Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773720

Identifier: 119773720

GI number: 119773720

Start: 726973

End: 727401

Strand: Direct

Name: 119773720

Synonym: Sama_0582

Alternate gene names: NA

Gene position: 726973-727401 (Clockwise)

Preceding gene: 119773719

Following gene: 119773721

Centisome position: 16.88

GC content: 47.32

Gene sequence:

>429_bases
ATGAAACGATTAATCATCAGTTTGATAGCTTGGTTACTCGTCTGCTTTCCTGTCAGAGCAGACGATGCCCTGTATGTGGT
GGTGAATACGACAAACGGCATTGAAAATTTGAGTCATCATGAAGTGGTAGATATTTTTATGGGACGCGACCGAACGTTTC
CGGACGGAAACAAGGTCACAGTATTCGATAACAGCAGTGACACCGAGACCCGGGCATTATTCTACAGACAGCTGGTCAAT
CGCAGCCTGGCACAGGTAAGCAGTTACTGGGCACGATTGCAGTTTTCGGCACGAGTCACACAACCCAGGGAAATAGGCCA
GCGGCAAGCCTTGCTTGAGTTGATGAACAGCACCCCCTCAGGTATTACTTTTGTCAAAAGCACTGAACTGGACCCGGCAT
TAAAGGTGGTATACAAATTTGATCCCTAA

Upstream 100 bases:

>100_bases
TAGACCCCAAGGGTTCGAGTCTCTGGGTTCGGGCATATCCCATGGGCCATGATGACAGGGTCAATCTGTTTTCCGTTAAT
CTGAGTTTTACCTTCTGACT

Downstream 100 bases:

>100_bases
TCGCCAGAAGCTTTATGTCAAAGTTGCTGTTGCCATCGCGGTGGGAGCCTTTCTCGCGGCAGTGGTCGCCTGCCTCTATT
TTTTCTGGGATGCGCGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKRLIISLIAWLLVCFPVRADDALYVVVNTTNGIENLSHHEVVDIFMGRDRTFPDGNKVTVFDNSSDTETRALFYRQLVN
RSLAQVSSYWARLQFSARVTQPREIGQRQALLELMNSTPSGITFVKSTELDPALKVVYKFDP

Sequences:

>Translated_142_residues
MKRLIISLIAWLLVCFPVRADDALYVVVNTTNGIENLSHHEVVDIFMGRDRTFPDGNKVTVFDNSSDTETRALFYRQLVN
RSLAQVSSYWARLQFSARVTQPREIGQRQALLELMNSTPSGITFVKSTELDPALKVVYKFDP
>Mature_142_residues
MKRLIISLIAWLLVCFPVRADDALYVVVNTTNGIENLSHHEVVDIFMGRDRTFPDGNKVTVFDNSSDTETRALFYRQLVN
RSLAQVSSYWARLQFSARVTQPREIGQRQALLELMNSTPSGITFVKSTELDPALKVVYKFDP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16182; Mature: 16182

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIISLIAWLLVCFPVRADDALYVVVNTTNGIENLSHHEVVDIFMGRDRTFPDGNKVT
CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHEEECCCCCCCCCCEEE
VFDNSSDTETRALFYRQLVNRSLAQVSSYWARLQFSARVTQPREIGQRQALLELMNSTPS
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
GITFVKSTELDPALKVVYKFDP
CEEEEECCCCCHHHEEEEEECC
>Mature Secondary Structure
MKRLIISLIAWLLVCFPVRADDALYVVVNTTNGIENLSHHEVVDIFMGRDRTFPDGNKVT
CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHEEECCCCCCCCCCEEE
VFDNSSDTETRALFYRQLVNRSLAQVSSYWARLQFSARVTQPREIGQRQALLELMNSTPS
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
GITFVKSTELDPALKVVYKFDP
CEEEEECCCCCHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA