Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774231

Identifier: 119774231

GI number: 119774231

Start: 1320269

End: 1321003

Strand: Direct

Name: 119774231

Synonym: Sama_1094

Alternate gene names: NA

Gene position: 1320269-1321003 (Clockwise)

Preceding gene: 119774230

Following gene: 119774233

Centisome position: 30.66

GC content: 54.29

Gene sequence:

>735_bases
ATGGTCAGGCGCTTTCTCTTTGCGACATTGTCCTTATGTGCTTTCGTTGCCTCGGCAGGGCAGCTGCGAGCCTGTATCGA
TGAGTTTCCCCCTTATCAAAGCCTGATGCCTGAACCCCATGGGAATAACATTGCCGCATTGAGGCTGTTTGCCAAACTGA
TAGACCATGATCCTGTGTTCTTGCCCAGCCCGAACTTTGCCCGCTGTCAGCGCATGCTGGACATGGGGGATGCCGATATT
GTTGCGGGTGTCATTGCCAGTCCGGAGCGGCAGCAGCGATGGATACTTTTGCCCTACCGCCGGGATAGCCGTTACCTTTT
TCTGACCAGGCCCGGCGGCGTCACCGTGAGCCGCTATGATAATTTACTGGGGCACAGTATCGCTGTAAGTCGTAACACCA
TGTATTTTGATTACTTTGATAATGACAGTCGTTTGAAAAAACAGGTGGTCGGTGACCTGGTCACGGGGGTGAGAATGTTG
CTGGCAGACAGGGTTGATGTGGTGATAGCCCCGGAAAATGCCCTGCCGTTCCTGAGCCGTGAGTTCTCAAACTTTGCCCA
TGCAGTGCAGGTATCAGAGTACCGATATCAGGAGGACCGGGTTATCCAGTTTGCTTTAAGCCGACAACACCGCCTGGATA
TCGATGAGCAAAGGCTGCGGCGGGTGATTACCGAGGCCTTTGAGCAATCCTTGTTTGAGTCGGCGCTGCAGGCCATGCCC
GCCAGCGCCCAGTAG

Upstream 100 bases:

>100_bases
GCCCACTGAGCTATATCCTTCAAGCTTTTAGCCTGACATGACTTGGGCAGCGCCCTAAAATACGTAATACTTTCGAATAG
TGTATTCAGTCGGAGCTGCC

Downstream 100 bases:

>100_bases
CTTGATGTCAGTTCGCCTTGTGGTGGGCTCTAAATAAATCCCAGGCGTTTTTTTGGGTACCATCGGCAAGCTCACACAAT
CCTGTATCACCCTCCGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MVRRFLFATLSLCAFVASAGQLRACIDEFPPYQSLMPEPHGNNIAALRLFAKLIDHDPVFLPSPNFARCQRMLDMGDADI
VAGVIASPERQQRWILLPYRRDSRYLFLTRPGGVTVSRYDNLLGHSIAVSRNTMYFDYFDNDSRLKKQVVGDLVTGVRML
LADRVDVVIAPENALPFLSREFSNFAHAVQVSEYRYQEDRVIQFALSRQHRLDIDEQRLRRVITEAFEQSLFESALQAMP
ASAQ

Sequences:

>Translated_244_residues
MVRRFLFATLSLCAFVASAGQLRACIDEFPPYQSLMPEPHGNNIAALRLFAKLIDHDPVFLPSPNFARCQRMLDMGDADI
VAGVIASPERQQRWILLPYRRDSRYLFLTRPGGVTVSRYDNLLGHSIAVSRNTMYFDYFDNDSRLKKQVVGDLVTGVRML
LADRVDVVIAPENALPFLSREFSNFAHAVQVSEYRYQEDRVIQFALSRQHRLDIDEQRLRRVITEAFEQSLFESALQAMP
ASAQ
>Mature_244_residues
MVRRFLFATLSLCAFVASAGQLRACIDEFPPYQSLMPEPHGNNIAALRLFAKLIDHDPVFLPSPNFARCQRMLDMGDADI
VAGVIASPERQQRWILLPYRRDSRYLFLTRPGGVTVSRYDNLLGHSIAVSRNTMYFDYFDNDSRLKKQVVGDLVTGVRML
LADRVDVVIAPENALPFLSREFSNFAHAVQVSEYRYQEDRVIQFALSRQHRLDIDEQRLRRVITEAFEQSLFESALQAMP
ASAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27903; Mature: 27903

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRFLFATLSLCAFVASAGQLRACIDEFPPYQSLMPEPHGNNIAALRLFAKLIDHDPVF
CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCEE
LPSPNFARCQRMLDMGDADIVAGVIASPERQQRWILLPYRRDSRYLFLTRPGGVTVSRYD
CCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCEEHHHHH
NLLGHSIAVSRNTMYFDYFDNDSRLKKQVVGDLVTGVRMLLADRVDVVIAPENALPFLSR
HHHHCEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH
EFSNFAHAVQVSEYRYQEDRVIQFALSRQHRLDIDEQRLRRVITEAFEQSLFESALQAMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ASAQ
CCCC
>Mature Secondary Structure
MVRRFLFATLSLCAFVASAGQLRACIDEFPPYQSLMPEPHGNNIAALRLFAKLIDHDPVF
CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCEE
LPSPNFARCQRMLDMGDADIVAGVIASPERQQRWILLPYRRDSRYLFLTRPGGVTVSRYD
CCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCEEHHHHH
NLLGHSIAVSRNTMYFDYFDNDSRLKKQVVGDLVTGVRMLLADRVDVVIAPENALPFLSR
HHHHCEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH
EFSNFAHAVQVSEYRYQEDRVIQFALSRQHRLDIDEQRLRRVITEAFEQSLFESALQAMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ASAQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA