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The map label for this gene is ycjF [C]

Identifier: 119774378

GI number: 119774378

Start: 1525073

End: 1526161

Strand: Direct

Name: ycjF [C]

Synonym: Sama_1241

Alternate gene names: 119774378

Gene position: 1525073-1526161 (Clockwise)

Preceding gene: 119774377

Following gene: 119774379

Centisome position: 35.42

GC content: 56.66

Gene sequence:

>1089_bases
ATGACTGAAATCATGAAAGACGAGACGCCGCTGGCGCCCGCACGCCGCTTTGAATCTGAGCGGCCAACCGACGATGCCCT
CGCAGGCACTCAGCGTTTTGCCGTTGAGACCGAGGTGCGCAGCCTTGATGAAACTGAGCTTGAACAGGCACTGTCCCCCC
TCGATGCCCACATCACTTTGCAGGGACTGAAAGGCCGCCGCTGGTCGCCCCTGGCGAAGTGGGCACTCACAGGCCTGGGT
GTGCTTGTAGTCACTGAAACCGCTCTGGGCTTAATGGACGCTTATCGCCAAAGCCCTTGGTTGTTTGGGCTTTATGGCGT
GGTGCTTGGGCTGGTGCTGACCTGGGGGCTTGGGGCGGCCTGGCGCGAGTACCTTCTGCTTAAACGTCTTAAAGCCACCG
ATGATGCCAGAGAGCAGGGCGCCAGAATTCGTGAGAGCGTACAAATCGGCGAGGCCGATGCCTTTATCAATAGCCTCAGC
AGCAAGGCGCCAGCTGATGCACTCAGTAAATTCAAGACGTTGGTGCGTGATGAGCATAATGATGCGGAAAAGCTGACCCT
GTACGAGGAGTGTGTACTCACAGCGCAGGATGAAGCCGCCAAACGCAAAGTCAGTCGCTATGCGATGGAGTCGGCAGCGT
TGCTGGCGGCAAGCCCGTTGGCGGTGCTCGATATGGGGATCATTCTGTGGCGGAACCAGAAAATGATCCGGGATGTGGCG
GACTGTTATGGTGTCGAACTTGGCTACTGGAGTCGCATCCGGCTTATCCGCGCCATTTTGGTCAATATCTTCTATGCCGG
CACCACAGAGCTTGTGACCGACCTTGGCAGTCAACTGCTGTCGGTGGAGATGACAGGTAAGCTGTCTGCCCGCCTTGCCC
AGGGCCTTGGAGGCGGGCTGCTCACTGCCCGGCTTGGCTACCAGGCCATGGCGCTTTGCCGGCCGTTGACCTTCAAAACG
GAGCAGAAACCCAAGCTTTCACGTATCCATCAGCAACTGCTTGTTGAACTTAAGTCTTTGTTTAGTAGCGCTCTAAATGG
CCAGGTGGATAGCCGTCTGCGTCGTAACAAAGATTTTACAAATGGCTGA

Upstream 100 bases:

>100_bases
AAATGGCGAAAGCCCCATGTCCCATATCCGCCTCGATCATCTGCTGGAATACCTGCTTGGCGATAAGCTTGCCTGAGTGG
GAACCAGTGAGTAGCAGGAG

Downstream 100 bases:

>100_bases
CGCTTAATTCTGCTGCGGCCCTTGGCGTTTGCGCCCGGGGCAGTCATGTTAGTGCCCACACCACCGCCACAACCTATAAT
TTCTTAAGGTGGTGCTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MTEIMKDETPLAPARRFESERPTDDALAGTQRFAVETEVRSLDETELEQALSPLDAHITLQGLKGRRWSPLAKWALTGLG
VLVVTETALGLMDAYRQSPWLFGLYGVVLGLVLTWGLGAAWREYLLLKRLKATDDAREQGARIRESVQIGEADAFINSLS
SKAPADALSKFKTLVRDEHNDAEKLTLYEECVLTAQDEAAKRKVSRYAMESAALLAASPLAVLDMGIILWRNQKMIRDVA
DCYGVELGYWSRIRLIRAILVNIFYAGTTELVTDLGSQLLSVEMTGKLSARLAQGLGGGLLTARLGYQAMALCRPLTFKT
EQKPKLSRIHQQLLVELKSLFSSALNGQVDSRLRRNKDFTNG

Sequences:

>Translated_362_residues
MTEIMKDETPLAPARRFESERPTDDALAGTQRFAVETEVRSLDETELEQALSPLDAHITLQGLKGRRWSPLAKWALTGLG
VLVVTETALGLMDAYRQSPWLFGLYGVVLGLVLTWGLGAAWREYLLLKRLKATDDAREQGARIRESVQIGEADAFINSLS
SKAPADALSKFKTLVRDEHNDAEKLTLYEECVLTAQDEAAKRKVSRYAMESAALLAASPLAVLDMGIILWRNQKMIRDVA
DCYGVELGYWSRIRLIRAILVNIFYAGTTELVTDLGSQLLSVEMTGKLSARLAQGLGGGLLTARLGYQAMALCRPLTFKT
EQKPKLSRIHQQLLVELKSLFSSALNGQVDSRLRRNKDFTNG
>Mature_361_residues
TEIMKDETPLAPARRFESERPTDDALAGTQRFAVETEVRSLDETELEQALSPLDAHITLQGLKGRRWSPLAKWALTGLGV
LVVTETALGLMDAYRQSPWLFGLYGVVLGLVLTWGLGAAWREYLLLKRLKATDDAREQGARIRESVQIGEADAFINSLSS
KAPADALSKFKTLVRDEHNDAEKLTLYEECVLTAQDEAAKRKVSRYAMESAALLAASPLAVLDMGIILWRNQKMIRDVAD
CYGVELGYWSRIRLIRAILVNIFYAGTTELVTDLGSQLLSVEMTGKLSARLAQGLGGGLLTARLGYQAMALCRPLTFKTE
QKPKLSRIHQQLLVELKSLFSSALNGQVDSRLRRNKDFTNG

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family [H]

Homologues:

Organism=Escherichia coli, GI1787582, Length=341, Percent_Identity=35.4838709677419, Blast_Score=178, Evalue=5e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021147
- InterPro:   IPR006507 [H]

Pfam domain/function: PF05128 DUF697 [H]

EC number: NA

Molecular weight: Translated: 40144; Mature: 40013

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIMKDETPLAPARRFESERPTDDALAGTQRFAVETEVRSLDETELEQALSPLDAHITL
CCCCCCCCCCCCHHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEE
QGLKGRRWSPLAKWALTGLGVLVVTETALGLMDAYRQSPWLFGLYGVVLGLVLTWGLGAA
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH
WREYLLLKRLKATDDAREQGARIRESVQIGEADAFINSLSSKAPADALSKFKTLVRDEHN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
DAEKLTLYEECVLTAQDEAAKRKVSRYAMESAALLAASPLAVLDMGIILWRNQKMIRDVA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHH
DCYGVELGYWSRIRLIRAILVNIFYAGTTELVTDLGSQLLSVEMTGKLSARLAQGLGGGL
HHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCHH
LTARLGYQAMALCRPLTFKTEQKPKLSRIHQQLLVELKSLFSSALNGQVDSRLRRNKDFT
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
NG
CC
>Mature Secondary Structure 
TEIMKDETPLAPARRFESERPTDDALAGTQRFAVETEVRSLDETELEQALSPLDAHITL
CCCCCCCCCCCHHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEE
QGLKGRRWSPLAKWALTGLGVLVVTETALGLMDAYRQSPWLFGLYGVVLGLVLTWGLGAA
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH
WREYLLLKRLKATDDAREQGARIRESVQIGEADAFINSLSSKAPADALSKFKTLVRDEHN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
DAEKLTLYEECVLTAQDEAAKRKVSRYAMESAALLAASPLAVLDMGIILWRNQKMIRDVA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHH
DCYGVELGYWSRIRLIRAILVNIFYAGTTELVTDLGSQLLSVEMTGKLSARLAQGLGGGL
HHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCHH
LTARLGYQAMALCRPLTFKTEQKPKLSRIHQQLLVELKSLFSSALNGQVDSRLRRNKDFT
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
NG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]