Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773881

Identifier: 119773881

GI number: 119773881

Start: 909754

End: 910173

Strand: Direct

Name: 119773881

Synonym: Sama_0743

Alternate gene names: NA

Gene position: 909754-910173 (Clockwise)

Preceding gene: 119773880

Following gene: 119773884

Centisome position: 21.13

GC content: 57.14

Gene sequence:

>420_bases
ATGGACAAAACCCAAATTGCCCGAGGCGCTTGCTTGTGCGGTGCCATTAATGTGGACATCGATTTGCCACCCAAGTGGGT
CGCCCATTGCCACTGCACTCAGTGCCAACATGCCCACGGGGCGGCGTTTGTGACCTGGGTAGGGGTGAGTGAACCGGCTG
CGCGCATCAGCGACCCTGAGCAGCAGCTGCAATGGTTTGCCTCCTCACAGGCGGCGCGGCGGGGATTTTGCCGCCGCTGC
GGCAGCAGTTTGTTTTTTACTTCCAGCCGCTGGCCGGGTGAACTACACATAGTCCGTGCCTGTTTTCATGACCCCATAGC
TCAGTTGCCCATGGCCCATGTGTTTTACGATACCCATGTGGATTGGTTTGAGGTGCGCGATAATCTGCCCAAAAAAAAAG
CTGCCCAAGAGGTCGGTTGA

Upstream 100 bases:

>100_bases
TTTCAGGGTGGCGTTTAAACGGCCAGTTCACTGGACAATGAGCCTGTGGTTGCCAACAATGGCAATATCCTCTGTTGAAT
CAACCCGGGTGAGTACTGGT

Downstream 100 bases:

>100_bases
TTCGCTTTTTATGCTGCTTGCTGCAGCCATGAAGGGTTTAGTGCAAAGGCGCTGAAAAAAAGACCGATGGAGTTGCCATC
GGTCTTTGGTTTTCACTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MDKTQIARGACLCGAINVDIDLPPKWVAHCHCTQCQHAHGAAFVTWVGVSEPAARISDPEQQLQWFASSQAARRGFCRRC
GSSLFFTSSRWPGELHIVRACFHDPIAQLPMAHVFYDTHVDWFEVRDNLPKKKAAQEVG

Sequences:

>Translated_139_residues
MDKTQIARGACLCGAINVDIDLPPKWVAHCHCTQCQHAHGAAFVTWVGVSEPAARISDPEQQLQWFASSQAARRGFCRRC
GSSLFFTSSRWPGELHIVRACFHDPIAQLPMAHVFYDTHVDWFEVRDNLPKKKAAQEVG
>Mature_139_residues
MDKTQIARGACLCGAINVDIDLPPKWVAHCHCTQCQHAHGAAFVTWVGVSEPAARISDPEQQLQWFASSQAARRGFCRRC
GSSLFFTSSRWPGELHIVRACFHDPIAQLPMAHVFYDTHVDWFEVRDNLPKKKAAQEVG

Specific function: Unknown

COG id: COG3791

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15575; Mature: 15575

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKTQIARGACLCGAINVDIDLPPKWVAHCHCTQCQHAHGAAFVTWVGVSEPAARISDPE
CCCCHHHCCEEEEEEEEECCCCCHHHHHHHCHHHCCCCCCCEEEEEECCCCCHHHCCCHH
QQLQWFASSQAARRGFCRRCGSSLFFTSSRWPGELHIVRACFHDPIAQLPMAHVFYDTHV
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCHHHHCCHHHHHCCCCC
DWFEVRDNLPKKKAAQEVG
HHHHHHCCCCHHHHHHCCC
>Mature Secondary Structure
MDKTQIARGACLCGAINVDIDLPPKWVAHCHCTQCQHAHGAAFVTWVGVSEPAARISDPE
CCCCHHHCCEEEEEEEEECCCCCHHHHHHHCHHHCCCCCCCEEEEEECCCCCHHHCCCHH
QQLQWFASSQAARRGFCRRCGSSLFFTSSRWPGELHIVRACFHDPIAQLPMAHVFYDTHV
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCHHHHCCHHHHHCCCCC
DWFEVRDNLPKKKAAQEVG
HHHHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA