Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774188

Identifier: 119774188

GI number: 119774188

Start: 1272910

End: 1273167

Strand: Direct

Name: 119774188

Synonym: Sama_1051

Alternate gene names: NA

Gene position: 1272910-1273167 (Clockwise)

Preceding gene: 119774187

Following gene: 119774189

Centisome position: 29.56

GC content: 53.88

Gene sequence:

>258_bases
ATGACATCAGTTATGGATCAAATGGGCGACGCCCTGTGGATCATGGTGCTGGGCATGGTGCTGGTGTACTTGTTTCTGGG
GATTTTGATCCTTGGGCTTAAGTTGATTGCCAATCGTTATGCACCCAAAGCCACGGACACAGCCAACAGGCCAGAGGCGC
CCAGTATTTCATCTAAGCCCCAAGGGCTGGATCCGCGTCTGGTGGCCGCTATCACCTCTGCCGTACAACAATATCGAGCC
CAGGAGGGACGTTCATGA

Upstream 100 bases:

>100_bases
TTTGCCGCCTGTTACATTTTGGCGTCGATAACGCTGAATGAAATATGTAAATGTGCGCATTTTTATGCGAGAAGAGCCAA
CAAACCTTTGAGGGGAAGTC

Downstream 100 bases:

>100_bases
CCAAAGCCTTGGCCCTTACCGATGTGGTGCTGCGCGATGCGCACCAATCCCTGCTAGCTACCCGTTTACGTATTGAAGAC
ATGTTGCCCATCGCTGCCAA

Product: oxaloacetate decarboxylase subunit gamma

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MTSVMDQMGDALWIMVLGMVLVYLFLGILILGLKLIANRYAPKATDTANRPEAPSISSKPQGLDPRLVAAITSAVQQYRA
QEGRS

Sequences:

>Translated_85_residues
MTSVMDQMGDALWIMVLGMVLVYLFLGILILGLKLIANRYAPKATDTANRPEAPSISSKPQGLDPRLVAAITSAVQQYRA
QEGRS
>Mature_84_residues
TSVMDQMGDALWIMVLGMVLVYLFLGILILGLKLIANRYAPKATDTANRPEAPSISSKPQGLDPRLVAAITSAVQQYRAQ
EGRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9234; Mature: 9103

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSVMDQMGDALWIMVLGMVLVYLFLGILILGLKLIANRYAPKATDTANRPEAPSISSKP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
QGLDPRLVAAITSAVQQYRAQEGRS
CCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSVMDQMGDALWIMVLGMVLVYLFLGILILGLKLIANRYAPKATDTANRPEAPSISSKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
QGLDPRLVAAITSAVQQYRAQEGRS
CCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA