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The map label for this gene is bdlA [H]

Identifier: 119773792

GI number: 119773792

Start: 809748

End: 811064

Strand: Direct

Name: bdlA [H]

Synonym: Sama_0654

Alternate gene names: 119773792

Gene position: 809748-811064 (Clockwise)

Preceding gene: 119773791

Following gene: 119773795

Centisome position: 18.8

GC content: 52.7

Gene sequence:

>1317_bases
ATGTTTAATCAAAAATTGAAGCAATCATTGGCCTCTTATCGGTCGGAAATTCAACGATATCAGGCGCGGGCAGCCGCCGT
CAGCGCGTCAACGGCGATGATAGAATTTTTGCCGGACGGCACTATTGTCACCGCCAATGACAATTTTTTGTCCCTTGTGG
GATACCGACTCGAAGATATCCAGGGAAAACATCACCGTATTTTTTGTACTCCTGAGTATGCCAACAGCCATGAATACAAA
GCATTTTGGCGAAGTTTGGCAGCGGGGGAACACGCCAGTGGTCGCTTTTTACGGCTTGGTCGGGATGGCAAAAATCTGTG
GCTTGGCGCCTCTTACAATCCCATTCGCAATGAAGAAGGCAAGGTGGTGAGCGTCTTGAAGCTGGCAGCGGATGTCACGG
AAATTGTGGAAATCGAAAACGAACAGCAAAGCATGATAAATGCAATCGATCGTTCCATGGCGGTAATTGAATTTACCACA
GACGGCGAGGTAATCCGGGCCAATGAAAACTTTTTGGCCGTAACCGGATATCGTCTGGATGAAATCAAGGGGAAACACCA
CCGGCTTTTTTGTGCGCCAGAATATGCGGCCTCACAGGAATATAAGCACTTCTGGTCTCGCTTGAATCAGGGGGAGTTTT
TTACCGGCCGTTTTCAGCGTCAGGATAAATTGGGACGGACAATTTGGCTCAGCGCCACCTATAACCCTGTGTATGACGCG
CGCGGTGAGCTGTATAAAATTGTCAAGTTTGCCAACGACATTACCGAGCGGGTGAATCAACAGCAGGCAGAGTCGGCCGC
TGCCGTGCTGGCGTATGATATTGCGCTGACTACCGACGCCAATGCGCGCAGCGGTGCCCAGGTGGTACAGTCCACCGTTG
AGGTGGTGAGAGGCATTGCCGAGGAAATTAATCTTGCTGCCAGGGGCATTGAGGATGTGAGCAACCAGTCGGAGAAGATA
GGCAATATCGTGCAAACCATTCGCAGTATTGCCGATCAGACCAACCTGCTTGCCCTGAACGCGGCCATTGAGGCTGCACG
GGCCGGGGAGCAGGGCCGCGGCTTTGCTGTCGTGGCCGATGAGGTTCGCAGCCTGGCGGCACGAACCGCCAATGCCACAG
TCGAAATCGTTGATGTGGTACGCCAAAATCAGGTCTTGTCCCAGGCAGCAGTGGCTAACATGGAGCAGAGCAAACACAAG
GTTGAGCAGGGCGTTGCCCTTGCCGTGGAGGCCGGCGAAGCCATAGAACAAATCCGGGAGGGGGCACAGCAGGTCGTGGC
CGCAGTGCAGGAGTTTAAATTACAGCTGGATAAATAA

Upstream 100 bases:

>100_bases
AATCAGTCCCTTATGTCGTACACTATCCGTTAGAGCCTGACGAGTCCTTTACTGTGTCATCGCAGGTCCATCGCAGATAT
GGGTTGTCGCGGAGAAACAG

Downstream 100 bases:

>100_bases
GTCAGACCGCTGAATACACCGCCAATATGGCATCAAGCTGACAAACAAAAGGCTCCCGGGGGAGCCTTTTCTCTGTCAGC
GTTACAACTGTAGCGCCTTG

Product: putative methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MFNQKLKQSLASYRSEIQRYQARAAAVSASTAMIEFLPDGTIVTANDNFLSLVGYRLEDIQGKHHRIFCTPEYANSHEYK
AFWRSLAAGEHASGRFLRLGRDGKNLWLGASYNPIRNEEGKVVSVLKLAADVTEIVEIENEQQSMINAIDRSMAVIEFTT
DGEVIRANENFLAVTGYRLDEIKGKHHRLFCAPEYAASQEYKHFWSRLNQGEFFTGRFQRQDKLGRTIWLSATYNPVYDA
RGELYKIVKFANDITERVNQQQAESAAAVLAYDIALTTDANARSGAQVVQSTVEVVRGIAEEINLAARGIEDVSNQSEKI
GNIVQTIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAARTANATVEIVDVVRQNQVLSQAAVANMEQSKHK
VEQGVALAVEAGEAIEQIREGAQQVVAAVQEFKLQLDK

Sequences:

>Translated_438_residues
MFNQKLKQSLASYRSEIQRYQARAAAVSASTAMIEFLPDGTIVTANDNFLSLVGYRLEDIQGKHHRIFCTPEYANSHEYK
AFWRSLAAGEHASGRFLRLGRDGKNLWLGASYNPIRNEEGKVVSVLKLAADVTEIVEIENEQQSMINAIDRSMAVIEFTT
DGEVIRANENFLAVTGYRLDEIKGKHHRLFCAPEYAASQEYKHFWSRLNQGEFFTGRFQRQDKLGRTIWLSATYNPVYDA
RGELYKIVKFANDITERVNQQQAESAAAVLAYDIALTTDANARSGAQVVQSTVEVVRGIAEEINLAARGIEDVSNQSEKI
GNIVQTIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAARTANATVEIVDVVRQNQVLSQAAVANMEQSKHK
VEQGVALAVEAGEAIEQIREGAQQVVAAVQEFKLQLDK
>Mature_438_residues
MFNQKLKQSLASYRSEIQRYQARAAAVSASTAMIEFLPDGTIVTANDNFLSLVGYRLEDIQGKHHRIFCTPEYANSHEYK
AFWRSLAAGEHASGRFLRLGRDGKNLWLGASYNPIRNEEGKVVSVLKLAADVTEIVEIENEQQSMINAIDRSMAVIEFTT
DGEVIRANENFLAVTGYRLDEIKGKHHRLFCAPEYAASQEYKHFWSRLNQGEFFTGRFQRQDKLGRTIWLSATYNPVYDA
RGELYKIVKFANDITERVNQQQAESAAAVLAYDIALTTDANARSGAQVVQSTVEVVRGIAEEINLAARGIEDVSNQSEKI
GNIVQTIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAARTANATVEIVDVVRQNQVLSQAAVANMEQSKHK
VEQGVALAVEAGEAIEQIREGAQQVVAAVQEFKLQLDK

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=188, Percent_Identity=38.8297872340425, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1788194, Length=219, Percent_Identity=35.6164383561644, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1788195, Length=170, Percent_Identity=38.2352941176471, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1789453, Length=118, Percent_Identity=42.3728813559322, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787690, Length=71, Percent_Identity=61.9718309859155, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 48499; Mature: 48499

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNQKLKQSLASYRSEIQRYQARAAAVSASTAMIEFLPDGTIVTANDNFLSLVGYRLEDI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCHHHHHHHHHHC
QGKHHRIFCTPEYANSHEYKAFWRSLAAGEHASGRFLRLGRDGKNLWLGASYNPIRNEEG
CCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCC
KVVSVLKLAADVTEIVEIENEQQSMINAIDRSMAVIEFTTDGEVIRANENFLAVTGYRLD
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEECCCCEEEECCCEEEEECCCHH
EIKGKHHRLFCAPEYAASQEYKHFWSRLNQGEFFTGRFQRQDKLGRTIWLSATYNPVYDA
HCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEECHHHHHHCCCCEEEEEECCCCCCCC
RGELYKIVKFANDITERVNQQQAESAAAVLAYDIALTTDANARSGAQVVQSTVEVVRGIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
EEINLAARGIEDVSNQSEKIGNIVQTIRSIADQTNLLALNAAIEAARAGEQGRGFAVVAD
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEEHH
EVRSLAARTANATVEIVDVVRQNQVLSQAAVANMEQSKHKVEQGVALAVEAGEAIEQIRE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHH
GAQQVVAAVQEFKLQLDK
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFNQKLKQSLASYRSEIQRYQARAAAVSASTAMIEFLPDGTIVTANDNFLSLVGYRLEDI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCHHHHHHHHHHC
QGKHHRIFCTPEYANSHEYKAFWRSLAAGEHASGRFLRLGRDGKNLWLGASYNPIRNEEG
CCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCC
KVVSVLKLAADVTEIVEIENEQQSMINAIDRSMAVIEFTTDGEVIRANENFLAVTGYRLD
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEECCCCEEEECCCEEEEECCCHH
EIKGKHHRLFCAPEYAASQEYKHFWSRLNQGEFFTGRFQRQDKLGRTIWLSATYNPVYDA
HCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEECHHHHHHCCCCEEEEEECCCCCCCC
RGELYKIVKFANDITERVNQQQAESAAAVLAYDIALTTDANARSGAQVVQSTVEVVRGIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
EEINLAARGIEDVSNQSEKIGNIVQTIRSIADQTNLLALNAAIEAARAGEQGRGFAVVAD
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEEHH
EVRSLAARTANATVEIVDVVRQNQVLSQAAVANMEQSKHKVEQGVALAVEAGEAIEQIRE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHH
GAQQVVAAVQEFKLQLDK
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]