Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is acpS

Identifier: 119774021

GI number: 119774021

Start: 1073007

End: 1073384

Strand: Direct

Name: acpS

Synonym: Sama_0884

Alternate gene names: 119774021

Gene position: 1073007-1073384 (Clockwise)

Preceding gene: 119774020

Following gene: 119774022

Centisome position: 24.92

GC content: 59.52

Gene sequence:

>378_bases
ATGTCAGTGCTCGGGCTGGGGACAGACATAGTTGAGATTGAACGTATCCGCAGCCAACTTGAGCGCGGTGGCGACAGGCT
CGCCAAGCGGATACTGACGGAATCCGAACTGGCGATTTTTGTCGGCAGCGGTCAGCGCGAGTTGTATCTTGCCAAGCGCT
TTGCCGCCAAGGAAGCGGTGGCCAAGGCGCTGGGTACAGGCATAGGTCGTGGCGTGTCGTTTCAACATATCGAGACCTAC
AGCGATGAGTTTGGTGCCCCCTGTGTACGCCTGAGTGACGGCGCCCTTGAGCGGATGCAGCAGCTGGGCGGCAGCCAAAT
CCGCCTGTCCATCGCCGATGAGCGGCATTATGCGGTGGCAACCGCCATACTCTGTTGA

Upstream 100 bases:

>100_bases
ATATTGGCCACGCCATTGTCGCCCGCAGTGCAATCGATGGCCTGGAGAAGGCCGTGCGCGACATGAAGCAGCTGATGCTT
GAAGGTCGTCGGGGCGAATA

Downstream 100 bases:

>100_bases
GTGCGTAAGTTTAAGGGAGCCTGGCTCCCTTTTTTTGTGGCTGGTGAAAGGTGGCTTGTTAATGAAGGCTTTCTTTGCTT
TACTGGTACATCCGTACCAA

Product: 4'-phosphopantetheinyl transferase

Products: NA

Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MSVLGLGTDIVEIERIRSQLERGGDRLAKRILTESELAIFVGSGQRELYLAKRFAAKEAVAKALGTGIGRGVSFQHIETY
SDEFGAPCVRLSDGALERMQQLGGSQIRLSIADERHYAVATAILC

Sequences:

>Translated_125_residues
MSVLGLGTDIVEIERIRSQLERGGDRLAKRILTESELAIFVGSGQRELYLAKRFAAKEAVAKALGTGIGRGVSFQHIETY
SDEFGAPCVRLSDGALERMQQLGGSQIRLSIADERHYAVATAILC
>Mature_124_residues
SVLGLGTDIVEIERIRSQLERGGDRLAKRILTESELAIFVGSGQRELYLAKRFAAKEAVAKALGTGIGRGVSFQHIETYS
DEFGAPCVRLSDGALERMQQLGGSQIRLSIADERHYAVATAILC

Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein

COG id: COG0736

COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the P-Pant transferase superfamily. AcpS family

Homologues:

Organism=Escherichia coli, GI1788916, Length=124, Percent_Identity=51.6129032258064, Blast_Score=132, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACPS_SHEAM (A1S3Y5)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_926761.1
- ProteinModelPortal:   A1S3Y5
- SMR:   A1S3Y5
- STRING:   A1S3Y5
- GeneID:   4603136
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_0884
- NMPDR:   fig|326297.7.peg.833
- eggNOG:   COG0736
- HOGENOM:   HBG734479
- OMA:   NSSAIAY
- PhylomeDB:   A1S3Y5
- ProtClustDB:   PRK00070
- GO:   GO:0005737
- HAMAP:   MF_00101
- InterPro:   IPR008278
- InterPro:   IPR002582
- InterPro:   IPR004568
- ProDom:   PD004282
- TIGRFAMs:   TIGR00516
- TIGRFAMs:   TIGR00556

Pfam domain/function: PF01648 ACPS; SSF56214 4-PPT_transf

EC number: =2.7.8.7

Molecular weight: Translated: 13581; Mature: 13450

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLGLGTDIVEIERIRSQLERGGDRLAKRILTESELAIFVGSGQRELYLAKRFAAKEAV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHH
AKALGTGIGRGVSFQHIETYSDEFGAPCVRLSDGALERMQQLGGSQIRLSIADERHYAVA
HHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCEEEEEECCCCHHHHH
TAILC
HHHCC
>Mature Secondary Structure 
SVLGLGTDIVEIERIRSQLERGGDRLAKRILTESELAIFVGSGQRELYLAKRFAAKEAV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHH
AKALGTGIGRGVSFQHIETYSDEFGAPCVRLSDGALERMQQLGGSQIRLSIADERHYAVA
HHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCEEEEEECCCCHHHHH
TAILC
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA