| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is srmB [H]
Identifier: 119774410
GI number: 119774410
Start: 1560665
End: 1562035
Strand: Reverse
Name: srmB [H]
Synonym: Sama_1273
Alternate gene names: 119774410
Gene position: 1562035-1560665 (Counterclockwise)
Preceding gene: 119774416
Following gene: 119774409
Centisome position: 36.27
GC content: 56.89
Gene sequence:
>1371_bases TTGCAATTTTCTGATTTTTCCCTCGATAAGCGCCTCATGCAAAGCCTGAAGCACATGGGCATAGAGACGCCTACCCCCAT CCAGAGTCAGGCCATTCCTGTTGCCCTCGCGGGCAAAGATTTGATGGCCTCGTCCAAGACGGGATCGGGAAAGACGCTGG CATTTTTGCTGCCTGCCATGCAAAGGGTGATTTCCAGCAAGGCGCTGTCGAAAAAAGACCCTCGGGTGCTTATTTTGCTG CCCACACGAGAATTGGCTCAGCAGGTGTATGCCCAGCTTCGTCTGCTGGTGGCCAACACCCAATACCGGGCCATCAGCGT ACTGGGCGGTGAAAACTTTAACGATCAGGCCAAGGCCCTTGCAAGAGAGCCACATTTCATTGTGGCGACGCCCGGTCGCA TCGCCGACCATCTGCAGCAGAGGCACCTTTTTTTAAACGGGCTCGAACTGCTGGTACTCGACGAAGCCGATCGCATGCTG GATTTGGGCTTTGCACCTCAGCTGAAAGCCATCAACGCCGCCGCCGACCATCGCCGCAGACAAACCCTGATGTTCTCGGC CACCCTGGAACATGGCGAAGTGCACGAGTTGGCGGCAGAACTGCTCAAAGAGCCTGAACATGTTGCCATCGATGCCGTGC ACCTGGGCCACGGTGATATCGAGCAACAAATCCTGCTTGCCGACCATCTGGAACATAAAGAAGCCCTGCTTGAGCGCCTG CTCAGCGGCAATAACTTCCGTCAGGTGATGATTTTTACCGCCACCCGTCAGGACACAGAGCGCCTGGCCACCCTGCTGGC CGAAAAAGGCTACAACACGGCAGCCTTGTCCGGCGAGCTGCGCCAGGCACAGCGCAATCAAATCATGGACAGCTTCAGCC GTGAACATCACCGCATTCTGGTCACTACCGACGTAGCTTCCCGCGGTCTGGATATCTCCAACGTGTCCCTGGTGGTAAAT TTCGACATGCCGAAGTTTGCCGAGGAATACGTACATCGCATTGGCCGCACCGGCCGCGCAGGAAACAAGGGCACCGCCAT TTCGCTGGTGGGACCAAAAGACTGGGATAATTTCCTCAAGGTCCAGATCCTGCTGCAAAAGACTTTTGAGTTCAGCGTGC TTGAAGGTCTGGAAGCCAAGTTCAAGGGGCTGGCGCCCAAGCGTGAACGCAAAGACGCCGGTGCCAAGGCAAAAGCTGCG GGCAAGACCAAACGGCAAACCGCAGATGCACCCAAGGGTGAGAAACGCAGCCGTGACAAGCGCTTCCTCACCGGCGTGGA TGTGGGCGATGCGCCAATGATCCGTAAAAAGCCCCTCCCGGCACCGATTGTGCCCGAGGACGATGACGCTGATGAGCTGG GCGAAGACTGA
Upstream 100 bases:
>100_bases TAGGGAGCGCGCTGTAACGCGGGCGGACGCACACTTGTCATGGCGCCAAGCTGCCGATGGCGCTATAATTCCCGGCTTGA ATTTTTCCGGAGACCATCCT
Downstream 100 bases:
>100_bases GATACTCAGATCAAGGCGCACGTTTTCGCTCGAGCGAAAGCACCGAACCAATTAAGTGACAGAAAAGATAAGGGAAAAAA ATGAGAGTATGTGGCGTAGA
Product: DEAD/DEAH box helicase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MQFSDFSLDKRLMQSLKHMGIETPTPIQSQAIPVALAGKDLMASSKTGSGKTLAFLLPAMQRVISSKALSKKDPRVLILL PTRELAQQVYAQLRLLVANTQYRAISVLGGENFNDQAKALAREPHFIVATPGRIADHLQQRHLFLNGLELLVLDEADRML DLGFAPQLKAINAAADHRRRQTLMFSATLEHGEVHELAAELLKEPEHVAIDAVHLGHGDIEQQILLADHLEHKEALLERL LSGNNFRQVMIFTATRQDTERLATLLAEKGYNTAALSGELRQAQRNQIMDSFSREHHRILVTTDVASRGLDISNVSLVVN FDMPKFAEEYVHRIGRTGRAGNKGTAISLVGPKDWDNFLKVQILLQKTFEFSVLEGLEAKFKGLAPKRERKDAGAKAKAA GKTKRQTADAPKGEKRSRDKRFLTGVDVGDAPMIRKKPLPAPIVPEDDDADELGED
Sequences:
>Translated_456_residues MQFSDFSLDKRLMQSLKHMGIETPTPIQSQAIPVALAGKDLMASSKTGSGKTLAFLLPAMQRVISSKALSKKDPRVLILL PTRELAQQVYAQLRLLVANTQYRAISVLGGENFNDQAKALAREPHFIVATPGRIADHLQQRHLFLNGLELLVLDEADRML DLGFAPQLKAINAAADHRRRQTLMFSATLEHGEVHELAAELLKEPEHVAIDAVHLGHGDIEQQILLADHLEHKEALLERL LSGNNFRQVMIFTATRQDTERLATLLAEKGYNTAALSGELRQAQRNQIMDSFSREHHRILVTTDVASRGLDISNVSLVVN FDMPKFAEEYVHRIGRTGRAGNKGTAISLVGPKDWDNFLKVQILLQKTFEFSVLEGLEAKFKGLAPKRERKDAGAKAKAA GKTKRQTADAPKGEKRSRDKRFLTGVDVGDAPMIRKKPLPAPIVPEDDDADELGED >Mature_456_residues MQFSDFSLDKRLMQSLKHMGIETPTPIQSQAIPVALAGKDLMASSKTGSGKTLAFLLPAMQRVISSKALSKKDPRVLILL PTRELAQQVYAQLRLLVANTQYRAISVLGGENFNDQAKALAREPHFIVATPGRIADHLQQRHLFLNGLELLVLDEADRML DLGFAPQLKAINAAADHRRRQTLMFSATLEHGEVHELAAELLKEPEHVAIDAVHLGHGDIEQQILLADHLEHKEALLERL LSGNNFRQVMIFTATRQDTERLATLLAEKGYNTAALSGELRQAQRNQIMDSFSREHHRILVTTDVASRGLDISNVSLVVN FDMPKFAEEYVHRIGRTGRAGNKGTAISLVGPKDWDNFLKVQILLQKTFEFSVLEGLEAKFKGLAPKRERKDAGAKAKAA GKTKRQTADAPKGEKRSRDKRFLTGVDVGDAPMIRKKPLPAPIVPEDDDADELGED
Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI45446747, Length=360, Percent_Identity=38.6111111111111, Blast_Score=259, Evalue=2e-69, Organism=Homo sapiens, GI45446743, Length=360, Percent_Identity=38.6111111111111, Blast_Score=259, Evalue=2e-69, Organism=Homo sapiens, GI13518015, Length=358, Percent_Identity=38.5474860335196, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI262231852, Length=358, Percent_Identity=38.5474860335196, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI262118318, Length=358, Percent_Identity=38.5474860335196, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI216548263, Length=358, Percent_Identity=38.5474860335196, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI224593278, Length=354, Percent_Identity=40.9604519774011, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI169881239, Length=370, Percent_Identity=37.8378378378378, Blast_Score=242, Evalue=6e-64, Organism=Homo sapiens, GI13514809, Length=370, Percent_Identity=37.8378378378378, Blast_Score=242, Evalue=6e-64, Organism=Homo sapiens, GI301171475, Length=369, Percent_Identity=37.6693766937669, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI87196351, Length=369, Percent_Identity=37.6693766937669, Blast_Score=238, Evalue=6e-63, Organism=Homo sapiens, GI301171467, Length=369, Percent_Identity=37.6693766937669, Blast_Score=238, Evalue=7e-63, Organism=Homo sapiens, GI41327771, Length=390, Percent_Identity=36.4102564102564, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI222352149, Length=359, Percent_Identity=38.1615598885794, Blast_Score=234, Evalue=8e-62, Organism=Homo sapiens, GI20149629, Length=416, Percent_Identity=35.5769230769231, Blast_Score=232, Evalue=5e-61, Organism=Homo sapiens, GI41327773, Length=346, Percent_Identity=39.0173410404624, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI31542656, Length=388, Percent_Identity=36.8556701030928, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI148613856, Length=358, Percent_Identity=36.5921787709497, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI38201710, Length=358, Percent_Identity=36.5921787709497, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI4758138, Length=361, Percent_Identity=36.2880886426593, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI188035877, Length=369, Percent_Identity=37.3983739837398, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI13514831, Length=373, Percent_Identity=35.656836461126, Blast_Score=208, Evalue=8e-54, Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=35.4748603351955, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI164664518, Length=363, Percent_Identity=33.3333333333333, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI55749865, Length=350, Percent_Identity=35.1428571428571, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI38327634, Length=372, Percent_Identity=35.752688172043, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI7661920, Length=356, Percent_Identity=32.5842696629214, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI51094101, Length=375, Percent_Identity=35.7333333333333, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI164419743, Length=375, Percent_Identity=35.7333333333333, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI41327776, Length=414, Percent_Identity=32.3671497584541, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI13129006, Length=371, Percent_Identity=34.7708894878706, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI38569505, Length=359, Percent_Identity=33.4261838440111, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI38569503, Length=359, Percent_Identity=33.4261838440111, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI50659095, Length=379, Percent_Identity=32.9815303430079, Blast_Score=185, Evalue=7e-47, Organism=Homo sapiens, GI4503529, Length=356, Percent_Identity=34.2696629213483, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI83700235, Length=353, Percent_Identity=33.9943342776204, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI9506931, Length=425, Percent_Identity=32.2352941176471, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI21040371, Length=378, Percent_Identity=32.2751322751323, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI164419732, Length=357, Percent_Identity=33.3333333333333, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI256223453, Length=365, Percent_Identity=29.8630136986301, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI8922886, Length=377, Percent_Identity=32.6259946949602, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI6005743, Length=377, Percent_Identity=32.3607427055703, Blast_Score=168, Evalue=7e-42, Organism=Homo