| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is yibF [C]
Identifier: 119773802
GI number: 119773802
Start: 819503
End: 820105
Strand: Direct
Name: yibF [C]
Synonym: Sama_0664
Alternate gene names: 119773802
Gene position: 819503-820105 (Clockwise)
Preceding gene: 119773801
Following gene: 119773804
Centisome position: 19.03
GC content: 52.07
Gene sequence:
>603_bases ATGAAGCTTTTATGCTCTGCACCTTCGCCTTATTCCCGCATGGTCCGAATCATGGTGCGCTACCTGGAATTGGATGTCGA AGAGCTGAACACCAATCCATTGGATAATGGTGATACCTTGCTCAGTGCCAATCCGCTGGGGCAAATTCCCTGTTTGTTTT TGAACGATGGCGCCGCCTTATATGACAGCGAAGTGATCTGCCGCTACCTTGATGCGACCTACGCCAAGAGTCAGTTGTTT GGTGAGCCTGGTTTGGATTGGCATGCCCAGTGCCAGTTTTCACTGCTGAAAGGGCTTATCGACAGTGCAGTAAAACTGCG GCAGGAACAGATGCGTGAAGAAGAGGGGGTACGCTCAGCGTTTTGGACCTCGCGTTTTGAAGAGGCGCTCTTGAGGGGGA TTCGTGAGCTTGAGCGTCAGGGCGCAGGTTCTTCTGACCGCATCAATGCCCGCAGCATGGCGTTGGTGTGTTTATTGGAT TATATGGACTACCGACATCCGGCACTGGAATGGCGTAACCTTGCTCCCGCTCTGACACTGTGGTTTGAAGAGGTACGCGA ACTGCCAATATTCCGTGAAACCCGTCCGGATATTGTCTGCTAA
Upstream 100 bases:
>100_bases CCAGGCATTGTTGCTGGAACGTGGTCTTAGTAAAAACCTTCGCAGGGCACCCGGGCAAATCACCGTGGAAAAATACTGGT AAACACACAAGGAACTCTCC
Downstream 100 bases:
>100_bases ACATCGGTAATGCGTCGCCCTTTGGGGAGTTGACGTTTGTTTTTTTCACCGAAATGTCCATACAGCTCTTCGGTCAGCCC ATACCTGGCCCGACGATCTG
Product: glutathione S-transferase family protein
Products: NA
Alternate protein names: Glutathione S-Transferase; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Glutathione S-Transferase Related Protein; Glutathione Transferase; Gst Protein; Glutathione S-Transferase C-Terminal Domain-Containing; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase N- Domain; Glutathione S-Transferase With Thioredoxin-Like Domain; Glutathione S-Transferase PARB; Glutathione S-Transferase Ta
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MKLLCSAPSPYSRMVRIMVRYLELDVEELNTNPLDNGDTLLSANPLGQIPCLFLNDGAALYDSEVICRYLDATYAKSQLF GEPGLDWHAQCQFSLLKGLIDSAVKLRQEQMREEEGVRSAFWTSRFEEALLRGIRELERQGAGSSDRINARSMALVCLLD YMDYRHPALEWRNLAPALTLWFEEVRELPIFRETRPDIVC
Sequences:
>Translated_200_residues MKLLCSAPSPYSRMVRIMVRYLELDVEELNTNPLDNGDTLLSANPLGQIPCLFLNDGAALYDSEVICRYLDATYAKSQLF GEPGLDWHAQCQFSLLKGLIDSAVKLRQEQMREEEGVRSAFWTSRFEEALLRGIRELERQGAGSSDRINARSMALVCLLD YMDYRHPALEWRNLAPALTLWFEEVRELPIFRETRPDIVC >Mature_200_residues MKLLCSAPSPYSRMVRIMVRYLELDVEELNTNPLDNGDTLLSANPLGQIPCLFLNDGAALYDSEVICRYLDATYAKSQLF GEPGLDWHAQCQFSLLKGLIDSAVKLRQEQMREEEGVRSAFWTSRFEEALLRGIRELERQGAGSSDRINARSMALVCLLD YMDYRHPALEWRNLAPALTLWFEEVRELPIFRETRPDIVC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790018, Length=207, Percent_Identity=24.6376811594203, Blast_Score=64, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22951; Mature: 22951
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLCSAPSPYSRMVRIMVRYLELDVEELNTNPLDNGDTLLSANPLGQIPCLFLNDGAAL CCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEECCCCHH YDSEVICRYLDATYAKSQLFGEPGLDWHAQCQFSLLKGLIDSAVKLRQEQMREEEGVRSA HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWTSRFEEALLRGIRELERQGAGSSDRINARSMALVCLLDYMDYRHPALEWRNLAPALTL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH WFEEVRELPIFRETRPDIVC HHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKLLCSAPSPYSRMVRIMVRYLELDVEELNTNPLDNGDTLLSANPLGQIPCLFLNDGAAL CCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEECCCCHH YDSEVICRYLDATYAKSQLFGEPGLDWHAQCQFSLLKGLIDSAVKLRQEQMREEEGVRSA HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWTSRFEEALLRGIRELERQGAGSSDRINARSMALVCLLDYMDYRHPALEWRNLAPALTL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH WFEEVRELPIFRETRPDIVC HHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA