Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774423

Identifier: 119774423

GI number: 119774423

Start: 1574398

End: 1574700

Strand: Reverse

Name: 119774423

Synonym: Sama_1286

Alternate gene names: NA

Gene position: 1574700-1574398 (Counterclockwise)

Preceding gene: 119774424

Following gene: 119774422

Centisome position: 36.57

GC content: 44.55

Gene sequence:

>303_bases
ATGGATGACAATCCAAAAGATTACGAAGAAAGACGCAGATCACTCAGGGTAGATTTAGAAGCAGAACGCGTGCTGGTCAG
CTGGGTTGATAAAGATGGTATTGAACGAAATGACGATGGTGTCTGTATTGACCTGTCGAGGCGTGGCTTACTGTTTGAAT
ATCGTCAGCCTTTCGCGTTGGGAGAACTGGTCGAAGTGACCTTTAATCCAGGCACAGACAAACAGAATACTGTTCAGGGG
CAGGTTTGCCGCTGTAAAGAGAGTAAAGCGCAGAGTTATCATATTGCTATGCAATTGATTTAA

Upstream 100 bases:

>100_bases
GGCTTTTTTTCATTCACCTTAATGGAGCATTGGTATTCTTAAGTAAAAGGAATTATGCTGATTTTTAAGCGCTTGTAATG
TGCCAGAGGAGAAGGCCGTG

Downstream 100 bases:

>100_bases
GCGATGCTTTTCTATCGTTTCCGACACACTGTTCTATACTGATGTGAAAAGATTGGCTTTTACGGAGCGTCCATTATGAT
TTTGCTGGTTGGTGGTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MDDNPKDYEERRRSLRVDLEAERVLVSWVDKDGIERNDDGVCIDLSRRGLLFEYRQPFALGELVEVTFNPGTDKQNTVQG
QVCRCKESKAQSYHIAMQLI

Sequences:

>Translated_100_residues
MDDNPKDYEERRRSLRVDLEAERVLVSWVDKDGIERNDDGVCIDLSRRGLLFEYRQPFALGELVEVTFNPGTDKQNTVQG
QVCRCKESKAQSYHIAMQLI
>Mature_100_residues
MDDNPKDYEERRRSLRVDLEAERVLVSWVDKDGIERNDDGVCIDLSRRGLLFEYRQPFALGELVEVTFNPGTDKQNTVQG
QVCRCKESKAQSYHIAMQLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11605; Mature: 11605

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDNPKDYEERRRSLRVDLEAERVLVSWVDKDGIERNDDGVCIDLSRRGLLFEYRQPFAL
CCCCCCCHHHHHHHEECCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCEEEECCCCCCC
GELVEVTFNPGTDKQNTVQGQVCRCKESKAQSYHIAMQLI
CEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEEEEEEEC
>Mature Secondary Structure
MDDNPKDYEERRRSLRVDLEAERVLVSWVDKDGIERNDDGVCIDLSRRGLLFEYRQPFAL
CCCCCCCHHHHHHHEECCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCEEEECCCCCCC
GELVEVTFNPGTDKQNTVQGQVCRCKESKAQSYHIAMQLI
CEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA