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The map label for this gene is 119774202

Identifier: 119774202

GI number: 119774202

Start: 1289796

End: 1290938

Strand: Reverse

Name: 119774202

Synonym: Sama_1065

Alternate gene names: NA

Gene position: 1290938-1289796 (Counterclockwise)

Preceding gene: 119774203

Following gene: 119774201

Centisome position: 29.98

GC content: 55.56

Gene sequence:

>1143_bases
ATGACATCAGCCAAACTCAGCCACGCCCTTATTACACTGGCACTCATGCCCTTTGTGGCGACCGCTTACACCAAAGAAGA
AAATCAGGCGGTGCTCGATATGATTAAGCTGCCTGCCGGTTTTGAGATTGAGGTGCTGCACCATGGCTTTAAAAACTATC
GCCAGATGGCCGTGACTGAGTCGGGCCTTTTGTATGTGGGCTCCCGCAAAGAAGGTAAGGTGCACTATCTGCCTCTGCCC
GGCTCTGAGGCTGAAAAAGCCGGTGTGCGCGCCGGGCAGCTCTCCATGAAATTCACCATGCCTTCGGGCATTGCGTACCG
GGATGGCAAACTCTATATCGCCGATGTGGGTAACCTGTACCGTGTGGATGAGGCTCAAAGCCCGGGCAAGGCCTCACCAA
CCCTGATTTACGACAAATTGCCCAAGGATTTACACCACGGCTGGAAATACCTGAAATTCGCTGCGGATGGGCGCCTCTAC
ATCCCCATCGGCGCTCCCTGTAACATCTGTGATGCGGGCAAAGAGTACAGCAAAATCATCAGCCTGGATTTGGAAACCCT
AACCACCAGGGACGAAGCCCTCGGCGTACGTAACAGCGTCGGCTTCGACTTTGCCCCCACCACCGGCGAGCTTTGGTTTA
CCGACAATGGCCGCGATATGATGGGGGACGATATGCCCTCCGATGAGTTGAATCTGCTCAAAACCCCGGGCCAACACTTC
GGTTACCCCTATGTGCATCAGGGCGACACCCTGGATCCGGAATTCGGCACCGGCCACAGCATCCAGGACTATCAAGCGCC
AAAGGCCAAACTCGGCGCCCATGTGGCCAGTCTCGGCATGACCTTCTATACCGGAAAACAGTTTCCGCAAAAGTATCAGG
GTGGCATTTTTATCGCCGAGCATGGTTCCTGGAACCGCAGTGAAAAAGTCGGCTACCGGGTGCGCTTTGCCAAGCTTAAC
GGCAATGACGTGGAATACCTCGAAACCTTTGCCGAAGGCTGGTTACAGGGGGAAGAAGTCCATGGCCGCCCCGCCGATGT
GATGATGCTGCCAGACGGGAGCTTGCTGGTCAGCGACGATGGTCGCGACCGCATTTATCGTATCCGATATACAGGCCAGA
CGGGCGCTGATAAAGGTCGCTGA

Upstream 100 bases:

>100_bases
ACCAAACAGCGCCAATCGGCGCTGTTTTTTTAACTGCGCCTTTGGCATGCTTGTTGGCATTCGACGACACTATCCATGCT
CTTGATTGCAGGAGAACCCC

Downstream 100 bases:

>100_bases
AAAGGCAGCGAAACCACGCCCATCATGCTATCATTGCGCCCCATCTCGCCCTGGCAACGACTACCGAGGGGACTCCCCCG
CAGCCAGGGTGCAAAGTACC

Product: putative membrane-bound dehydrogenase oxidoreductase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MTSAKLSHALITLALMPFVATAYTKEENQAVLDMIKLPAGFEIEVLHHGFKNYRQMAVTESGLLYVGSRKEGKVHYLPLP
GSEAEKAGVRAGQLSMKFTMPSGIAYRDGKLYIADVGNLYRVDEAQSPGKASPTLIYDKLPKDLHHGWKYLKFAADGRLY
IPIGAPCNICDAGKEYSKIISLDLETLTTRDEALGVRNSVGFDFAPTTGELWFTDNGRDMMGDDMPSDELNLLKTPGQHF
GYPYVHQGDTLDPEFGTGHSIQDYQAPKAKLGAHVASLGMTFYTGKQFPQKYQGGIFIAEHGSWNRSEKVGYRVRFAKLN
GNDVEYLETFAEGWLQGEEVHGRPADVMMLPDGSLLVSDDGRDRIYRIRYTGQTGADKGR

Sequences:

>Translated_380_residues
MTSAKLSHALITLALMPFVATAYTKEENQAVLDMIKLPAGFEIEVLHHGFKNYRQMAVTESGLLYVGSRKEGKVHYLPLP
GSEAEKAGVRAGQLSMKFTMPSGIAYRDGKLYIADVGNLYRVDEAQSPGKASPTLIYDKLPKDLHHGWKYLKFAADGRLY
IPIGAPCNICDAGKEYSKIISLDLETLTTRDEALGVRNSVGFDFAPTTGELWFTDNGRDMMGDDMPSDELNLLKTPGQHF
GYPYVHQGDTLDPEFGTGHSIQDYQAPKAKLGAHVASLGMTFYTGKQFPQKYQGGIFIAEHGSWNRSEKVGYRVRFAKLN
GNDVEYLETFAEGWLQGEEVHGRPADVMMLPDGSLLVSDDGRDRIYRIRYTGQTGADKGR
>Mature_379_residues
TSAKLSHALITLALMPFVATAYTKEENQAVLDMIKLPAGFEIEVLHHGFKNYRQMAVTESGLLYVGSRKEGKVHYLPLPG
SEAEKAGVRAGQLSMKFTMPSGIAYRDGKLYIADVGNLYRVDEAQSPGKASPTLIYDKLPKDLHHGWKYLKFAADGRLYI
PIGAPCNICDAGKEYSKIISLDLETLTTRDEALGVRNSVGFDFAPTTGELWFTDNGRDMMGDDMPSDELNLLKTPGQHFG
YPYVHQGDTLDPEFGTGHSIQDYQAPKAKLGAHVASLGMTFYTGKQFPQKYQGGIFIAEHGSWNRSEKVGYRVRFAKLNG
NDVEYLETFAEGWLQGEEVHGRPADVMMLPDGSLLVSDDGRDRIYRIRYTGQTGADKGR

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 42107; Mature: 41976

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAKLSHALITLALMPFVATAYTKEENQAVLDMIKLPAGFEIEVLHHGFKNYRQMAVTE
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHEEEC
SGLLYVGSRKEGKVHYLPLPGSEAEKAGVRAGQLSMKFTMPSGIAYRDGKLYIADVGNLY
CCEEEEECCCCCCEEEEECCCCCHHHHCCEECEEEEEEECCCCCEEECCEEEEEECCCEE
RVDEAQSPGKASPTLIYDKLPKDLHHGWKYLKFAADGRLYIPIGAPCNICDAGKEYSKII
EECCCCCCCCCCCEEEECCCCHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHEE
SLDLETLTTRDEALGVRNSVGFDFAPTTGELWFTDNGRDMMGDDMPSDELNLLKTPGQHF
EEEHHHHHCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCHHHC
GYPYVHQGDTLDPEFGTGHSIQDYQAPKAKLGAHVASLGMTFYTGKQFPQKYQGGIFIAE
CCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEECCCCCCHHHCCCEEEEE
HGSWNRSEKVGYRVRFAKLNGNDVEYLETFAEGWLQGEEVHGRPADVMMLPDGSLLVSDD
CCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEECC
GRDRIYRIRYTGQTGADKGR
CCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
TSAKLSHALITLALMPFVATAYTKEENQAVLDMIKLPAGFEIEVLHHGFKNYRQMAVTE
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHEEEC
SGLLYVGSRKEGKVHYLPLPGSEAEKAGVRAGQLSMKFTMPSGIAYRDGKLYIADVGNLY
CCEEEEECCCCCCEEEEECCCCCHHHHCCEECEEEEEEECCCCCEEECCEEEEEECCCEE
RVDEAQSPGKASPTLIYDKLPKDLHHGWKYLKFAADGRLYIPIGAPCNICDAGKEYSKII
EECCCCCCCCCCCEEEECCCCHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHEE
SLDLETLTTRDEALGVRNSVGFDFAPTTGELWFTDNGRDMMGDDMPSDELNLLKTPGQHF
EEEHHHHHCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCHHHC
GYPYVHQGDTLDPEFGTGHSIQDYQAPKAKLGAHVASLGMTFYTGKQFPQKYQGGIFIAE
CCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEECCCCCCHHHCCCEEEEE
HGSWNRSEKVGYRVRFAKLNGNDVEYLETFAEGWLQGEEVHGRPADVMMLPDGSLLVSDD
CCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEECC
GRDRIYRIRYTGQTGADKGR
CCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]