTGGTCTGGAAAATGCCCGCATCAAGTGGAAATTACGCGGCGAGAAACACG AAGCCAGTTTGGGCGCCTTCAGCGCTCACCGCGAAGCGGTGGAATACATAGTCAACAAAATTCTGGTGAATGAGCCTGAA CTGAAAGGCCAACTTATCGCCATTGGCCACCGTATCGTGCACGGCGGAGAAAAGTTCACCCACTCCGTCATTATCGATGA TGCCGTACTCAAGGGTATCGAAGACTGTGCCTCGCTGGCGCCACTCCATAACCCTGCGCACCTTATCGGTATTCGTGCGG CCCAGGCCTCTTTCCCGTCGCTGCCTCAAGTTGCCGTGTTCGATACCGCCTTCCACCAGAGTATGCCAGACCGGGCCTAT ATCTATGCCCTGCCCTACAAGCTCTATCGTGAGCACGGTATCCGCCGCTACGGCATGCACGGTACCAGCCACTTGTTCGT AAGCCGTGAAGCCGCCAAGGCCCTAGGCAAAGACGTGAACGACACCAATGTGATTTGTGCCCATCTGGGTAACGGTGCCT CTGTAACGGCAGTGAAAGGCGGCAAGAGTGTAGACACCTCTATGGGTCTGACCCCGCTGGAAGGTCTGGTAATGGGAACT CGCTGTGGCGATCTGGATCCCTCCATCATCTACCACCTGGTGCATCAGCTGGGTTACACCCTGGATGAAGTGAACAACCT GATGAACAAACAGAGTGGTTTGCTCGGTATTTCTGAGCTCACCAACGATTGTCGCGGTATCGAAGAAGGCTACGCCGAAG GCCACAAGGGTGCGACTCTGGCATTGGAGATCTTCTGCTACCGTCTGGCCAAATACATCGCCTCCTATACAGTGCCACTG GGCCGTCTGGATGCCATCGTATTCACCGGCGGCATCGGCGAAAACTCTGACCTTATCCGTGAAAAGGTTTTGAATCTGCT TGAAATCTTTAAGTTTGAAGTTGACAGCGAGCGCAATAAGGCAGCCCGCTTCGGTAACCAGGGCGTGATTACCAAAGAGG GCAGTCCCATTGCCATGGTGATCCCCACCAACGAAGAGTGGGTCATCGCCGAAGACTCGCTGCGTCTGGTTAACAAATAA
Upstream 100 bases:
>100_bases GCTCAGGGAAGCAGATGAGAAGTTTTAATGGCCTGCCCGCCAGGCAAAGTCGCCGGAGCAAGACCCGGCCAACTATTTCA TGACGCAAGAAGGTTTTATC
Downstream 100 bases:
>100_bases GGCGCCCGCCGCCCCGGGACTCCCGCGGGCGGATTTGCATTAAAAGCATCTGATGGCCCGACCATCAAAGCAACACCCTA AGAGGTACTTTATGTCCCGC
Product: acetate kinase
Products: NA
Alternate protein names: Acetokinase
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSNTLVLVLNCGSSSLKFAILDATNGDEKISGLAECFGLENARIKWKLRGEKHEASLGAFSAHREAVEYIVNKILVNEPE LKGQLIAIGHRIVHGGEKFTHSVIIDDAVLKGIEDCASLAPLHNPAHLIGIRAAQASFPSLPQVAVFDTAFHQSMPDRAY IYALPYKLYREHGIRRYGMHGTSHLFVSREAAKALGKDVNDTNVICAHLGNGASVTAVKGGKSVDTSMGLTPLEGLVMGT RCGDLDPSIIYHLVHQLGYTLDEVNNLMNKQSGLLGISELTNDCRGIEEGYAEGHKGATLALEIFCYRLAKYIASYTVPL GRLDAIVFTGGIGENSDLIREKVLNLLEIFKFEVDSERNKAARFGNQGVITKEGSPIAMVIPTNEEWVIAEDSLRLVNK
Sequences:
>Translated_399_residues MSNTLVLVLNCGSSSLKFAILDATNGDEKISGLAECFGLENARIKWKLRGEKHEASLGAFSAHREAVEYIVNKILVNEPE LKGQLIAIGHRIVHGGEKFTHSVIIDDAVLKGIEDCASLAPLHNPAHLIGIRAAQASFPSLPQVAVFDTAFHQSMPDRAY IYALPYKLYREHGIRRYGMHGTSHLFVSREAAKALGKDVNDTNVICAHLGNGASVTAVKGGKSVDTSMGLTPLEGLVMGT RCGDLDPSIIYHLVHQLGYTLDEVNNLMNKQSGLLGISELTNDCRGIEEGYAEGHKGATLALEIFCYRLAKYIASYTVPL GRLDAIVFTGGIGENSDLIREKVLNLLEIFKFEVDSERNKAARFGNQGVITKEGSPIAMVIPTNEEWVIAEDSLRLVNK >Mature_398_residues SNTLVLVLNCGSSSLKFAILDATNGDEKISGLAECFGLENARIKWKLRGEKHEASLGAFSAHREAVEYIVNKILVNEPEL KGQLIAIGHRIVHGGEKFTHSVIIDDAVLKGIEDCASLAPLHNPAHLIGIRAAQASFPSLPQVAVFDTAFHQSMPDRAYI YALPYKLYREHGIRRYGMHGTSHLFVSREAAKALGKDVNDTNVICAHLGNGASVTAVKGGKSVDTSMGLTPLEGLVMGTR CGDLDPSIIYHLVHQLGYTLDEVNNLMNKQSGLLGISELTNDCRGIEEGYAEGHKGATLALEIFCYRLAKYIASYTVPLG RLDAIVFTGGIGENSDLIREKVLNLLEIFKFEVDSERNKAARFGNQGVITKEGSPIAMVIPTNEEWVIAEDSLRLVNK
Specific function: Involved In The Activation Of Acetate To Acetyl CoA And The Secretion Of Acetate. During Anaerobic Growth Of The Organism, This Enzyme Is Also Involved In The Synthesis Of Most Of The ATP Formed Catabolically. [C]
COG id: COG0282
COG function: function code C; Acetate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family
Homologues:
Organism=Escherichia coli, GI1788633, Length=400, Percent_Identity=64, Blast_Score=530, Evalue=1e-152, Organism=Escherichia coli, GI145693184, Length=393, Percent_Identity=46.3104325699746, Blast_Score=346, Evalue=2e-96,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): ACKA_SHEAM (A1S5P6)
Other databases:
- EMBL: CP000507 - RefSeq: YP_927372.1 - ProteinModelPortal: A1S5P6 - SMR: A1S5P6 - STRING: A1S5P6 - GeneID: 4603747 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_1495 - NMPDR: fig|326297.7.peg.1411 - eggNOG: COG0282 - HOGENOM: HBG285863 - OMA: PHLKDKN - PhylomeDB: A1S5P6 - ProtClustDB: PRK00180 - GO: GO:0005737 - HAMAP: MF_00020 - InterPro: IPR000890 - InterPro: IPR004372 - PANTHER: PTHR21060 - PANTHER: PTHR21060:SF11 - PIRSF: PIRSF000722 - PRINTS: PR00471 - TIGRFAMs: TIGR00016
Pfam domain/function: PF00871 Acetate_kinase
EC number: =2.7.2.1
Molecular weight: Translated: 43424; Mature: 43293
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS01075 ACETATE_KINASE_1; PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTLVLVLNCGSSSLKFAILDATNGDEKISGLAECFGLENARIKWKLRGEKHEASLGAF CCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHH SAHREAVEYIVNKILVNEPELKGQLIAIGHRIVHGGEKFTHSVIIDDAVLKGIEDCASLA HHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHEECCCHHHHEEEEHHHHHHHHHHHHHHC PLHNPAHLIGIRAAQASFPSLPQVAVFDTAFHQSMPDRAYIYALPYKLYREHGIRRYGMH CCCCCHHEEEEEEHHCCCCCCCCHHEEHHHHHHCCCCCEEEEECCHHHHHHCCCEEECCC GTSHLFVSREAAKALGKDVNDTNVICAHLGNGASVTAVKGGKSVDTSMGLTPLEGLVMGT CCCEEEEEHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHEEEEC RCGDLDPSIIYHLVHQLGYTLDEVNNLMNKQSGLLGISELTNDCRGIEEGYAEGHKGATL CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCCCCHH ALEIFCYRLAKYIASYTVPLGRLDAIVFTGGIGENSDLIREKVLNLLEIFKFEVDSERNK HHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH AARFGNQGVITKEGSPIAMVIPTNEEWVIAEDSLRLVNK HHHCCCCCEEEECCCCEEEEEECCCCEEEECCCHHHCCC >Mature Secondary Structure SNTLVLVLNCGSSSLKFAILDATNGDEKISGLAECFGLENARIKWKLRGEKHEASLGAF CCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHH SAHREAVEYIVNKILVNEPELKGQLIAIGHRIVHGGEKFTHSVIIDDAVLKGIEDCASLA HHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHEECCCHHHHEEEEHHHHHHHHHHHHHHC PLHNPAHLIGIRAAQASFPSLPQVAVFDTAFHQSMPDRAYIYALPYKLYREHGIRRYGMH CCCCCHHEEEEEEHHCCCCCCCCHHEEHHHHHHCCCCCEEEEECCHHHHHHCCCEEECCC GTSHLFVSREAAKALGKDVNDTNVICAHLGNGASVTAVKGGKSVDTSMGLTPLEGLVMGT CCCEEEEEHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHEEEEC RCGDLDPSIIYHLVHQLGYTLDEVNNLMNKQSGLLGISELTNDCRGIEEGYAEGHKGATL CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCCCCHH ALEIFCYRLAKYIASYTVPLGRLDAIVFTGGIGENSDLIREKVLNLLEIFKFEVDSERNK HHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH AARFGNQGVITKEGSPIAMVIPTNEEWVIAEDSLRLVNK HHHCCCCCEEEECCCCEEEEEECCCCEEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA