Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773774

Identifier: 119773774

GI number: 119773774

Start: 792246

End: 793391

Strand: Direct

Name: 119773774

Synonym: Sama_0636

Alternate gene names: NA

Gene position: 792246-793391 (Clockwise)

Preceding gene: 119773773

Following gene: 119773780

Centisome position: 18.4

GC content: 59.25

Gene sequence:

>1146_bases
ATGTGGCAGATTTTCGTGCGTTTTTTCATGTTGGGATTGACCAGCTTCGGTGGGCCTGCGGCCCATATCGGTTACTTCAG
ACACACCTTTGTCAACGAACTCAATTGGGTCGATGAAAAGCGGTTCGGTGCCCTGGTGGCATTGTCGCAGTTTTTGCCCG
GGCCCGGTTCCAGCCAGCTGGGATTTGCCATCGGACTCACCCGTGGCGGCCTTGGTGGCGCGCTGGCAGCGTTTATTGGT
TTTACCCTGCCATCGGCCATGTTGATGTATCTGCTGGCCGTGACCAGTGCCAATCTGCTGGGGCAGTCCTGGTTTGATGG
TCTGATCCACGGACTTAAACTGCTTGCCGTGGTGGTGGTGATGGATGCCTGTCTTGGCATGTTCCGCCAGTTTTGTCAGC
ACAGGGCAGCAAGACTGATTATGGCTGCCAGCACCATAGCGCTGCTGCTCTTCGGACTCAGTTGGGTGCAGTTTGTTGTA
CTGGCTCTGGCGGCCGTGGTCGGTGTGATCTGTTTGTCGCCTGCGGGAGAGGCGGGGGGCAAGCTTGCCGGCATCGGCTG
GGGCTGGCTGCTGGCCTTTACGCTGTTCCTTGTCGGCGCCTTTTATGGTGTCGAAGCCTTCAGCGGCGGCAGTGAGGCCT
GGCTTGCGGCAGTGAACTTTCAGGCTGGCTCTCTGGTGTTCGGCGGTGGCCATGTGGTGCTGCCGCTGCTGGAAGGGCAC
TTTGGTGAGCTGATGTCGCCGGACAGATTTTTGACTGGCTATGCTGCTGCCCAGGCAATCCCCGGCCCCATGTTTACCCT
GTCGACCTTTTTGGGCGCCGATGCAGCGACCGGGGATGCTGTGCTTGGCGCTGTGATTGCGACCCTGGCTATCTTCCTGC
CGGGCTTTTTATTGTTGCTGGCGTTTCTTCCCGCCTGGGAGGGCCTGAGCCAACGCCCCAGGGTTGCAGGTGCCGTGGCG
GGCGTAAATGCTGCCGTGGTGGGACTGCTGCTCAGTGCGCTCTATCAGCCGATATGGCTCTCTGCTGTGGTGGGTCCCAT
GGACATGGCACTGGTGGTTGCCGGTTTTGCGGCCTTAAAGGTGCTCAGGTTGCCCATTCTCGTGCTGGTGGCAGGCTTTG
CACTGATTGGTGGGGTTTTGCTGTAA

Upstream 100 bases:

>100_bases
AACCCAAAACCACCGCGTCAGCGGTGGTTTTTTTATGTCAACTTGATGTCACAAAGATGTCATACTCTGATGCCATTGCA
TTGGAGGAAAACTCAGGGCT

Downstream 100 bases:

>100_bases
GGGATGGACTCAACATAATAAAAAAACCAGCGCCAAGGCGCTGGTTTTTTTATTGTCAGACCGGCAATTACATGCCGAGA
AATGACTTGGACTTGGTCTT

Product: chromate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MWQIFVRFFMLGLTSFGGPAAHIGYFRHTFVNELNWVDEKRFGALVALSQFLPGPGSSQLGFAIGLTRGGLGGALAAFIG
FTLPSAMLMYLLAVTSANLLGQSWFDGLIHGLKLLAVVVVMDACLGMFRQFCQHRAARLIMAASTIALLLFGLSWVQFVV
LALAAVVGVICLSPAGEAGGKLAGIGWGWLLAFTLFLVGAFYGVEAFSGGSEAWLAAVNFQAGSLVFGGGHVVLPLLEGH
FGELMSPDRFLTGYAAAQAIPGPMFTLSTFLGADAATGDAVLGAVIATLAIFLPGFLLLLAFLPAWEGLSQRPRVAGAVA
GVNAAVVGLLLSALYQPIWLSAVVGPMDMALVVAGFAALKVLRLPILVLVAGFALIGGVLL

Sequences:

>Translated_381_residues
MWQIFVRFFMLGLTSFGGPAAHIGYFRHTFVNELNWVDEKRFGALVALSQFLPGPGSSQLGFAIGLTRGGLGGALAAFIG
FTLPSAMLMYLLAVTSANLLGQSWFDGLIHGLKLLAVVVVMDACLGMFRQFCQHRAARLIMAASTIALLLFGLSWVQFVV
LALAAVVGVICLSPAGEAGGKLAGIGWGWLLAFTLFLVGAFYGVEAFSGGSEAWLAAVNFQAGSLVFGGGHVVLPLLEGH
FGELMSPDRFLTGYAAAQAIPGPMFTLSTFLGADAATGDAVLGAVIATLAIFLPGFLLLLAFLPAWEGLSQRPRVAGAVA
GVNAAVVGLLLSALYQPIWLSAVVGPMDMALVVAGFAALKVLRLPILVLVAGFALIGGVLL
>Mature_381_residues
MWQIFVRFFMLGLTSFGGPAAHIGYFRHTFVNELNWVDEKRFGALVALSQFLPGPGSSQLGFAIGLTRGGLGGALAAFIG
FTLPSAMLMYLLAVTSANLLGQSWFDGLIHGLKLLAVVVVMDACLGMFRQFCQHRAARLIMAASTIALLLFGLSWVQFVV
LALAAVVGVICLSPAGEAGGKLAGIGWGWLLAFTLFLVGAFYGVEAFSGGSEAWLAAVNFQAGSLVFGGGHVVLPLLEGH
FGELMSPDRFLTGYAAAQAIPGPMFTLSTFLGADAATGDAVLGAVIATLAIFLPGFLLLLAFLPAWEGLSQRPRVAGAVA
GVNAAVVGLLLSALYQPIWLSAVVGPMDMALVVAGFAALKVLRLPILVLVAGFALIGGVLL

Specific function: Unknown

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 39631; Mature: 39631

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWQIFVRFFMLGLTSFGGPAAHIGYFRHTFVNELNWVDEKRFGALVALSQFLPGPGSSQL
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GFAIGLTRGGLGGALAAFIGFTLPSAMLMYLLAVTSANLLGQSWFDGLIHGLKLLAVVVV
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MDACLGMFRQFCQHRAARLIMAASTIALLLFGLSWVQFVVLALAAVVGVICLSPAGEAGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KLAGIGWGWLLAFTLFLVGAFYGVEAFSGGSEAWLAAVNFQAGSLVFGGGHVVLPLLEGH
CEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCEEEEHHHHCH
FGELMSPDRFLTGYAAAQAIPGPMFTLSTFLGADAATGDAVLGAVIATLAIFLPGFLLLL
HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AFLPAWEGLSQRPRVAGAVAGVNAAVVGLLLSALYQPIWLSAVVGPMDMALVVAGFAALK
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRLPILVLVAGFALIGGVLL
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWQIFVRFFMLGLTSFGGPAAHIGYFRHTFVNELNWVDEKRFGALVALSQFLPGPGSSQL
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GFAIGLTRGGLGGALAAFIGFTLPSAMLMYLLAVTSANLLGQSWFDGLIHGLKLLAVVVV
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MDACLGMFRQFCQHRAARLIMAASTIALLLFGLSWVQFVVLALAAVVGVICLSPAGEAGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KLAGIGWGWLLAFTLFLVGAFYGVEAFSGGSEAWLAAVNFQAGSLVFGGGHVVLPLLEGH
CEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCEEEEHHHHCH
FGELMSPDRFLTGYAAAQAIPGPMFTLSTFLGADAATGDAVLGAVIATLAIFLPGFLLLL
HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AFLPAWEGLSQRPRVAGAVAGVNAAVVGLLLSALYQPIWLSAVVGPMDMALVVAGFAALK
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRLPILVLVAGFALIGGVLL
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]