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The map label for this gene is exeF [H]

Identifier: 119773312

GI number: 119773312

Start: 201935

End: 203158

Strand: Direct

Name: exeF [H]

Synonym: Sama_0171

Alternate gene names: 119773312

Gene position: 201935-203158 (Clockwise)

Preceding gene: 119773311

Following gene: 119773313

Centisome position: 4.69

GC content: 56.37

Gene sequence:

>1224_bases
ATGCCGGCTTTTGAATACAAGGCGCTCGATGGCAAGGGCAAACAGCAAAAAGGGGTGATTGAGGCAGACAGTGCCCGTCA
TGCCCGCAGTCAGCTGCGCGATATGCGTCTGATGCCGCTGGAAATCGAACCTGTTGTCGAAAAGGAAACCAAGGCCAAAT
CCGTTGGCTTCAGCCCCTTCAAGCGGGGGATCAGTGTGGCCGAGCTGGCATTGATCACCCGTCAGATTGCCACCCTGGTG
GCCTCTGGCTTACCGGTGGAAGAAGCCCTCAAGGCAGTGGGCCAGCAGTGTGAAAAAGACCGTCTCGCTTCCATGGTGAT
GGCGGTGCGCTCTCGGGTGGTGGAAGGCTATTCTCTTGCCGACTCCATGGCCGAATTCCCTCATATTTTTGATGATTTGT
ATCGCTCTATGGTGGCCTCGGGTGAAAAATCCGGTCATCTGGAAGTGGTGCTCAATCGTCTGGCCGATTACACCGAGCGG
CGTCAGCAGCTCAAGTCCAAACTGACCCAAGCCATGATTTACCCTGTGATGCTGACCTTGGTGGCCATTGGCGTGGTCGC
CGTGTTGCTTGCGGCCGTGGTACCCAAGGTGGTGTCTCAGTTTGAACATCTGGGGCAGGAGTTGCCTGCGACCACTAAGG
CCCTGATGGCATCGTCAGCCTTTGTGCAGGACTATGGCTTGTTAATTATGGTCTTGGTCGTGGTCGCCTTTGTGGTGTTT
CAGCGTTTGCTCGCCAACGACAACTTCAAGATGAAGTACCATCAGTTTCTGCTGCGTCTGCCGGTGGTTGGCCGGGTCAG
TCGCAGCATCAACACGGCCCGCTTTGCCCGCACCCTGAGTATTCTCAGTGCCAGTGCCGTGCCGCTGCTGGATGGGATGC
GTATCGCCGGAGAGGTGATGCAGAACTTAAGGGTGCGCGAAGCGGTCGAAGAAGCAACGGCCCGAGTGCGCGAGGGGACC
AGCCTGGGGGCGGCCCTGACCAACACCAAGCTGTTTCCGCCCATGATGCTCTATATGATTGCCTCGGGCGAAAAGAGCGG
TCAGCTCGAAAACATGCTCGAGCGTGCTGCGGATAATCAGGACAGGGAATTTGAGGCCAATGTGAATCTGGCGCTGGGGG
TATTTCAACCGGCGCTGGTGATCAGCATGGCTGCGGTGGTGCTCTTTATCGTACTCGCCATCCTGCAACCTATTCTGGAA
ATGAACAATTTGATTGGTGGCTAA

Upstream 100 bases:

>100_bases
TCAATCGGTTCCCAGCATTCGCCACGATGGTATGCAAAAGGTCCTGGCGGGCATTACCACCCTCGAAGAAGTACTGCGGG
TGACCCGCGAGGAGTAAGGC

Downstream 100 bases:

>100_bases
GTACCACCTCAGCGGTTTTTACAAGGAGAAAGCGTCAATGCAAAAGCGCAAGCAACAAGGTTTTACCCTGCTGGAAATCA
TGGTGGTTATCGTGATCTTG

Product: general secretion pathway protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MPAFEYKALDGKGKQQKGVIEADSARHARSQLRDMRLMPLEIEPVVEKETKAKSVGFSPFKRGISVAELALITRQIATLV
ASGLPVEEALKAVGQQCEKDRLASMVMAVRSRVVEGYSLADSMAEFPHIFDDLYRSMVASGEKSGHLEVVLNRLADYTER
RQQLKSKLTQAMIYPVMLTLVAIGVVAVLLAAVVPKVVSQFEHLGQELPATTKALMASSAFVQDYGLLIMVLVVVAFVVF
QRLLANDNFKMKYHQFLLRLPVVGRVSRSINTARFARTLSILSASAVPLLDGMRIAGEVMQNLRVREAVEEATARVREGT
SLGAALTNTKLFPPMMLYMIASGEKSGQLENMLERAADNQDREFEANVNLALGVFQPALVISMAAVVLFIVLAILQPILE
MNNLIGG

Sequences:

>Translated_407_residues
MPAFEYKALDGKGKQQKGVIEADSARHARSQLRDMRLMPLEIEPVVEKETKAKSVGFSPFKRGISVAELALITRQIATLV
ASGLPVEEALKAVGQQCEKDRLASMVMAVRSRVVEGYSLADSMAEFPHIFDDLYRSMVASGEKSGHLEVVLNRLADYTER
RQQLKSKLTQAMIYPVMLTLVAIGVVAVLLAAVVPKVVSQFEHLGQELPATTKALMASSAFVQDYGLLIMVLVVVAFVVF
QRLLANDNFKMKYHQFLLRLPVVGRVSRSINTARFARTLSILSASAVPLLDGMRIAGEVMQNLRVREAVEEATARVREGT
SLGAALTNTKLFPPMMLYMIASGEKSGQLENMLERAADNQDREFEANVNLALGVFQPALVISMAAVVLFIVLAILQPILE
MNNLIGG
>Mature_406_residues
PAFEYKALDGKGKQQKGVIEADSARHARSQLRDMRLMPLEIEPVVEKETKAKSVGFSPFKRGISVAELALITRQIATLVA
SGLPVEEALKAVGQQCEKDRLASMVMAVRSRVVEGYSLADSMAEFPHIFDDLYRSMVASGEKSGHLEVVLNRLADYTERR
QQLKSKLTQAMIYPVMLTLVAIGVVAVLLAAVVPKVVSQFEHLGQELPATTKALMASSAFVQDYGLLIMVLVVVAFVVFQ
RLLANDNFKMKYHQFLLRLPVVGRVSRSINTARFARTLSILSASAVPLLDGMRIAGEVMQNLRVREAVEEATARVREGTS
LGAALTNTKLFPPMMLYMIASGEKSGQLENMLERAADNQDREFEANVNLALGVFQPALVISMAAVVLFIVLAILQPILEM
NNLIGG

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=403, Percent_Identity=46.1538461538462, Blast_Score=374, Evalue=1e-105,
Organism=Escherichia coli, GI1786295, Length=404, Percent_Identity=23.2673267326733, Blast_Score=133, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR011850
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 44632; Mature: 44501

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAFEYKALDGKGKQQKGVIEADSARHARSQLRDMRLMPLEIEPVVEKETKAKSVGFSPF
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHH
KRGISVAELALITRQIATLVASGLPVEEALKAVGQQCEKDRLASMVMAVRSRVVEGYSLA
HHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSMAEFPHIFDDLYRSMVASGEKSGHLEVVLNRLADYTERRQQLKSKLTQAMIYPVMLTL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAIGVVAVLLAAVVPKVVSQFEHLGQELPATTKALMASSAFVQDYGLLIMVLVVVAFVVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRLLANDNFKMKYHQFLLRLPVVGRVSRSINTARFARTLSILSASAVPLLDGMRIAGEVM
HHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNLRVREAVEEATARVREGTSLGAALTNTKLFPPMMLYMIASGEKSGQLENMLERAADNQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
DREFEANVNLALGVFQPALVISMAAVVLFIVLAILQPILEMNNLIGG
CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1640836 [H]