| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119773774
Identifier: 119773774
GI number: 119773774
Start: 792246
End: 793391
Strand: Direct
Name: 119773774
Synonym: Sama_0636
Alternate gene names: NA
Gene position: 792246-793391 (Clockwise)
Preceding gene: 119773773
Following gene: 119773780
Centisome position: 18.4
GC content: 59.25
Gene sequence:
>1146_bases ATGTGGCAGATTTTCGTGCGTTTTTTCATGTTGGGATTGACCAGCTTCGGTGGGCCTGCGGCCCATATCGGTTACTTCAG ACACACCTTTGTCAACGAACTCAATTGGGTCGATGAAAAGCGGTTCGGTGCCCTGGTGGCATTGTCGCAGTTTTTGCCCG GGCCCGGTTCCAGCCAGCTGGGATTTGCCATCGGACTCACCCGTGGCGGCCTTGGTGGCGCGCTGGCAGCGTTTATTGGT TTTACCCTGCCATCGGCCATGTTGATGTATCTGCTGGCCGTGACCAGTGCCAATCTGCTGGGGCAGTCCTGGTTTGATGG TCTGATCCACGGACTTAAACTGCTTGCCGTGGTGGTGGTGATGGATGCCTGTCTTGGCATGTTCCGCCAGTTTTGTCAGC ACAGGGCAGCAAGACTGATTATGGCTGCCAGCACCATAGCGCTGCTGCTCTTCGGACTCAGTTGGGTGCAGTTTGTTGTA CTGGCTCTGGCGGCCGTGGTCGGTGTGATCTGTTTGTCGCCTGCGGGAGAGGCGGGGGGCAAGCTTGCCGGCATCGGCTG GGGCTGGCTGCTGGCCTTTACGCTGTTCCTTGTCGGCGCCTTTTATGGTGTCGAAGCCTTCAGCGGCGGCAGTGAGGCCT GGCTTGCGGCAGTGAACTTTCAGGCTGGCTCTCTGGTGTTCGGCGGTGGCCATGTGGTGCTGCCGCTGCTGGAAGGGCAC TTTGGTGAGCTGATGTCGCCGGACAGATTTTTGACTGGCTATGCTGCTGCCCAGGCAATCCCCGGCCCCATGTTTACCCT GTCGACCTTTTTGGGCGCCGATGCAGCGACCGGGGATGCTGTGCTTGGCGCTGTGATTGCGACCCTGGCTATCTTCCTGC CGGGCTTTTTATTGTTGCTGGCGTTTCTTCCCGCCTGGGAGGGCCTGAGCCAACGCCCCAGGGTTGCAGGTGCCGTGGCG GGCGTAAATGCTGCCGTGGTGGGACTGCTGCTCAGTGCGCTCTATCAGCCGATATGGCTCTCTGCTGTGGTGGGTCCCAT GGACATGGCACTGGTGGTTGCCGGTTTTGCGGCCTTAAAGGTGCTCAGGTTGCCCATTCTCGTGCTGGTGGCAGGCTTTG CACTGATTGGTGGGGTTTTGCTGTAA
Upstream 100 bases:
>100_bases AACCCAAAACCACCGCGTCAGCGGTGGTTTTTTTATGTCAACTTGATGTCACAAAGATGTCATACTCTGATGCCATTGCA TTGGAGGAAAACTCAGGGCT
Downstream 100 bases:
>100_bases GGGATGGACTCAACATAATAAAAAAACCAGCGCCAAGGCGCTGGTTTTTTTATTGTCAGACCGGCAATTACATGCCGAGA AATGACTTGGACTTGGTCTT
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MWQIFVRFFMLGLTSFGGPAAHIGYFRHTFVNELNWVDEKRFGALVALSQFLPGPGSSQLGFAIGLTRGGLGGALAAFIG FTLPSAMLMYLLAVTSANLLGQSWFDGLIHGLKLLAVVVVMDACLGMFRQFCQHRAARLIMAASTIALLLFGLSWVQFVV LALAAVVGVICLSPAGEAGGKLAGIGWGWLLAFTLFLVGAFYGVEAFSGGSEAWLAAVNFQAGSLVFGGGHVVLPLLEGH FGELMSPDRFLTGYAAAQAIPGPMFTLSTFLGADAATGDAVLGAVIATLAIFLPGFLLLLAFLPAWEGLSQRPRVAGAVA GVNAAVVGLLLSALYQPIWLSAVVGPMDMALVVAGFAALKVLRLPILVLVAGFALIGGVLL
Sequences:
>Translated_381_residues MWQIFVRFFMLGLTSFGGPAAHIGYFRHTFVNELNWVDEKRFGALVALSQFLPGPGSSQLGFAIGLTRGGLGGALAAFIG FTLPSAMLMYLLAVTSANLLGQSWFDGLIHGLKLLAVVVVMDACLGMFRQFCQHRAARLIMAASTIALLLFGLSWVQFVV LALAAVVGVICLSPAGEAGGKLAGIGWGWLLAFTLFLVGAFYGVEAFSGGSEAWLAAVNFQAGSLVFGGGHVVLPLLEGH FGELMSPDRFLTGYAAAQAIPGPMFTLSTFLGADAATGDAVLGAVIATLAIFLPGFLLLLAFLPAWEGLSQRPRVAGAVA GVNAAVVGLLLSALYQPIWLSAVVGPMDMALVVAGFAALKVLRLPILVLVAGFALIGGVLL >Mature_381_residues MWQIFVRFFMLGLTSFGGPAAHIGYFRHTFVNELNWVDEKRFGALVALSQFLPGPGSSQLGFAIGLTRGGLGGALAAFIG FTLPSAMLMYLLAVTSANLLGQSWFDGLIHGLKLLAVVVVMDACLGMFRQFCQHRAARLIMAASTIALLLFGLSWVQFVV LALAAVVGVICLSPAGEAGGKLAGIGWGWLLAFTLFLVGAFYGVEAFSGGSEAWLAAVNFQAGSLVFGGGHVVLPLLEGH FGELMSPDRFLTGYAAAQAIPGPMFTLSTFLGADAATGDAVLGAVIATLAIFLPGFLLLLAFLPAWEGLSQRPRVAGAVA GVNAAVVGLLLSALYQPIWLSAVVGPMDMALVVAGFAALKVLRLPILVLVAGFALIGGVLL
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 39631; Mature: 39631
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQIFVRFFMLGLTSFGGPAAHIGYFRHTFVNELNWVDEKRFGALVALSQFLPGPGSSQL CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GFAIGLTRGGLGGALAAFIGFTLPSAMLMYLLAVTSANLLGQSWFDGLIHGLKLLAVVVV CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MDACLGMFRQFCQHRAARLIMAASTIALLLFGLSWVQFVVLALAAVVGVICLSPAGEAGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KLAGIGWGWLLAFTLFLVGAFYGVEAFSGGSEAWLAAVNFQAGSLVFGGGHVVLPLLEGH CEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCEEEEHHHHCH FGELMSPDRFLTGYAAAQAIPGPMFTLSTFLGADAATGDAVLGAVIATLAIFLPGFLLLL HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AFLPAWEGLSQRPRVAGAVAGVNAAVVGLLLSALYQPIWLSAVVGPMDMALVVAGFAALK HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLRLPILVLVAGFALIGGVLL HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MWQIFVRFFMLGLTSFGGPAAHIGYFRHTFVNELNWVDEKRFGALVALSQFLPGPGSSQL CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GFAIGLTRGGLGGALAAFIGFTLPSAMLMYLLAVTSANLLGQSWFDGLIHGLKLLAVVVV CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MDACLGMFRQFCQHRAARLIMAASTIALLLFGLSWVQFVVLALAAVVGVICLSPAGEAGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KLAGIGWGWLLAFTLFLVGAFYGVEAFSGGSEAWLAAVNFQAGSLVFGGGHVVLPLLEGH CEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCEEEEHHHHCH FGELMSPDRFLTGYAAAQAIPGPMFTLSTFLGADAATGDAVLGAVIATLAIFLPGFLLLL HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AFLPAWEGLSQRPRVAGAVAGVNAAVVGLLLSALYQPIWLSAVVGPMDMALVVAGFAALK HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLRLPILVLVAGFALIGGVLL HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]