| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is purE [H]
Identifier: 119774201
GI number: 119774201
Start: 1289153
End: 1289644
Strand: Reverse
Name: purE [H]
Synonym: Sama_1064
Alternate gene names: 119774201
Gene position: 1289644-1289153 (Counterclockwise)
Preceding gene: 119774202
Following gene: 119774200
Centisome position: 29.95
GC content: 59.96
Gene sequence:
>492_bases ATGCACGCCCTCGTTGCTGTCGTAATGGGTTCCAAGAGTGATTGGCCCACCATGGAAGCCGCCGCAGAGATCATGGATAA ACTGCAGGTGCCTTACCATGTTGAGGTGGTTTCCGCCCACAGAACCCCGGACAAGTTAATGGACTTCGCCGCCACAGCAG CTGACAAAGGCTTTCAGGTGATCATCGGTGGTGCCGGTGGCGCCGCACACCTGCCAGGCATGCTGGCCTCCAAAACCCGT CTGCCAGTCCTCGGTGTACCCGTGCAGAGTAAGGCCCTCAACGGCATGGATTCTTTGCTGTCTATCGTGCAAATGCCAAA GGGCATTGCCGTGGGCACCCTCGCCATCGGCACTGCCGGCGCCTTTAACGCAGGTCTGCTGGCTTGCCAAATTCTCGCCA ACAACGACGCCGCCCTCGCCGAGCGCCTGGAGGCATTCCGCGCCGAACAGACCCAGAGCGTTCTGGAAAATCCGGATCCG AGGGACGCGTAA
Upstream 100 bases:
>100_bases TGGCAACGACTACCGAGGGGACTCCCCCGCAGCCAGGGTGCAAAGTACCCTCGCCTGAAAACAGGCAAATATAATTAAAA TCAGTCGTTAAGGAGTTATC
Downstream 100 bases:
>100_bases TCATGGCAAACACCAAACGCGTTTGGGTACTGGGCAATGGTCAGCTCGGTGCTATGCTGTCACACGCCGGTCAGCCACTG GCCATCGAGGTGCTGCCGGT
Product: phosphoribosylaminoimidazole carboxylase
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MHALVAVVMGSKSDWPTMEAAAEIMDKLQVPYHVEVVSAHRTPDKLMDFAATAADKGFQVIIGGAGGAAHLPGMLASKTR LPVLGVPVQSKALNGMDSLLSIVQMPKGIAVGTLAIGTAGAFNAGLLACQILANNDAALAERLEAFRAEQTQSVLENPDP RDA
Sequences:
>Translated_163_residues MHALVAVVMGSKSDWPTMEAAAEIMDKLQVPYHVEVVSAHRTPDKLMDFAATAADKGFQVIIGGAGGAAHLPGMLASKTR LPVLGVPVQSKALNGMDSLLSIVQMPKGIAVGTLAIGTAGAFNAGLLACQILANNDAALAERLEAFRAEQTQSVLENPDP RDA >Mature_163_residues MHALVAVVMGSKSDWPTMEAAAEIMDKLQVPYHVEVVSAHRTPDKLMDFAATAADKGFQVIIGGAGGAAHLPGMLASKTR LPVLGVPVQSKALNGMDSLLSIVQMPKGIAVGTLAIGTAGAFNAGLLACQILANNDAALAERLEAFRAEQTQSVLENPDP RDA
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=161, Percent_Identity=70.8074534161491, Blast_Score=196, Evalue=6e-52, Organism=Saccharomyces cerevisiae, GI6324702, Length=152, Percent_Identity=48.6842105263158, Blast_Score=151, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 16914; Mature: 16914
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHALVAVVMGSKSDWPTMEAAAEIMDKLQVPYHVEVVSAHRTPDKLMDFAATAADKGFQV CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEE IIGGAGGAAHLPGMLASKTRLPVLGVPVQSKALNGMDSLLSIVQMPKGIAVGTLAIGTAG EEECCCCHHHCCCHHHHCCCCCEECCCCHHHHHCCHHHHHHHHHCCCCCEEEHEECCCCC AFNAGLLACQILANNDAALAERLEAFRAEQTQSVLENPDPRDA CCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MHALVAVVMGSKSDWPTMEAAAEIMDKLQVPYHVEVVSAHRTPDKLMDFAATAADKGFQV CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEE IIGGAGGAAHLPGMLASKTRLPVLGVPVQSKALNGMDSLLSIVQMPKGIAVGTLAIGTAG EEECCCCHHHCCCHHHHCCCCCEECCCCHHHHHCCHHHHHHHHHCCCCCEEEHEECCCCC AFNAGLLACQILANNDAALAERLEAFRAEQTQSVLENPDPRDA CCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA