Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yibF [C]

Identifier: 119773802

GI number: 119773802

Start: 819503

End: 820105

Strand: Direct

Name: yibF [C]

Synonym: Sama_0664

Alternate gene names: 119773802

Gene position: 819503-820105 (Clockwise)

Preceding gene: 119773801

Following gene: 119773804

Centisome position: 19.03

GC content: 52.07

Gene sequence:

>603_bases
ATGAAGCTTTTATGCTCTGCACCTTCGCCTTATTCCCGCATGGTCCGAATCATGGTGCGCTACCTGGAATTGGATGTCGA
AGAGCTGAACACCAATCCATTGGATAATGGTGATACCTTGCTCAGTGCCAATCCGCTGGGGCAAATTCCCTGTTTGTTTT
TGAACGATGGCGCCGCCTTATATGACAGCGAAGTGATCTGCCGCTACCTTGATGCGACCTACGCCAAGAGTCAGTTGTTT
GGTGAGCCTGGTTTGGATTGGCATGCCCAGTGCCAGTTTTCACTGCTGAAAGGGCTTATCGACAGTGCAGTAAAACTGCG
GCAGGAACAGATGCGTGAAGAAGAGGGGGTACGCTCAGCGTTTTGGACCTCGCGTTTTGAAGAGGCGCTCTTGAGGGGGA
TTCGTGAGCTTGAGCGTCAGGGCGCAGGTTCTTCTGACCGCATCAATGCCCGCAGCATGGCGTTGGTGTGTTTATTGGAT
TATATGGACTACCGACATCCGGCACTGGAATGGCGTAACCTTGCTCCCGCTCTGACACTGTGGTTTGAAGAGGTACGCGA
ACTGCCAATATTCCGTGAAACCCGTCCGGATATTGTCTGCTAA

Upstream 100 bases:

>100_bases
CCAGGCATTGTTGCTGGAACGTGGTCTTAGTAAAAACCTTCGCAGGGCACCCGGGCAAATCACCGTGGAAAAATACTGGT
AAACACACAAGGAACTCTCC

Downstream 100 bases:

>100_bases
ACATCGGTAATGCGTCGCCCTTTGGGGAGTTGACGTTTGTTTTTTTCACCGAAATGTCCATACAGCTCTTCGGTCAGCCC
ATACCTGGCCCGACGATCTG

Product: glutathione S-transferase family protein

Products: NA

Alternate protein names: Glutathione S-Transferase; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Glutathione S-Transferase Related Protein; Glutathione Transferase; Gst Protein; Glutathione S-Transferase C-Terminal Domain-Containing; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase N- Domain; Glutathione S-Transferase With Thioredoxin-Like Domain; Glutathione S-Transferase PARB; Glutathione S-Transferase Ta

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKLLCSAPSPYSRMVRIMVRYLELDVEELNTNPLDNGDTLLSANPLGQIPCLFLNDGAALYDSEVICRYLDATYAKSQLF
GEPGLDWHAQCQFSLLKGLIDSAVKLRQEQMREEEGVRSAFWTSRFEEALLRGIRELERQGAGSSDRINARSMALVCLLD
YMDYRHPALEWRNLAPALTLWFEEVRELPIFRETRPDIVC

Sequences:

>Translated_200_residues
MKLLCSAPSPYSRMVRIMVRYLELDVEELNTNPLDNGDTLLSANPLGQIPCLFLNDGAALYDSEVICRYLDATYAKSQLF
GEPGLDWHAQCQFSLLKGLIDSAVKLRQEQMREEEGVRSAFWTSRFEEALLRGIRELERQGAGSSDRINARSMALVCLLD
YMDYRHPALEWRNLAPALTLWFEEVRELPIFRETRPDIVC
>Mature_200_residues
MKLLCSAPSPYSRMVRIMVRYLELDVEELNTNPLDNGDTLLSANPLGQIPCLFLNDGAALYDSEVICRYLDATYAKSQLF
GEPGLDWHAQCQFSLLKGLIDSAVKLRQEQMREEEGVRSAFWTSRFEEALLRGIRELERQGAGSSDRINARSMALVCLLD
YMDYRHPALEWRNLAPALTLWFEEVRELPIFRETRPDIVC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790018, Length=207, Percent_Identity=24.6376811594203, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22951; Mature: 22951

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLCSAPSPYSRMVRIMVRYLELDVEELNTNPLDNGDTLLSANPLGQIPCLFLNDGAAL
CCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEECCCCHH
YDSEVICRYLDATYAKSQLFGEPGLDWHAQCQFSLLKGLIDSAVKLRQEQMREEEGVRSA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWTSRFEEALLRGIRELERQGAGSSDRINARSMALVCLLDYMDYRHPALEWRNLAPALTL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
WFEEVRELPIFRETRPDIVC
HHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKLLCSAPSPYSRMVRIMVRYLELDVEELNTNPLDNGDTLLSANPLGQIPCLFLNDGAAL
CCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEECCCCHH
YDSEVICRYLDATYAKSQLFGEPGLDWHAQCQFSLLKGLIDSAVKLRQEQMREEEGVRSA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWTSRFEEALLRGIRELERQGAGSSDRINARSMALVCLLDYMDYRHPALEWRNLAPALTL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
WFEEVRELPIFRETRPDIVC
HHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA