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The map label for this gene is 119774340

Identifier: 119774340

GI number: 119774340

Start: 1476060

End: 1476653

Strand: Reverse

Name: 119774340

Synonym: Sama_1203

Alternate gene names: NA

Gene position: 1476653-1476060 (Counterclockwise)

Preceding gene: 119774341

Following gene: 119774339

Centisome position: 34.29

GC content: 58.25

Gene sequence:

>594_bases
ATGCAAACATTGGCCGCGTTGCTGCAAGAGGTGCGGGGTTGCCAATTATGTGCGGGCCTGCCGCTTGGGCCCAAACCGAT
ATTGCAGGCAGAAAGCGACGCCAAAATCCTCATTGCCGGTCAGGCACCTGGTGCCAACACCCACGAAAAAGGCCGACCTT
TCGATGATGCCAGCGGTGACAGGCTTCGCCATTGGCTGGGGGTAGATAAGGCCTGCTTCTACGATCCCGGGCGTTTTGCC
ATACTGCCGATGGGGTTTTGCTTCCCCGGTGCCATCATCCGGCATGGAAGGCGTCAGGGGGATAAGCCACCCAGGCCCGA
ATGCGCACCGGCCTGGCGCAAGCAGCTTTTGTCTCATCTTCCGAATGTTGAGCTTACCCTGCTGCTGGGCACCTATGCGC
TTGACTGGCATTTGCCTGAACATAGGGGCCTTACGCTCGAAGCGACCGATTGGCAAACTCACTGGCCCAAGCTTCTGGTT
CTGCCCCACCCCAGCCCCCGCAACGGGCTTTGGCTTAAACGCCATCCTGAATTCGAAGCCAACGTCATCCCTAAGTTGCA
ACAACGTGTATCAGGCCTGCTCGGGCTGAACTAA

Upstream 100 bases:

>100_bases
CTAAGCAAACCCCTGTCGGTAAGTATTTGTGCGTGCTGGTGCTCTGCCTTGGGTATCCGCTGCTGGGCTACTACCTGTAC
CAGTTGGCAGGCAAGCTCTG

Downstream 100 bases:

>100_bases
ACTTAATACTTGGAACAGACACACGGAGGTCACCGATGAGGGCCTACGGATATCACTCATTTCGTGACATACAGGTCAAC
GAAATTGACTGGCTGAGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MQTLAALLQEVRGCQLCAGLPLGPKPILQAESDAKILIAGQAPGANTHEKGRPFDDASGDRLRHWLGVDKACFYDPGRFA
ILPMGFCFPGAIIRHGRRQGDKPPRPECAPAWRKQLLSHLPNVELTLLLGTYALDWHLPEHRGLTLEATDWQTHWPKLLV
LPHPSPRNGLWLKRHPEFEANVIPKLQQRVSGLLGLN

Sequences:

>Translated_197_residues
MQTLAALLQEVRGCQLCAGLPLGPKPILQAESDAKILIAGQAPGANTHEKGRPFDDASGDRLRHWLGVDKACFYDPGRFA
ILPMGFCFPGAIIRHGRRQGDKPPRPECAPAWRKQLLSHLPNVELTLLLGTYALDWHLPEHRGLTLEATDWQTHWPKLLV
LPHPSPRNGLWLKRHPEFEANVIPKLQQRVSGLLGLN
>Mature_197_residues
MQTLAALLQEVRGCQLCAGLPLGPKPILQAESDAKILIAGQAPGANTHEKGRPFDDASGDRLRHWLGVDKACFYDPGRFA
ILPMGFCFPGAIIRHGRRQGDKPPRPECAPAWRKQLLSHLPNVELTLLLGTYALDWHLPEHRGLTLEATDWQTHWPKLLV
LPHPSPRNGLWLKRHPEFEANVIPKLQQRVSGLLGLN

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 21963; Mature: 21963

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLAALLQEVRGCQLCAGLPLGPKPILQAESDAKILIAGQAPGANTHEKGRPFDDASGD
CHHHHHHHHHHCCCEEECCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHH
RLRHWLGVDKACFYDPGRFAILPMGFCFPGAIIRHGRRQGDKPPRPECAPAWRKQLLSHL
HHHHHHCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
PNVELTLLLGTYALDWHLPEHRGLTLEATDWQTHWPKLLVLPHPSPRNGLWLKRHPEFEA
CCCEEEEEEEEEEEEEECCCCCCCEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCCC
NVIPKLQQRVSGLLGLN
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTLAALLQEVRGCQLCAGLPLGPKPILQAESDAKILIAGQAPGANTHEKGRPFDDASGD
CHHHHHHHHHHCCCEEECCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHH
RLRHWLGVDKACFYDPGRFAILPMGFCFPGAIIRHGRRQGDKPPRPECAPAWRKQLLSHL
HHHHHHCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
PNVELTLLLGTYALDWHLPEHRGLTLEATDWQTHWPKLLVLPHPSPRNGLWLKRHPEFEA
CCCEEEEEEEEEEEEEECCCCCCCEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCCC
NVIPKLQQRVSGLLGLN
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]