| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119773761
Identifier: 119773761
GI number: 119773761
Start: 777448
End: 777702
Strand: Direct
Name: 119773761
Synonym: Sama_0623
Alternate gene names: NA
Gene position: 777448-777702 (Clockwise)
Preceding gene: 119773760
Following gene: 119773762
Centisome position: 18.05
GC content: 45.49
Gene sequence:
>255_bases GTGAAGGCACGCCTTGTGTCGGTATGTGTTGAATCTTTCTCTGTTCTGGGTTGGGCCTGGTTGCCCAAGGCTCTTTCTGA GTCAAGGGTGGCAGTTGATGGTATTTCGCCTCTCGAGGTCGATATGATGTTTGAAGGCGTGAAATTACCTATTTCACTTT GGTGCCAGCAGAGTAAAAACATAAAGGATATCAAGCACGTCATTCTCAAATCTATTCGCGAGCAAATGCAAAATTACGCC CAGAATGACGGATAA
Upstream 100 bases:
>100_bases TCAATTTAAGCTTTAACGTTGAACCGCGGAAACAGAGGGTGGAGGTGCGCTTTTTAACACCAAGCGTACTCCACCCTCTG TCGTCTCTGTCCCAGCCTGT
Downstream 100 bases:
>100_bases CCAATTCTTGTCTGCAAGGCTAGTACAGGCTAGGCTTTGCCCGCTGTAAAGCTGCTCTGTATGAGCCAATTTTACTTGTC AGTCAGGCTCAATTCAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MKARLVSVCVESFSVLGWAWLPKALSESRVAVDGISPLEVDMMFEGVKLPISLWCQQSKNIKDIKHVILKSIREQMQNYA QNDG
Sequences:
>Translated_84_residues MKARLVSVCVESFSVLGWAWLPKALSESRVAVDGISPLEVDMMFEGVKLPISLWCQQSKNIKDIKHVILKSIREQMQNYA QNDG >Mature_84_residues MKARLVSVCVESFSVLGWAWLPKALSESRVAVDGISPLEVDMMFEGVKLPISLWCQQSKNIKDIKHVILKSIREQMQNYA QNDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9492; Mature: 9492
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARLVSVCVESFSVLGWAWLPKALSESRVAVDGISPLEVDMMFEGVKLPISLWCQQSKN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCHHHHHHCCCCC IKDIKHVILKSIREQMQNYAQNDG HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKARLVSVCVESFSVLGWAWLPKALSESRVAVDGISPLEVDMMFEGVKLPISLWCQQSKN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCHHHHHHCCCCC IKDIKHVILKSIREQMQNYAQNDG HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA