| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is moeB [H]
Identifier: 119773279
GI number: 119773279
Start: 153990
End: 154754
Strand: Reverse
Name: moeB [H]
Synonym: Sama_0137
Alternate gene names: 119773279
Gene position: 154754-153990 (Counterclockwise)
Preceding gene: 119773280
Following gene: 119773272
Centisome position: 3.59
GC content: 57.12
Gene sequence:
>765_bases ATGACCGACGACATACTCTCTGACACAGAGCTGCTACGCTACAGTCGCCAGATTTCCATAAAATCCATGGATATAGAGGG TCAGGAAAAGCTCAAACAGGCTCGGGTGCTGGTGATAGGCGCCGGCGGCCTTGGCTGCGCCGCCGCCCAGTATCTGGGCG TTGCCGGTGTTGGTGCAATGACTCTGGTGGACTTTGACACTGTGGAGCTGTCGAACCTGCAACGCCAGGTGCTACACCGG GACAATCGCATCGGCATGCTCAAGGTGGAATCGGCCAGGCTGGCTCTCAATGAGCTTAATCCCCATGTGCAGATAAATCC CATTGGCCGGGTACTGGACGACCCCGAAATGGATGCGTTGGTCGCAGACCATTCCCTGGTGCTGGACTGTACCGACAATG TGGCGGTGCGTCAGCAACTGAACCGGGCATGCTTTGCCCATAAGGTACCGCTGGTATCGGCCGCGGCGATTCGCATGGAA GGCATGATTACCGTGTTTGACTATGCCGGAGACAGCCCCTGTTATCAGTGCTTCGCCAGCCTGTTTGGTGAGCAGCAGCT GACCTGTGTTGAGTCGGGTATTCTGGCCCCGGTGGTGGGGTTGATGGGGTGCTTACAGGCAGTTGAGGCCATTAAATTGA TTGCCGGCATGGGCAAACCTTTGCTGGGGCGCCTGCTGATGGTGGATGCCATGACGATGGAGATGCGCCAGATGATACTG CCACGCCAGCCCAATTGCCCTGTTTGCGGTGGTGCCACAGTTTAA
Upstream 100 bases:
>100_bases TCGCCAACTGCTTTATCCATCTGCCTCAATTTCAGGGCAGCCTGGAAGCGGGCGAGACTATTCTGGTTGAACCCTTCGAT AGCATTTTGGACTAAGCCCA
Downstream 100 bases:
>100_bases ACTCTGGGTTGGGCGGCTTCGATTCTCAGTAAAATGGCTTGGGGTCTACATCCAGGCTGGATGGGGAGACGCCCCGCTCT ATGTTCAGATCTGACTTGAG
Product: molybdopterin biosynthesis protein MoeB
Products: NA
Alternate protein names: MoaD protein adenylase; Molybdopterin-converting factor subunit 1 adenylase [H]
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTDDILSDTELLRYSRQISIKSMDIEGQEKLKQARVLVIGAGGLGCAAAQYLGVAGVGAMTLVDFDTVELSNLQRQVLHR DNRIGMLKVESARLALNELNPHVQINPIGRVLDDPEMDALVADHSLVLDCTDNVAVRQQLNRACFAHKVPLVSAAAIRME GMITVFDYAGDSPCYQCFASLFGEQQLTCVESGILAPVVGLMGCLQAVEAIKLIAGMGKPLLGRLLMVDAMTMEMRQMIL PRQPNCPVCGGATV
Sequences:
>Translated_254_residues MTDDILSDTELLRYSRQISIKSMDIEGQEKLKQARVLVIGAGGLGCAAAQYLGVAGVGAMTLVDFDTVELSNLQRQVLHR DNRIGMLKVESARLALNELNPHVQINPIGRVLDDPEMDALVADHSLVLDCTDNVAVRQQLNRACFAHKVPLVSAAAIRME GMITVFDYAGDSPCYQCFASLFGEQQLTCVESGILAPVVGLMGCLQAVEAIKLIAGMGKPLLGRLLMVDAMTMEMRQMIL PRQPNCPVCGGATV >Mature_253_residues TDDILSDTELLRYSRQISIKSMDIEGQEKLKQARVLVIGAGGLGCAAAQYLGVAGVGAMTLVDFDTVELSNLQRQVLHRD NRIGMLKVESARLALNELNPHVQINPIGRVLDDPEMDALVADHSLVLDCTDNVAVRQQLNRACFAHKVPLVSAAAIRMEG MITVFDYAGDSPCYQCFASLFGEQQLTCVESGILAPVVGLMGCLQAVEAIKLIAGMGKPLLGRLLMVDAMTMEMRQMILP RQPNCPVCGGATV
Specific function: Catalyzes the adenylation by ATP of the carboxyl group of the C-terminal glycine of sulfur carrier protein moaD [H]
COG id: COG0476
COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesA/moeB/thiF family [H]
Homologues:
Organism=Homo sapiens, GI7657339, Length=228, Percent_Identity=46.0526315789474, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI4885649, Length=144, Percent_Identity=32.6388888888889, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI23510338, Length=166, Percent_Identity=30.1204819277108, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI23510340, Length=166, Percent_Identity=30.1204819277108, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI38045948, Length=164, Percent_Identity=32.9268292682927, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI38045944, Length=111, Percent_Identity=34.2342342342342, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI38045942, Length=111, Percent_Identity=34.2342342342342, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1787048, Length=245, Percent_Identity=62.8571428571429, Blast_Score=329, Evalue=1e-91, Organism=Escherichia coli, GI87082356, Length=248, Percent_Identity=41.5322580645161, Blast_Score=176, Evalue=1e-45, Organism=Escherichia coli, GI1789177, Length=124, Percent_Identity=30.6451612903226, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17540406, Length=248, Percent_Identity=38.3064516129032, Blast_Score=186, Evalue=8e-48, Organism=Caenorhabditis elegans, GI193203301, Length=153, Percent_Identity=30.718954248366, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI86565433, Length=155, Percent_Identity=31.6129032258064, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI86565431, Length=155, Percent_Identity=31.6129032258064, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71984476, Length=67, Percent_Identity=43.2835820895522, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6321903, Length=259, Percent_Identity=37.8378378378378, Blast_Score=162, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6322639, Length=164, Percent_Identity=27.4390243902439, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6320598, Length=153, Percent_Identity=26.797385620915, Blast_Score=69, Evalue=9e-13, Organism=Drosophila melanogaster, GI24582879, Length=249, Percent_Identity=45.3815261044177, Blast_Score=214, Evalue=3e-56, Organism=Drosophila melanogaster, GI24660640, Length=151, Percent_Identity=32.4503311258278, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI28573937, Length=161, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI20129973, Length=109, Percent_Identity=35.7798165137615, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI24641311, Length=255, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007901 - InterPro: IPR009036 - InterPro: IPR012730 - InterPro: IPR016040 - InterPro: IPR000594 [H]
Pfam domain/function: PF05237 MoeZ_MoeB; PF00899 ThiF [H]
EC number: NA
Molecular weight: Translated: 27429; Mature: 27297
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDILSDTELLRYSRQISIKSMDIEGQEKLKQARVLVIGAGGLGCAAAQYLGVAGVGAM CCCCCCCHHHHHHHHHHCEEEEECCCCHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCEE TLVDFDTVELSNLQRQVLHRDNRIGMLKVESARLALNELNPHVQINPIGRVLDDPEMDAL EEEECCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCEEECCCCCCCCCCCHHHE VADHSLVLDCTDNVAVRQQLNRACFAHKVPLVSAAAIRMEGMITVFDYAGDSPCYQCFAS EECCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHH LFGEQQLTCVESGILAPVVGLMGCLQAVEAIKLIAGMGKPLLGRLLMVDAMTMEMRQMIL HHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC PRQPNCPVCGGATV CCCCCCCCCCCCCC >Mature Secondary Structure TDDILSDTELLRYSRQISIKSMDIEGQEKLKQARVLVIGAGGLGCAAAQYLGVAGVGAM CCCCCCHHHHHHHHHHCEEEEECCCCHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCEE TLVDFDTVELSNLQRQVLHRDNRIGMLKVESARLALNELNPHVQINPIGRVLDDPEMDAL EEEECCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCEEECCCCCCCCCCCHHHE VADHSLVLDCTDNVAVRQQLNRACFAHKVPLVSAAAIRMEGMITVFDYAGDSPCYQCFAS EECCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHH LFGEQQLTCVESGILAPVVGLMGCLQAVEAIKLIAGMGKPLLGRLLMVDAMTMEMRQMIL HHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC PRQPNCPVCGGATV CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3045084; 8905232; 9278503 [H]