sapiens, GI4758112, Length=382, Percent_Identity=31.151832460733, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI18375623, Length=382, Percent_Identity=31.151832460733, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI17505907, Length=408, Percent_Identity=30.1470588235294, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI154759257, Length=416, Percent_Identity=30.7692307692308, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI62241022, Length=361, Percent_Identity=32.6869806094183, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI41327779, Length=373, Percent_Identity=31.0991957104558, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI256773275, Length=424, Percent_Identity=32.5471698113208, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI62241024, Length=339, Percent_Identity=32.1533923303835, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI9966805, Length=333, Percent_Identity=32.1321321321321, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=28.3582089552239, Blast_Score=129, Evalue=8e-30, Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=35.8139534883721, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI51242943, Length=361, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI51242947, Length=361, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI148612816, Length=363, Percent_Identity=26.7217630853994, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1788930, Length=377, Percent_Identity=40.053050397878, Blast_Score=249, Evalue=2e-67, Organism=Escherichia coli, GI1787016, Length=380, Percent_Identity=37.6315789473684, Blast_Score=243, Evalue=2e-65, Organism=Escherichia coli, GI87082221, Length=349, Percent_Identity=39.541547277937, Blast_Score=240, Evalue=1e-64, Organism=Escherichia coli, GI1787605, Length=395, Percent_Identity=38.9873417721519, Blast_Score=237, Evalue=1e-63, Organism=Escherichia coli, GI1790214, Length=352, Percent_Identity=37.2159090909091, Blast_Score=231, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=40.8963585434174, Blast_Score=249, Evalue=3e-66, Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=39.0243902439024, Blast_Score=241, Evalue=5e-64, Organism=Caenorhabditis elegans, GI17510307, Length=368, Percent_Identity=36.9565217391304, Blast_Score=238, Evalue=3e-63, Organism=Caenorhabditis elegans, GI17510309, Length=368, Percent_Identity=36.9565217391304, Blast_Score=238, Evalue=3e-63, Organism=Caenorhabditis elegans, GI71995514, Length=368, Percent_Identity=36.9565217391304, Blast_Score=238, Evalue=4e-63, Organism=Caenorhabditis elegans, GI17555296, Length=434, Percent_Identity=34.331797235023, Blast_Score=234, Evalue=6e-62, Organism=Caenorhabditis elegans, GI17510559, Length=379, Percent_Identity=36.1477572559367, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI32565321, Length=373, Percent_Identity=35.656836461126, Blast_Score=224, Evalue=6e-59, Organism=Caenorhabditis elegans, GI115533224, Length=341, Percent_Identity=37.2434017595308, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI86570094, Length=360, Percent_Identity=36.6666666666667, Blast_Score=211, Evalue=9e-55, Organism=Caenorhabditis elegans, GI71987143, Length=354, Percent_Identity=33.6158192090396, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17507945, Length=424, Percent_Identity=34.4339622641509, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=34.6883468834688, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71995724, Length=356, Percent_Identity=33.7078651685393, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17507121, Length=356, Percent_Identity=33.4269662921348, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17507881, Length=385, Percent_Identity=34.025974025974, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17537549, Length=381, Percent_Identity=35.4330708661417, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI17507879, Length=369, Percent_Identity=34.6883468834688, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI115532546, Length=370, Percent_Identity=34.0540540540541, Blast_Score=198, Evalue=5e-51, Organism=Caenorhabditis elegans, GI115532548, Length=386, Percent_Identity=33.160621761658, Blast_Score=197, Evalue=9e-51, Organism=Caenorhabditis elegans, GI71999646, Length=379, Percent_Identity=32.9815303430079, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI71999644, Length=379, Percent_Identity=32.9815303430079, Blast_Score=191, Evalue=9e-49, Organism=Caenorhabditis elegans, GI17552114, Length=357, Percent_Identity=33.0532212885154, Blast_Score=188, Evalue=4e-48, Organism=Caenorhabditis elegans, GI17509811, Length=359, Percent_Identity=31.4763231197772, Blast_Score=187, Evalue=8e-48, Organism=Caenorhabditis elegans, GI17508543, Length=368, Percent_Identity=32.0652173913043, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17505370, Length=400, Percent_Identity=32.75, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI71990816, Length=366, Percent_Identity=32.2404371584699, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17507641, Length=411, Percent_Identity=30.9002433090024, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI32564046, Length=380, Percent_Identity=32.1052631578947, Blast_Score=167, Evalue=9e-42, Organism=Caenorhabditis elegans, GI71982858, Length=378, Percent_Identity=30.952380952381, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI193206561, Length=354, Percent_Identity=30.225988700565, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI25148203, Length=438, Percent_Identity=27.3972602739726, Blast_Score=155, Evalue=6e-38, Organism=Caenorhabditis elegans, GI193208216, Length=397, Percent_Identity=32.4937027707809, Blast_Score=154, Evalue=6e-38, Organism=Caenorhabditis elegans, GI17536099, Length=397, Percent_Identity=28.463476070529, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17536101, Length=397, Percent_Identity=28.463476070529, Blast_Score=141, Evalue=7e-34, Organism=Caenorhabditis elegans, GI17536103, Length=385, Percent_Identity=28.8311688311688, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI71997889, Length=411, Percent_Identity=29.9270072992701, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17556951, Length=331, Percent_Identity=29.0030211480363, Blast_Score=134, Evalue=8e-32, Organism=Caenorhabditis elegans, GI17553716, Length=355, Percent_Identity=28.4507042253521, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI25148291, Length=334, Percent_Identity=26.3473053892216, Blast_Score=121, Evalue=6e-28, Organism=Caenorhabditis elegans, GI17557982, Length=390, Percent_Identity=24.8717948717949, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=44.9438202247191, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI71982862, Length=190, Percent_Identity=29.4736842105263, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6325138, Length=363, Percent_Identity=39.6694214876033, Blast_Score=246, Evalue=6e-66, Organism=Saccharomyces cerevisiae, GI6321856, Length=367, Percent_Identity=39.5095367847411, Blast_Score=243, Evalue=4e-65, Organism=Saccharomyces cerevisiae, GI6324217, Length=353, Percent_Identity=38.2436260623229, Blast_Score=238, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6324778, Length=362, Percent_Identity=36.1878453038674, Blast_Score=231, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6321360, Length=355, Percent_Identity=40, Blast_Score=230, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=363, Percent_Identity=36.9146005509642, Blast_Score=226, Evalue=5e-60, Organism=Saccharomyces cerevisiae, GI6320224, Length=355, Percent_Identity=32.3943661971831, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6320041, Length=366, Percent_Identity=33.879781420765, Blast_Score=205, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320449, Length=357, Percent_Identity=36.6946778711485, Blast_Score=202, Evalue=7e-53, Organism=Saccharomyces cerevisiae, GI6321963, Length=373, Percent_Identity=38.0697050938338, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6323947, Length=355, Percent_Identity=34.3661971830986, Blast_Score=197, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6320173, Length=420, Percent_Identity=31.9047619047619, Blast_Score=196, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6322912, Length=353, Percent_Identity=34.5609065155807, Blast_Score=191, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6322323, Length=353, Percent_Identity=34.5609065155807, Blast_Score=191, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6322427, Length=368, Percent_Identity=33.4239130434783, Blast_Score=189, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6319714, Length=359, Percent_Identity=32.5905292479109, Blast_Score=183, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6323306, Length=415, Percent_Identity=31.0843373493976, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6320400, Length=373, Percent_Identity=30.8310991957105, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6321267, Length=425, Percent_Identity=31.0588235294118, Blast_Score=172, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6320119, Length=373, Percent_Identity=31.3672922252011, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6321111, Length=424, Percent_Identity=28.3018867924528, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6324620, Length=378, Percent_Identity=30.6878306878307, Blast_Score=162, Evalue=7e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=409, Percent_Identity=27.8728606356968, Blast_Score=152, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6324366, Length=409, Percent_Identity=28.6063569682152, Blast_Score=129, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6322876, Length=181, Percent_Identity=35.9116022099448, Blast_Score=104, Evalue=2e-23, Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=39.8876404494382, Blast_Score=250, Evalue=1e-66, Organism=Drosophila melanogaster, GI24584399, Length=354, Percent_Identity=38.135593220339, Blast_Score=248, Evalue=6e-66, Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=38.8101983002833, Blast_Score=244, Evalue=7e-65, Organism=Drosophila melanogaster, GI21356161, Length=356, Percent_Identity=38.7640449438202, Blast_Score=241, Evalue=8e-64, Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=36.986301369863, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=36.6946778711485, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24585582, Length=382, Percent_Identity=36.6492146596859, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI17985987, Length=372, Percent_Identity=37.3655913978495, Blast_Score=231, Evalue=6e-61, Organism=Drosophila melanogaster, GI21355075, Length=385, Percent_Identity=37.1428571428571, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI24584994, Length=381, Percent_Identity=36.2204724409449, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI24644479, Length=354, Percent_Identity=37.0056497175141, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24644483, Length=354, Percent_Identity=37.0056497175141, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI281361218, Length=354, Percent_Identity=37.0056497175141, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI24644481, Length=354, Percent_Identity=37.0056497175141, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI24644487, Length=354, Percent_Identity=37.0056497175141, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI45551833, Length=354, Percent_Identity=37.0056497175141, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI24644485, Length=354, Percent_Identity=37.0056497175141, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=35.195530726257, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI17136814, Length=361, Percent_Identity=36.01108033241, Blast_Score=204, Evalue=9e-53, Organism=Drosophila melanogaster, GI28575014, Length=377, Percent_Identity=35.0132625994695, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI24645031, Length=356, Percent_Identity=32.3033707865169, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24583281, Length=359, Percent_Identity=33.1476323119777, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI24583279, Length=365, Percent_Identity=33.1506849315069, Blast_Score=198, Evalue=8e-51, Organism=Drosophila melanogaster, GI28571808, Length=366, Percent_Identity=34.4262295081967, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI28571809, Length=366, Percent_Identity=34.4262295081967, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=36.624203821656, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=31.7333333333333, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24666101, Length=370, Percent_Identity=32.972972972973, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI24582080, Length=355, Percent_Identity=32.3943661971831, Blast_Score=172, Evalue=5e-43, Organism=Drosophila melanogaster, GI24582078, Length=355, Percent_Identity=32.3943661971831, Blast_Score=172, Evalue=5e-43, Organism=Drosophila melanogaster, GI17136248, Length=355, Percent_Identity=32.3943661971831, Blast_Score=172, Evalue=5e-43, Organism=Drosophila melanogaster, GI24582075, Length=355, Percent_Identity=32.3943661971831, Blast_Score=172, Evalue=5e-43, Organism=Drosophila melanogaster, GI21355559, Length=384, Percent_Identity=33.8541666666667, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI24581954, Length=357, Percent_Identity=31.9327731092437, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI24581952, Length=357, Percent_Identity=31.9327731092437, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI24581956, Length=357, Percent_Identity=31.9327731092437, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI17647335, Length=362, Percent_Identity=31.767955801105, Blast_Score=158, Evalue=7e-39, Organism=Drosophila melanogaster, GI20130173, Length=464, Percent_Identity=28.0172413793103, Blast_Score=153, Evalue=3e-37, Organism=Drosophila melanogaster, GI24643725, Length=394, Percent_Identity=29.9492385786802, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI17136666, Length=426, Percent_Identity=28.6384976525822, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=29.7546012269939, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI19920478, Length=373, Percent_Identity=28.4182305630027, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24640164, Length=352, Percent_Identity=27.5568181818182, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI18859659, Length=210, Percent_Identity=36.1904761904762, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI28571338, Length=210, Percent_Identity=36.1904761904762, Blast_Score=113, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50560; Mature: 50560
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFSDFSLDKRLMQSLKHMGIETPTPIQSQAIPVALAGKDLMASSKTGSGKTLAFLLPAM CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCHHHHHHHHH QRVISSKALSKKDPRVLILLPTRELAQQVYAQLRLLVANTQYRAISVLGGENFNDQAKAL HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH AREPHFIVATPGRIADHLQQRHLFLNGLELLVLDEADRMLDLGFAPQLKAINAAADHRRR HCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHH QTLMFSATLEHGEVHELAAELLKEPEHVAIDAVHLGHGDIEQQILLADHLEHKEALLERL HEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH LSGNNFRQVMIFTATRQDTERLATLLAEKGYNTAALSGELRQAQRNQIMDSFSREHHRIL HCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE VTTDVASRGLDISNVSLVVNFDMPKFAEEYVHRIGRTGRAGNKGTAISLVGPKDWDNFLK EEECHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHH VQILLQKTFEFSVLEGLEAKFKGLAPKRERKDAGAKAKAAGKTKRQTADAPKGEKRSRDK HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHCCCHHHHCCCCCCCCHHCCCC RFLTGVDVGDAPMIRKKPLPAPIVPEDDDADELGED CEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC >Mature Secondary Structure MQFSDFSLDKRLMQSLKHMGIETPTPIQSQAIPVALAGKDLMASSKTGSGKTLAFLLPAM CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCHHHHHHHHH QRVISSKALSKKDPRVLILLPTRELAQQVYAQLRLLVANTQYRAISVLGGENFNDQAKAL HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH AREPHFIVATPGRIADHLQQRHLFLNGLELLVLDEADRMLDLGFAPQLKAINAAADHRRR HCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHH QTLMFSATLEHGEVHELAAELLKEPEHVAIDAVHLGHGDIEQQILLADHLEHKEALLERL HEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH LSGNNFRQVMIFTATRQDTERLATLLAEKGYNTAALSGELRQAQRNQIMDSFSREHHRIL HCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE VTTDVASRGLDISNVSLVVNFDMPKFAEEYVHRIGRTGRAGNKGTAISLVGPKDWDNFLK EEECHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHH VQILLQKTFEFSVLEGLEAKFKGLAPKRERKDAGAKAKAAGKTKRQTADAPKGEKRSRDK HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHCCCHHHHCCCCCCCCHHCCCC RFLTGVDVGDAPMIRKKPLPAPIVPEDDDADELGED CEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]