Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774106

Identifier: 119774106

GI number: 119774106

Start: 1172778

End: 1173008

Strand: Direct

Name: 119774106

Synonym: Sama_0969

Alternate gene names: NA

Gene position: 1172778-1173008 (Clockwise)

Preceding gene: 119774105

Following gene: 119774107

Centisome position: 27.24

GC content: 53.25

Gene sequence:

>231_bases
ATGTTGTCCTGGATAAAGCGTGGTTGGAAAGCGTATACGGATTGGTGTGACCGCATGGGACTGACACCGGAAAATCGACG
CTGCTGTGCCCCCAGGTTGGAAGAGCCCGAACTCGCGTCAAAGCGCGCAAGACATTCCGGGGCAGAACATTCAGGGATGT
CCCATGTCACGGTCGCATCTGACGAGTGCCTGACAAAAAACACTGCAAAGAGTGACAGAAGCAGTGAATAA

Upstream 100 bases:

>100_bases
TTATCCCGACATTCAGTTTGCCAAGACCCGCGAGCATTAATCGCGGAACCAAAAGGCGGGGATACCCGCCTTTTTTATTG
CCTGTTGTCTGGAGGTGAGT

Downstream 100 bases:

>100_bases
GGTTTTAGAGGGCTGATTTACTGCGCTTATCTGACTACAAGAATTACTTCATCATGAGTACCGGAGGAAAAACCTTTGAC
GGCATCCCTGAGGCTCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MLSWIKRGWKAYTDWCDRMGLTPENRRCCAPRLEEPELASKRARHSGAEHSGMSHVTVASDECLTKNTAKSDRSSE

Sequences:

>Translated_76_residues
MLSWIKRGWKAYTDWCDRMGLTPENRRCCAPRLEEPELASKRARHSGAEHSGMSHVTVASDECLTKNTAKSDRSSE
>Mature_76_residues
MLSWIKRGWKAYTDWCDRMGLTPENRRCCAPRLEEPELASKRARHSGAEHSGMSHVTVASDECLTKNTAKSDRSSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8624; Mature: 8624

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSWIKRGWKAYTDWCDRMGLTPENRRCCAPRLEEPELASKRARHSGAEHSGMSHVTVAS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECC
DECLTKNTAKSDRSSE
CCHHHCCCCCCCCCCC
>Mature Secondary Structure
MLSWIKRGWKAYTDWCDRMGLTPENRRCCAPRLEEPELASKRARHSGAEHSGMSHVTVAS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECC
DECLTKNTAKSDRSSE
CCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA