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The map label for this gene is yecC [C]

Identifier: 119773274

GI number: 119773274

Start: 148875

End: 150365

Strand: Direct

Name: yecC [C]

Synonym: Sama_0132

Alternate gene names: 119773274

Gene position: 148875-150365 (Clockwise)

Preceding gene: 119773273

Following gene: 119773275

Centisome position: 3.46

GC content: 59.96

Gene sequence:

>1491_bases
GTGACACAGCCGCCGCTCGTCAGCCTCGAGGACCTCGGCTACGGCCATGGTCCCGGGCAACGGCTGTTTGATGGCCTGTC
GCTGCATATTCATTCGGGCGAGTGCCATTGCATCTGTGGGCCCACGGGCAGCGGTAAATCAAGCCTTTTGGCACTGATTG
CGGGTTTGAATGAACGCCCTTTCGCGGGTGTTCTGGAGTGCCAGTCAGGCGTGCAGGTGGCGCTGGTGATGCAAGACCCT
CAGGTGCAGTTACTGCGTCGAACCCTGGGCGCCGAAGTGGCCTTTGGGCTGGAAAACCAAGGTGTTGCTGCAGACGATAT
GCCTGCGGCCGTGAAATCCGCCCTCATCAGAGTGGGGTTGGAGCTGCCGCTGGATACCTGCATAGATACGCTGTCGCTGG
GGCAGAAATACCGGGTCATGTTGGCCTCGCAATTGGTGTTGAACCCGAGAGTCCTGTTGCTGGATGAACCCTGGGCCCAA
CTGGATGACGAGGGTGTCGGCCAATTGATGGTGACTTTGGCCCGCCTCAAAGCCGACGGCATGGCTCTGATTATTGCAGA
GCATCATCCGGCTGCCTTTGCCGGATTGCTGGATTTTCATTGGTTGCTGGACCAAGGCCGTCTGCAACCGGCAGCGGCTG
GCAAGGCGTCAGGAGCTCTGCGGGCAGACATCTTGTGCCGCTGGAATCCGAATGGCCTTGGGGGGCGAAAGTGCCTGACT
CTGGCACCCTGTGACTTGGTACTCCCTACTCTGGCACAGGGCGGTAGAGGCCGTTCCGGCAGTAAAGGTTTTCTGTCTGC
CAGGTTTGCGTCCGCGGCGCCCGAGGGGCGCTCTTTATTCAGGCTGGACACACCTCTGGTTCTCAGAACCGGTGACATCA
GGTTGCTGCTCGGCGACAACGGCAGCGGCAAGAGCACGCTGCTCAAGGCCCTTGCCGGCCTGCAGGATGGGGTGAAATTA
CCGGTCAAACTCGATGGCCGTATTCCCAATACGGCTGCGGGAGAGGTGGCGCTGATGCTGCAGCGCCCCAGCCGGCAACT
GTTTGAACTGACTGTAGTGGAAGAGCTGAGTTTCAGTATCAGGCGTCGTGGGCTGGATGAAGCTCAGGTCGCCTGGGTGC
AGGCGTTTCTCGCCATTGAACATCTGGCGGCGGTGTCACCCCACAAGCTTTCCTGGGGGCAACAGCATCTGGTGTTGCTG
GCGGCACTGGTGATTACCGAGCCCAGGTTGTTGCTGCTGGACGACCCCTTTGCCGGATTGGATGAACAGAGTCTGATGGC
CTGCATCAAGCTGCTTAACTGGTACCTGTCACGGGGCGGTTGCTGTGTGCTGGCGTGCCACAGAGATGTGACCGGGTTTG
AACAGGTGGCGCGCTGGCAGCTTAAGGATGGCCTTTTAACAGAAGTTGAAGCCAGTGGACAGGCGCTTGCAGCAAGGGAT
GGTGCCCAAACTAAGCCGTGGGAGCTGGCTGCCGGGGGAATGGGCCGGTGA

Upstream 100 bases:

>100_bases
TCTACATCAGGGCCACTAACCTGCTGGACGAAAACTACGCCGAGAGCGAGTCTCTGCCCCAGGCGGGTCGCCAGTGGTTT
ATCGGTATGGATTGGCGCTT

Downstream 100 bases:

>100_bases
GGCTACTATCTCCAACAAGCCGAAGAGCACGCAAGCCGTTGGTGGTAGATGGCCGATGTGGACTGGCCATCCTGGGTACC
CTCGGCATGTCGATGCTGGC

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MTQPPLVSLEDLGYGHGPGQRLFDGLSLHIHSGECHCICGPTGSGKSSLLALIAGLNERPFAGVLECQSGVQVALVMQDP
QVQLLRRTLGAEVAFGLENQGVAADDMPAAVKSALIRVGLELPLDTCIDTLSLGQKYRVMLASQLVLNPRVLLLDEPWAQ
LDDEGVGQLMVTLARLKADGMALIIAEHHPAAFAGLLDFHWLLDQGRLQPAAAGKASGALRADILCRWNPNGLGGRKCLT
LAPCDLVLPTLAQGGRGRSGSKGFLSARFASAAPEGRSLFRLDTPLVLRTGDIRLLLGDNGSGKSTLLKALAGLQDGVKL
PVKLDGRIPNTAAGEVALMLQRPSRQLFELTVVEELSFSIRRRGLDEAQVAWVQAFLAIEHLAAVSPHKLSWGQQHLVLL
AALVITEPRLLLLDDPFAGLDEQSLMACIKLLNWYLSRGGCCVLACHRDVTGFEQVARWQLKDGLLTEVEASGQALAARD
GAQTKPWELAAGGMGR

Sequences:

>Translated_496_residues
MTQPPLVSLEDLGYGHGPGQRLFDGLSLHIHSGECHCICGPTGSGKSSLLALIAGLNERPFAGVLECQSGVQVALVMQDP
QVQLLRRTLGAEVAFGLENQGVAADDMPAAVKSALIRVGLELPLDTCIDTLSLGQKYRVMLASQLVLNPRVLLLDEPWAQ
LDDEGVGQLMVTLARLKADGMALIIAEHHPAAFAGLLDFHWLLDQGRLQPAAAGKASGALRADILCRWNPNGLGGRKCLT
LAPCDLVLPTLAQGGRGRSGSKGFLSARFASAAPEGRSLFRLDTPLVLRTGDIRLLLGDNGSGKSTLLKALAGLQDGVKL
PVKLDGRIPNTAAGEVALMLQRPSRQLFELTVVEELSFSIRRRGLDEAQVAWVQAFLAIEHLAAVSPHKLSWGQQHLVLL
AALVITEPRLLLLDDPFAGLDEQSLMACIKLLNWYLSRGGCCVLACHRDVTGFEQVARWQLKDGLLTEVEASGQALAARD
GAQTKPWELAAGGMGR
>Mature_495_residues
TQPPLVSLEDLGYGHGPGQRLFDGLSLHIHSGECHCICGPTGSGKSSLLALIAGLNERPFAGVLECQSGVQVALVMQDPQ
VQLLRRTLGAEVAFGLENQGVAADDMPAAVKSALIRVGLELPLDTCIDTLSLGQKYRVMLASQLVLNPRVLLLDEPWAQL
DDEGVGQLMVTLARLKADGMALIIAEHHPAAFAGLLDFHWLLDQGRLQPAAAGKASGALRADILCRWNPNGLGGRKCLTL
APCDLVLPTLAQGGRGRSGSKGFLSARFASAAPEGRSLFRLDTPLVLRTGDIRLLLGDNGSGKSTLLKALAGLQDGVKLP
VKLDGRIPNTAAGEVALMLQRPSRQLFELTVVEELSFSIRRRGLDEAQVAWVQAFLAIEHLAAVSPHKLSWGQQHLVLLA
ALVITEPRLLLLDDPFAGLDEQSLMACIKLLNWYLSRGGCCVLACHRDVTGFEQVARWQLKDGLLTEVEASGQALAARDG
AQTKPWELAAGGMGR

Specific function: Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system [H]

COG id: COG1122

COG function: function code P; ABC-type cobalt transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI46592915, Length=223, Percent_Identity=30.0448430493274, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI46592964, Length=223, Percent_Identity=30.0448430493274, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI46592956, Length=223, Percent_Identity=30.0448430493274, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI46592978, Length=223, Percent_Identity=30.0448430493274, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI46592898, Length=223, Percent_Identity=30.0448430493274, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI46592971, Length=223, Percent_Identity=30.0448430493274, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI9665248, Length=175, Percent_Identity=33.1428571428571, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1788225, Length=218, Percent_Identity=29.8165137614679, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI87081709, Length=171, Percent_Identity=35.672514619883, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1789991, Length=489, Percent_Identity=23.5173824130879, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787712, Length=204, Percent_Identity=31.8627450980392, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1789873, Length=200, Percent_Identity=31.5, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1787792, Length=494, Percent_Identity=24.8987854251012, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787029, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081791, Length=175, Percent_Identity=33.1428571428571, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1786563, Length=181, Percent_Identity=32.5966850828729, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790467, Length=201, Percent_Identity=31.3432835820896, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789032, Length=179, Percent_Identity=32.4022346368715, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788761, Length=223, Percent_Identity=30.9417040358744, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1787089, Length=201, Percent_Identity=29.8507462686567, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1787105, Length=208, Percent_Identity=29.8076923076923, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787370, Length=142, Percent_Identity=33.8028169014084, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786872, Length=221, Percent_Identity=26.2443438914027, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1786398, Length=201, Percent_Identity=27.363184079602, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=191, Percent_Identity=28.2722513089005, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17533971, Length=194, Percent_Identity=29.8969072164948, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI28574744, Length=194, Percent_Identity=30.4123711340206, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24581191, Length=211, Percent_Identity=27.9620853080569, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24581189, Length=211, Percent_Identity=27.9620853080569, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24581193, Length=211, Percent_Identity=27.9620853080569, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24581195, Length=211, Percent_Identity=27.9620853080569, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI85816269, Length=201, Percent_Identity=28.3582089552239, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24580553, Length=201, Percent_Identity=28.3582089552239, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI85724864, Length=201, Percent_Identity=28.3582089552239, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24580555, Length=201, Percent_Identity=28.3582089552239, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI161076682, Length=237, Percent_Identity=27.4261603375527, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI161076684, Length=226, Percent_Identity=27.4336283185841, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24581617, Length=226, Percent_Identity=27.4336283185841, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24581615, Length=226, Percent_Identity=27.4336283185841, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24662800, Length=192, Percent_Identity=26.0416666666667, Blast_Score=67, Evalue=4e-11,
Organism=Drosophila melanogaster, GI19920532, Length=189, Percent_Identity=29.1005291005291, Blast_Score=66, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24580930, Length=189, Percent_Identity=29.1005291005291, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR003339 [H]

Pfam domain/function: PF00005 ABC_tran; PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 52985; Mature: 52854

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPPLVSLEDLGYGHGPGQRLFDGLSLHIHSGECHCICGPTGSGKSSLLALIAGLNERP
CCCCCEEEHHHCCCCCCCHHHHHCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCC
FAGVLECQSGVQVALVMQDPQVQLLRRTLGAEVAFGLENQGVAADDMPAAVKSALIRVGL
CCHHHCCCCCCEEEEEECCCHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHCC
ELPLDTCIDTLSLGQKYRVMLASQLVLNPRVLLLDEPWAQLDDEGVGQLMVTLARLKADG
CCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHHHHHCCCC
MALIIAEHHPAAFAGLLDFHWLLDQGRLQPAAAGKASGALRADILCRWNPNGLGGRKCLT
EEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEE
LAPCDLVLPTLAQGGRGRSGSKGFLSARFASAAPEGRSLFRLDTPLVLRTGDIRLLLGDN
ECCHHHHHHHHHCCCCCCCCCCCCEEEHHHCCCCCCCCEEEECCCEEEEECCEEEEECCC
GSGKSTLLKALAGLQDGVKLPVKLDGRIPNTAAGEVALMLQRPSRQLFELTVVEELSFSI
CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHEEHHHHHHHHHH
RRRGLDEAQVAWVQAFLAIEHLAAVSPHKLSWGQQHLVLLAALVITEPRLLLLDDPFAGL
HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
DEQSLMACIKLLNWYLSRGGCCVLACHRDVTGFEQVARWQLKDGLLTEVEASGQALAARD
CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECC
GAQTKPWELAAGGMGR
CCCCCCCEECCCCCCC
>Mature Secondary Structure 
TQPPLVSLEDLGYGHGPGQRLFDGLSLHIHSGECHCICGPTGSGKSSLLALIAGLNERP
CCCCEEEHHHCCCCCCCHHHHHCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCC
FAGVLECQSGVQVALVMQDPQVQLLRRTLGAEVAFGLENQGVAADDMPAAVKSALIRVGL
CCHHHCCCCCCEEEEEECCCHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHCC
ELPLDTCIDTLSLGQKYRVMLASQLVLNPRVLLLDEPWAQLDDEGVGQLMVTLARLKADG
CCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHHHHHCCCC
MALIIAEHHPAAFAGLLDFHWLLDQGRLQPAAAGKASGALRADILCRWNPNGLGGRKCLT
EEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEE
LAPCDLVLPTLAQGGRGRSGSKGFLSARFASAAPEGRSLFRLDTPLVLRTGDIRLLLGDN
ECCHHHHHHHHHCCCCCCCCCCCCEEEHHHCCCCCCCCEEEECCCEEEEECCEEEEECCC
GSGKSTLLKALAGLQDGVKLPVKLDGRIPNTAAGEVALMLQRPSRQLFELTVVEELSFSI
CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHEEHHHHHHHHHH
RRRGLDEAQVAWVQAFLAIEHLAAVSPHKLSWGQQHLVLLAALVITEPRLLLLDDPFAGL
HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
DEQSLMACIKLLNWYLSRGGCCVLACHRDVTGFEQVARWQLKDGLLTEVEASGQALAARD
CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECC
GAQTKPWELAAGGMGR
CCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12381787 [H]