| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is aroG [H]
Identifier: 119773795
GI number: 119773795
Start: 813803
End: 814861
Strand: Direct
Name: aroG [H]
Synonym: Sama_0657
Alternate gene names: 119773795
Gene position: 813803-814861 (Clockwise)
Preceding gene: 119773792
Following gene: 119773797
Centisome position: 18.9
GC content: 53.64
Gene sequence:
>1059_bases ATGTATTACCAAAATGATGACGTTCGTATTAATGAAGTAAAAGAATTGCTGCCACCTATCGCCATTCTCGAGCGATTTCC TGCAACAGAGAACGCATCTGCCACGGTTTTTAATGCCCGGAGCAATATTCACAACTTGCTGGCAAAAAAAGACGATCGCC TGCTGGTCGTGATTGGCCCCTGTTCAATTCACGACCCCGAAGCGGCGCTGGAATACGGTCAGCGTTTGCTTGCACTGAGA GAACAATATAGCGACCAGCTGGAAGTGGTGATGCGGGTGTATTTTGAAAAGCCCAGAACCACGGTTGGCTGGAAAGGCTT GATAAACGATCCCTACATGGACAACAGCTTTAAGCTGAATGATGGCCTGCGCACGGCCCGCAAGTTGTTGTTGGAATTGA ACCACATGGGCATGCCGACTGCGGGTGAATTTCTCGATATGATCACGCCCCAATATGTTGCTGACCTCATGTGTTGGGGG GCCATTGGCGCTCGCACCACTGAGTCTCAGGTGCACAGGGAGCTGGCGTCCGGTCTCTCCTGCCCGGTTGGGTTCAAAAA TGGCACCGACGGCACCATCAAAATTGCCATCGATGCCATAGGCGCGGCGGCTGCGCCCCACCACTTTTTGTCGGTGACCA AGTTTGGACACTCAGCCATTGTGTCCACCAAGGGTAATCCGGACTGCCACATTATTCTTCGCGGTGGTCGCGAGCCCAAT TACAGCCGCGAGCATGTCGCCAAGATCCAGACCGAGCTGCAAAGCGCTGGGTTGCCTGACAATGTGATGATTGATTTCAG CCATGCCAACAGCAGCAAACAATTCACTCGCCAGATGGTTGTCGCCGATGATGTTGCCGGTCAGCTTGCCGATGGTAACA AAGGGATTTTCGGTGTGATGGTTGAAAGTCATCTGAATGAAGGTCGTCAGGAGCATATCCCGGGCGTGCCGCTGGAATAT GGCAAAAGCGTCACAGATGCCTGCCTTGGCTGGGACGACAGCGCCAAGCTGCTCGCTACCCTGAATCAGGCCGTGCTGGC AAGGCGCGAGCGTAGCTGA
Upstream 100 bases:
>100_bases TATATCTTGATTGCCACCGCTTCGTTTAGTCGCTAAATTGACAGGGTCATAACAGATAGAGAGACACCTGATTTAACCCA TTCCGGAGCTTGCAAAGCCT
Downstream 100 bases:
>100_bases TATCAAAAAGGCGCCTGAGGCGCCTTTTCTTTTACTTATACTTACTTTTTCAGGTTTTGCGCCAAGTACTCATTGGCCTT GGCCAGGCTGCCAAAAGAAT
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MYYQNDDVRINEVKELLPPIAILERFPATENASATVFNARSNIHNLLAKKDDRLLVVIGPCSIHDPEAALEYGQRLLALR EQYSDQLEVVMRVYFEKPRTTVGWKGLINDPYMDNSFKLNDGLRTARKLLLELNHMGMPTAGEFLDMITPQYVADLMCWG AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKIAIDAIGAAAAPHHFLSVTKFGHSAIVSTKGNPDCHIILRGGREPN YSREHVAKIQTELQSAGLPDNVMIDFSHANSSKQFTRQMVVADDVAGQLADGNKGIFGVMVESHLNEGRQEHIPGVPLEY GKSVTDACLGWDDSAKLLATLNQAVLARRERS
Sequences:
>Translated_352_residues MYYQNDDVRINEVKELLPPIAILERFPATENASATVFNARSNIHNLLAKKDDRLLVVIGPCSIHDPEAALEYGQRLLALR EQYSDQLEVVMRVYFEKPRTTVGWKGLINDPYMDNSFKLNDGLRTARKLLLELNHMGMPTAGEFLDMITPQYVADLMCWG AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKIAIDAIGAAAAPHHFLSVTKFGHSAIVSTKGNPDCHIILRGGREPN YSREHVAKIQTELQSAGLPDNVMIDFSHANSSKQFTRQMVVADDVAGQLADGNKGIFGVMVESHLNEGRQEHIPGVPLEY GKSVTDACLGWDDSAKLLATLNQAVLARRERS >Mature_352_residues MYYQNDDVRINEVKELLPPIAILERFPATENASATVFNARSNIHNLLAKKDDRLLVVIGPCSIHDPEAALEYGQRLLALR EQYSDQLEVVMRVYFEKPRTTVGWKGLINDPYMDNSFKLNDGLRTARKLLLELNHMGMPTAGEFLDMITPQYVADLMCWG AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKIAIDAIGAAAAPHHFLSVTKFGHSAIVSTKGNPDCHIILRGGREPN YSREHVAKIQTELQSAGLPDNVMIDFSHANSSKQFTRQMVVADDVAGQLADGNKGIFGVMVESHLNEGRQEHIPGVPLEY GKSVTDACLGWDDSAKLLATLNQAVLARRERS
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=349, Percent_Identity=74.2120343839541, Blast_Score=543, Evalue=1e-156, Organism=Escherichia coli, GI1787996, Length=345, Percent_Identity=52.463768115942, Blast_Score=389, Evalue=1e-109, Organism=Escherichia coli, GI1788953, Length=339, Percent_Identity=53.3923303834808, Blast_Score=379, Evalue=1e-106, Organism=Saccharomyces cerevisiae, GI6320240, Length=368, Percent_Identity=49.4565217391304, Blast_Score=355, Evalue=7e-99, Organism=Saccharomyces cerevisiae, GI6319726, Length=352, Percent_Identity=50.8522727272727, Blast_Score=355, Evalue=7e-99,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38779; Mature: 38779
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYQNDDVRINEVKELLPPIAILERFPATENASATVFNARSNIHNLLAKKDDRLLVVIGP CCCCCCCCCHHHHHHHHCHHHHHHHCCCCCCCCEEEEECHHHHHHHHHCCCCCEEEEECC CSIHDPEAALEYGQRLLALREQYSDQLEVVMRVYFEKPRTTVGWKGLINDPYMDNSFKLN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECC DGLRTARKLLLELNHMGMPTAGEFLDMITPQYVADLMCWGAIGARTTESQVHRELASGLS HHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC CPVGFKNGTDGTIKIAIDAIGAAAAPHHFLSVTKFGHSAIVSTKGNPDCHIILRGGREPN CCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCC YSREHVAKIQTELQSAGLPDNVMIDFSHANSSKQFTRQMVVADDVAGQLADGNKGIFGVM CCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE VESHLNEGRQEHIPGVPLEYGKSVTDACLGWDDSAKLLATLNQAVLARRERS EHHHHCCCHHHCCCCCCHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYYQNDDVRINEVKELLPPIAILERFPATENASATVFNARSNIHNLLAKKDDRLLVVIGP CCCCCCCCCHHHHHHHHCHHHHHHHCCCCCCCCEEEEECHHHHHHHHHCCCCCEEEEECC CSIHDPEAALEYGQRLLALREQYSDQLEVVMRVYFEKPRTTVGWKGLINDPYMDNSFKLN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECC DGLRTARKLLLELNHMGMPTAGEFLDMITPQYVADLMCWGAIGARTTESQVHRELASGLS HHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC CPVGFKNGTDGTIKIAIDAIGAAAAPHHFLSVTKFGHSAIVSTKGNPDCHIILRGGREPN CCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCC YSREHVAKIQTELQSAGLPDNVMIDFSHANSSKQFTRQMVVADDVAGQLADGNKGIFGVM CCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE VESHLNEGRQEHIPGVPLEYGKSVTDACLGWDDSAKLLATLNQAVLARRERS EHHHHCCCHHHCCCCCCHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]