| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is pta [H]
Identifier: 119774631
GI number: 119774631
Start: 1807689
End: 1809827
Strand: Reverse
Name: pta [H]
Synonym: Sama_1494
Alternate gene names: 119774631
Gene position: 1809827-1807689 (Counterclockwise)
Preceding gene: 119774632
Following gene: 119774630
Centisome position: 42.03
GC content: 57.41
Gene sequence:
>2139_bases ATGTCCCGCAACATCATGTTGGTTCCCATTGGTACAGGCGTTGGCCTCACCTCTCTGAGCCTGGGTATGGTGCGCGCACT GGAACGCCATGGCGTAAAAGTGCAGTTTTTCAAGCCCATCAGCCAGCAGCGCCCTGCCGATTCAGGCCCTGAACGCTCAA CCACTATCCTGTCCAAGTCGCCCACGGTGAACCCGTTGGAGCCCTTTGACATGCAGCACGCCGAGTCGCTTATCCGTACC GACCAGACCGATGTGCTGATGGAGCAAATCATTGCCCGCGCCAGCGAAATTGCAGCCAACACCGAGACGCTTATCATCGA AGGTTTGGTGCCAACCCGCAGCCACTCCTTCTCCGATGACGTGAACTACGCTATCGCCAAGGCATTGGATGCGGACGTGA TTTTCATTGCCACCCCGGGTAACGACACCCCGAACGCGCTGATGAACCGTTTGGAAATTGCCTACAACAGCTGGGGCGGC GCCAAGAACAAACGCCTGATTGGCGCCGTGATCAACAAGATTGGTGCACCTGTGGATGACGAAGGCCGCACCCGACCTGA CTTGTCTGAAGTGTTCGACCATCAGGACATCCAGAAAGGTGATGCCACGGCCATGTTCCAGCTGCCAGGCAAGAGCAAGC TGCGTATTCTGGGCAGTGTGCCTTACAATCTGGATCTGGTGTCTCCCCGCGCATCAGACCTTGCCAAGCACTTGCATGCA CGCATCCTCAATGCCGGTGAAATGAACACCCGTCGCCTGCGTAAAGTGACCTTCTGTGCCCGCTCCATTCCCAACATGCT GAGTCACTTCCGTACCGACTCGCTGCTGGTGACCTCGGGCGACCGCTCCGATGTGATTGTGGCAGCCTGCCTTGCGGCGA TGAATGGCGTGAAGATTGGCGCGCTGCTGCTTACCGGCTCCTACGAGCCAGAGCCGGAAGTACTGAAGCTGTGCGAACAG GCATTCGAGACCGGTCTGCCGGTGTTTATGATAGACACCAACACCTGGCAAACCTCACTCAATATTCAGCGCTTTAACCA CGAAGTGCCCGTGGACGATGCAGTGCGAATTGAGCTGGTGCAGGAATATGTGGCAAGCCACATCGACCAGAGCTGGATTG AAAGCGTGACCGAAAACTCGCCACGCGAACACCGCCTGTCGCCACCGGCCTTCCGCTACAAGCTTACTGAGCTGGCCCGC GCCGCCAAAAAGTGCATCGTACTGCCTGAAGGCGACGAGCCACGCACCATCAAGGCCGCCAGCATCTGTGCCGAGCGCGG CATCGCCCGCTGTGTACTGCTGGGTAAGAAAGACGATATTTTACGTATTGCCGCAGCACAGGATGTGGTGCTCGGTGAAG GTGTGGAAATTCTCGACCCAGAGGATATTCGCGAGCAATATGTTGAGCCCATGCTCAACCTGCGTCGCCACAAAGGACTT ACCGAAGTGGTTGCCCGTGAGCAACTGGAAGACAACATGGTACTGGCGACCATGATGCTGGCCGAAGATGAAGTGGACGG CATAGTATCAGGCGCGGTAAACACCACCGCCAATACCATTCGTCCACCGCTGCAGCTGATTAAAACCGCCCCCGGCTCAA GCCTGGTATCCTCAATCTTCTTTATGCTGATGCCGGATCAGGTGCTGGTATACGGTGACTGCGCCATTAACCCGGATCCG AACGCCGAGCAACTGGCCGATATCGCCATTCAGTCGGCAGAGTCTGCCAAGGCCTTCGGCATTGAGCCCCGTGTCGCCAT GATAAGCTACTCAACCGGTAACTCGGGCACGGGCTCCGATGTGGACAAGGTTCGCGAAGCTACTCGCATTGCCAAAGAGA AACGCCCCGATCTGGTTATCGATGGCCCGCTGCAGTATGACGCGGCCGTGATGCCAAACGTGGCCCGGTCCAAGGCACCC GACAGCCCTGTGGCCGGTAAGGCTACCGTGTTTGTGTTCCCCGATCTCAACACGGGTAACACCACCTATAAAGCCGTACA GCGAAGCGCTGAGCTTATCAGTATTGGCCCTATGCTGCAGGGCATGAGAAAGCCGGTGAACGACCTGTCCCGCGGCGCCT TGGTAGACGATATCGTCTACACCATCGCCCTGACCGCTATTCAGGCGACGCAGCAGTAG
Upstream 100 bases:
>100_bases AACAAATAAGGCGCCCGCCGCCCCGGGACTCCCGCGGGCGGATTTGCATTAAAAGCATCTGATGGCCCGACCATCAAAGC AACACCCTAAGAGGTACTTT
Downstream 100 bases:
>100_bases TAAGCCTGCAACCCATAATAAAAACGCCGTCTATTGATGGCGTTTTTTTATGGCTCGCCAATTGACGGCATATGCGATCC ACCGGCATTAGAGGGATCAG
Product: phosphate acetyltransferase
Products: NA
Alternate protein names: Phosphotransacetylase [H]
Number of amino acids: Translated: 712; Mature: 711
Protein sequence:
>712_residues MSRNIMLVPIGTGVGLTSLSLGMVRALERHGVKVQFFKPISQQRPADSGPERSTTILSKSPTVNPLEPFDMQHAESLIRT DQTDVLMEQIIARASEIAANTETLIIEGLVPTRSHSFSDDVNYAIAKALDADVIFIATPGNDTPNALMNRLEIAYNSWGG AKNKRLIGAVINKIGAPVDDEGRTRPDLSEVFDHQDIQKGDATAMFQLPGKSKLRILGSVPYNLDLVSPRASDLAKHLHA RILNAGEMNTRRLRKVTFCARSIPNMLSHFRTDSLLVTSGDRSDVIVAACLAAMNGVKIGALLLTGSYEPEPEVLKLCEQ AFETGLPVFMIDTNTWQTSLNIQRFNHEVPVDDAVRIELVQEYVASHIDQSWIESVTENSPREHRLSPPAFRYKLTELAR AAKKCIVLPEGDEPRTIKAASICAERGIARCVLLGKKDDILRIAAAQDVVLGEGVEILDPEDIREQYVEPMLNLRRHKGL TEVVAREQLEDNMVLATMMLAEDEVDGIVSGAVNTTANTIRPPLQLIKTAPGSSLVSSIFFMLMPDQVLVYGDCAINPDP NAEQLADIAIQSAESAKAFGIEPRVAMISYSTGNSGTGSDVDKVREATRIAKEKRPDLVIDGPLQYDAAVMPNVARSKAP DSPVAGKATVFVFPDLNTGNTTYKAVQRSAELISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQATQQ
Sequences:
>Translated_712_residues MSRNIMLVPIGTGVGLTSLSLGMVRALERHGVKVQFFKPISQQRPADSGPERSTTILSKSPTVNPLEPFDMQHAESLIRT DQTDVLMEQIIARASEIAANTETLIIEGLVPTRSHSFSDDVNYAIAKALDADVIFIATPGNDTPNALMNRLEIAYNSWGG AKNKRLIGAVINKIGAPVDDEGRTRPDLSEVFDHQDIQKGDATAMFQLPGKSKLRILGSVPYNLDLVSPRASDLAKHLHA RILNAGEMNTRRLRKVTFCARSIPNMLSHFRTDSLLVTSGDRSDVIVAACLAAMNGVKIGALLLTGSYEPEPEVLKLCEQ AFETGLPVFMIDTNTWQTSLNIQRFNHEVPVDDAVRIELVQEYVASHIDQSWIESVTENSPREHRLSPPAFRYKLTELAR AAKKCIVLPEGDEPRTIKAASICAERGIARCVLLGKKDDILRIAAAQDVVLGEGVEILDPEDIREQYVEPMLNLRRHKGL TEVVAREQLEDNMVLATMMLAEDEVDGIVSGAVNTTANTIRPPLQLIKTAPGSSLVSSIFFMLMPDQVLVYGDCAINPDP NAEQLADIAIQSAESAKAFGIEPRVAMISYSTGNSGTGSDVDKVREATRIAKEKRPDLVIDGPLQYDAAVMPNVARSKAP DSPVAGKATVFVFPDLNTGNTTYKAVQRSAELISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQATQQ >Mature_711_residues SRNIMLVPIGTGVGLTSLSLGMVRALERHGVKVQFFKPISQQRPADSGPERSTTILSKSPTVNPLEPFDMQHAESLIRTD QTDVLMEQIIARASEIAANTETLIIEGLVPTRSHSFSDDVNYAIAKALDADVIFIATPGNDTPNALMNRLEIAYNSWGGA KNKRLIGAVINKIGAPVDDEGRTRPDLSEVFDHQDIQKGDATAMFQLPGKSKLRILGSVPYNLDLVSPRASDLAKHLHAR ILNAGEMNTRRLRKVTFCARSIPNMLSHFRTDSLLVTSGDRSDVIVAACLAAMNGVKIGALLLTGSYEPEPEVLKLCEQA FETGLPVFMIDTNTWQTSLNIQRFNHEVPVDDAVRIELVQEYVASHIDQSWIESVTENSPREHRLSPPAFRYKLTELARA AKKCIVLPEGDEPRTIKAASICAERGIARCVLLGKKDDILRIAAAQDVVLGEGVEILDPEDIREQYVEPMLNLRRHKGLT EVVAREQLEDNMVLATMMLAEDEVDGIVSGAVNTTANTIRPPLQLIKTAPGSSLVSSIFFMLMPDQVLVYGDCAINPDPN AEQLADIAIQSAESAKAFGIEPRVAMISYSTGNSGTGSDVDKVREATRIAKEKRPDLVIDGPLQYDAAVMPNVARSKAPD SPVAGKATVFVFPDLNTGNTTYKAVQRSAELISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQATQQ
Specific function: Conversion of acetate to acetyl-CoA; second step. [C]
COG id: COG0280
COG function: function code C; Phosphotransacetylase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788635, Length=713, Percent_Identity=67.3211781206171, Blast_Score=1005, Evalue=0.0, Organism=Escherichia coli, GI1788800, Length=320, Percent_Identity=38.125, Blast_Score=212, Evalue=7e-56, Organism=Escherichia coli, GI1788806, Length=347, Percent_Identity=29.971181556196, Blast_Score=155, Evalue=9e-39,
Paralogues:
None
Copy number: 1420 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 1250 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010766 - InterPro: IPR016475 - InterPro: IPR004614 - InterPro: IPR002505 [H]
Pfam domain/function: PF07085 DRTGG; PF01515 PTA_PTB [H]
EC number: =2.3.1.8 [H]
Molecular weight: Translated: 77584; Mature: 77453
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNIMLVPIGTGVGLTSLSLGMVRALERHGVKVQFFKPISQQRPADSGPERSTTILSKS CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCCCEEEEECC PTVNPLEPFDMQHAESLIRTDQTDVLMEQIIARASEIAANTETLIIEGLVPTRSHSFSDD CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC VNYAIAKALDADVIFIATPGNDTPNALMNRLEIAYNSWGGAKNKRLIGAVINKIGAPVDD HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC EGRTRPDLSEVFDHQDIQKGDATAMFQLPGKSKLRILGSVPYNLDLVSPRASDLAKHLHA CCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEECCCCHHHHHHHHHH RILNAGEMNTRRLRKVTFCARSIPNMLSHFRTDSLLVTSGDRSDVIVAACLAAMNGVKIG HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCEEE ALLLTGSYEPEPEVLKLCEQAFETGLPVFMIDTNTWQTSLNIQRFNHEVPVDDAVRIELV EEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEEHEECCCCCCCCCHHHHHHH QEYVASHIDQSWIESVTENSPREHRLSPPAFRYKLTELARAAKKCIVLPEGDEPRTIKAA HHHHHHHCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEHHH SICAERGIARCVLLGKKDDILRIAAAQDVVLGEGVEILDPEDIREQYVEPMLNLRRHKGL HHHHHCCCEEEEEECCCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCH TEVVAREQLEDNMVLATMMLAEDEVDGIVSGAVNTTANTIRPPLQLIKTAPGSSLVSSIF HHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH FMLMPDQVLVYGDCAINPDPNAEQLADIAIQSAESAKAFGIEPRVAMISYSTGNSGTGSD HHHCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHCCCCCCEEEEEEECCCCCCCCH VDKVREATRIAKEKRPDLVIDGPLQYDAAVMPNVARSKAPDSPVAGKATVFVFPDLNTGN HHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCHHHCCCCCCCCCCCEEEEEEECCCCCC TTYKAVQRSAELISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQATQQ HHHHHHHHHHHHEEHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRNIMLVPIGTGVGLTSLSLGMVRALERHGVKVQFFKPISQQRPADSGPERSTTILSKS CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCCCEEEEECC PTVNPLEPFDMQHAESLIRTDQTDVLMEQIIARASEIAANTETLIIEGLVPTRSHSFSDD CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC VNYAIAKALDADVIFIATPGNDTPNALMNRLEIAYNSWGGAKNKRLIGAVINKIGAPVDD HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC EGRTRPDLSEVFDHQDIQKGDATAMFQLPGKSKLRILGSVPYNLDLVSPRASDLAKHLHA CCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEECCCCHHHHHHHHHH RILNAGEMNTRRLRKVTFCARSIPNMLSHFRTDSLLVTSGDRSDVIVAACLAAMNGVKIG HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCEEE ALLLTGSYEPEPEVLKLCEQAFETGLPVFMIDTNTWQTSLNIQRFNHEVPVDDAVRIELV EEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEEHEECCCCCCCCCHHHHHHH QEYVASHIDQSWIESVTENSPREHRLSPPAFRYKLTELARAAKKCIVLPEGDEPRTIKAA HHHHHHHCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEHHH SICAERGIARCVLLGKKDDILRIAAAQDVVLGEGVEILDPEDIREQYVEPMLNLRRHKGL HHHHHCCCEEEEEECCCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCH TEVVAREQLEDNMVLATMMLAEDEVDGIVSGAVNTTANTIRPPLQLIKTAPGSSLVSSIF HHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH FMLMPDQVLVYGDCAINPDPNAEQLADIAIQSAESAKAFGIEPRVAMISYSTGNSGTGSD HHHCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHCCCCCCEEEEEEECCCCCCCCH VDKVREATRIAKEKRPDLVIDGPLQYDAAVMPNVARSKAPDSPVAGKATVFVFPDLNTGN HHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCHHHCCCCCCCCCCCEEEEEEECCCCCC TTYKAVQRSAELISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQATQQ HHHHHHHHHHHHEEHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7883769; 7918659; 9205837; 9278503; 2536666 [H]