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The map label for this gene is yicC [C]

Identifier: 119773460

GI number: 119773460

Start: 386521

End: 387450

Strand: Reverse

Name: yicC [C]

Synonym: Sama_0319

Alternate gene names: 119773460

Gene position: 387450-386521 (Counterclockwise)

Preceding gene: 119773463

Following gene: 119773459

Centisome position: 9.0

GC content: 56.45

Gene sequence:

>930_bases
ATGACGCTGGCCTGGCTTGTGGTTATAATGACGTCCAGACTTAGCCGAAAATCAGCCGGAATCCCTATGATCCACAGCAT
GACCGCCTATGCCCGTATCGAGCATAAATCCTCCTGGGGCAACGCCTCTTTTGAAATCCGCTCAGTGAATCAGCGCTATC
TGGAAACCTACCTGCGCTTGCCAGAGCAGCTGCGCAGCCTCGAACCAGCGCTGCGCGAACGCTTAAGAAAGCGCCTCAGC
CGTGGAAAAGTAGAAGTGAATCTGCGCTATGACGTCGCCAACGACTCAGGCGCCGAACTGAGCATCAACCAAGACCTCGC
CCGTCAACTGCTGGGCGCTGCCAATTGGCTTAAAGCCGAAGCCGGACAGGGTGATATTGCGCTGACTGATATACTCCGCT
GGCCCGGTGTTATCGCCACCGCCGAGCAGGACATGGATGCCATCAGCGCCGAGCTGTTGGGGGCCTTCGATAAGGCACTG
GATCAGTTTGTGGAAGCCCGTGGCCGTGAAGGCAGCGCCATCAAGGAAATGCTCGAAAGCCGCCTTGGTGCCGTGGAAGG
TCAAATTGCCATTGTGCGCGAGCACATGCCAAAGGTCATTGAATGGCAACGTGAAAAACTCACATCCCGGCTTGCAGAGA
TTCAGGGTGAGCTCGACAGCACCCGTATCGAGCAGGAAATGGTGCTGCTGGCGCAAAAACTCGACGTGGCCGAAGAAATG
GACCGCCTTGAAGCGCACATCACCGAAGCTCGCCGCATCCTCAAGAAGGGTGGCAGCGAAGGTCGCCGCCTCGACTTTAT
GATGCAGGAGTTCAACCGCGAGTCGAACACCCTCGCCTCCAAGTCCATCAGCACAGAAATCACAGCTGCCGCCGTGGAGC
TCAAAGTACTTATCGAGCAGATGCGCGAACAGATCCAAAACGTAGAGTGA

Upstream 100 bases:

>100_bases
CCTATTATAGGGCTATGCAGAGCGAGTTGCCACGGTGGATTTTGAATACACTCCGCGCGTTACAAAGGGTCATTAGCAGA
TTTTGCTCACGTTCAGGGCC

Downstream 100 bases:

>100_bases
TGTTTCACCACCCATCACCAACAACCAAGCCCTTGATAAAAGGGCTTTTTTGCATCTCACGGTCAAAGAGTTTGCGTCAG
GAGTCGTAGCTTACTCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTLAWLVVIMTSRLSRKSAGIPMIHSMTAYARIEHKSSWGNASFEIRSVNQRYLETYLRLPEQLRSLEPALRERLRKRLS
RGKVEVNLRYDVANDSGAELSINQDLARQLLGAANWLKAEAGQGDIALTDILRWPGVIATAEQDMDAISAELLGAFDKAL
DQFVEARGREGSAIKEMLESRLGAVEGQIAIVREHMPKVIEWQREKLTSRLAEIQGELDSTRIEQEMVLLAQKLDVAEEM
DRLEAHITEARRILKKGGSEGRRLDFMMQEFNRESNTLASKSISTEITAAAVELKVLIEQMREQIQNVE

Sequences:

>Translated_309_residues
MTLAWLVVIMTSRLSRKSAGIPMIHSMTAYARIEHKSSWGNASFEIRSVNQRYLETYLRLPEQLRSLEPALRERLRKRLS
RGKVEVNLRYDVANDSGAELSINQDLARQLLGAANWLKAEAGQGDIALTDILRWPGVIATAEQDMDAISAELLGAFDKAL
DQFVEARGREGSAIKEMLESRLGAVEGQIAIVREHMPKVIEWQREKLTSRLAEIQGELDSTRIEQEMVLLAQKLDVAEEM
DRLEAHITEARRILKKGGSEGRRLDFMMQEFNRESNTLASKSISTEITAAAVELKVLIEQMREQIQNVE
>Mature_308_residues
TLAWLVVIMTSRLSRKSAGIPMIHSMTAYARIEHKSSWGNASFEIRSVNQRYLETYLRLPEQLRSLEPALRERLRKRLSR
GKVEVNLRYDVANDSGAELSINQDLARQLLGAANWLKAEAGQGDIALTDILRWPGVIATAEQDMDAISAELLGAFDKALD
QFVEARGREGSAIKEMLESRLGAVEGQIAIVREHMPKVIEWQREKLTSRLAEIQGELDSTRIEQEMVLLAQKLDVAEEMD
RLEAHITEARRILKKGGSEGRRLDFMMQEFNRESNTLASKSISTEITAAAVELKVLIEQMREQIQNVE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=287, Percent_Identity=61.6724738675958, Blast_Score=354, Evalue=3e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 34957; Mature: 34825

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAWLVVIMTSRLSRKSAGIPMIHSMTAYARIEHKSSWGNASFEIRSVNQRYLETYLRL
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHH
PEQLRSLEPALRERLRKRLSRGKVEVNLRYDVANDSGAELSINQDLARQLLGAANWLKAE
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHCC
AGQGDIALTDILRWPGVIATAEQDMDAISAELLGAFDKALDQFVEARGREGSAIKEMLES
CCCCCHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RLGAVEGQIAIVREHMPKVIEWQREKLTSRLAEIQGELDSTRIEQEMVLLAQKLDVAEEM
HHCHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLEAHITEARRILKKGGSEGRRLDFMMQEFNRESNTLASKSISTEITAAAVELKVLIEQ
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MREQIQNVE
HHHHHHCCC
>Mature Secondary Structure 
TLAWLVVIMTSRLSRKSAGIPMIHSMTAYARIEHKSSWGNASFEIRSVNQRYLETYLRL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHH
PEQLRSLEPALRERLRKRLSRGKVEVNLRYDVANDSGAELSINQDLARQLLGAANWLKAE
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHCC
AGQGDIALTDILRWPGVIATAEQDMDAISAELLGAFDKALDQFVEARGREGSAIKEMLES
CCCCCHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RLGAVEGQIAIVREHMPKVIEWQREKLTSRLAEIQGELDSTRIEQEMVLLAQKLDVAEEM
HHCHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLEAHITEARRILKKGGSEGRRLDFMMQEFNRESNTLASKSISTEITAAAVELKVLIEQ
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MREQIQNVE
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]