Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773251

Identifier: 119773251

GI number: 119773251

Start: 122136

End: 123344

Strand: Reverse

Name: 119773251

Synonym: Sama_0109

Alternate gene names: NA

Gene position: 123344-122136 (Counterclockwise)

Preceding gene: 119773258

Following gene: 119773250

Centisome position: 2.86

GC content: 50.87

Gene sequence:

>1209_bases
ATGAGTAAAATTAAGGTAGCACTGCTGGTCGATGAATATTTTGGCGGCGCCAAAACCAAATATGGCGGATATGGCTTTTT
GGCCAGACATCTGGTGGCCAAACACCTGCCTGACGATCAGGTCGACGTGGACGTTTTGCTGAAAAAAGACTGCGGCAAAG
TGCGTCTTTGGCCCAAGTGTTTTATGGTCGATGGCATCAGGGTATACAAGCTGGCAGCACGGGCCTTTGATTGGGTAAAC
AACCTGTTTCTGCGGCAGAAAAACTATGATGTTTTTCTTTCCATCGAAATGACCACCCACTCCTACCGCATCTTCAGCAA
GGCCCCGGGGAAAAATAAAAAACTGCTGTTTTGGATCCAGGACCCGAGACCCACCTACGAGTGGGATGAAATCCAGACCG
TGAAGCTCTTTCCCGAGCCCAGTTACTGGGATGCAGAGATCTACGATTTTGTGAATCAATACGCCCGGAGTGGCAACGTA
CGCTTTATCAGTCAGGCAAAGTGTCTCGATCAAAAGGCCAGGGACTTGTATCGATTACCTGCCAATACGTCCATCAACTA
CCTGCCGAACCCAATCGAAATTGATGAGACGTTTGACCTGGACAGCTTCCCGAAGCAAAACAGCATAATATTCCTTGGCC
GTATCGAGTCCGTAAAGCGGGGTTGGCTGTTCGCCGAAATCGCCAAGGCCATGCCGCAGTGCCAGTTTTATATGTTGGGT
CAGGCACACAGACAGGCGGATGAAAACAATGCCGTGATGTCAGGCTACCAGGCCATTCCCAACCTGCATTTCGTCGGTCA
TGTGGAAGGCGAGCAGAAGAATCGTTTCCTGAAAGAGGCCAAGGTGTTGGTTAATACCTCTATTCATGAAGCCCTGCCGA
TTTCCTTCCTCGAGGCCCTGTCCTACGGCACCCTGCTGGTGAGTTGCCAGAATCCCGATGAACTGGCGAGCAAGTTTGGC
GTGTATACCGGCAAGGTGTTGGGTGATGGCTTCGACAAGGTGGAACTCTTTGTCGCCGGAATCAACCAGCTGCTGACAAA
TGATGACCACAGACACCAACTCGCAAAAGACGCCATTGCCTATATTAAAGAAGTGCATTCACTGTCCCGCTTCACAGGGG
ACATCAAGCATGAACTGTTGACCCTGTGCGCAAGCCGCAATGAGCCAGTGAAAGCAACTGGCCGCACCACCACCAGCACA
GTACAATAG

Upstream 100 bases:

>100_bases
TTCAATAAATACACATTTAAGATAATGATTTTATTAATTATTTTGCTATTGGCGGATGAGTTAATACAATGCCCGCAAAC
GGGCAATCCAGAAAGCATTC

Downstream 100 bases:

>100_bases
CCTTTTATCTGTGTGGAACAGAGATGAAACGACTCATAGTAGATTTGGATGGCACCCTCACCAAGGCCGACAACACAGAT
TACAGTGCCGTGTCGCCCCG

Product: glycosyl transferase, group 1 family protein

Products: NA

Alternate protein names: Glycosyl Transferase Group 1 Protein; Glycosyltransferase

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MSKIKVALLVDEYFGGAKTKYGGYGFLARHLVAKHLPDDQVDVDVLLKKDCGKVRLWPKCFMVDGIRVYKLAARAFDWVN
NLFLRQKNYDVFLSIEMTTHSYRIFSKAPGKNKKLLFWIQDPRPTYEWDEIQTVKLFPEPSYWDAEIYDFVNQYARSGNV
RFISQAKCLDQKARDLYRLPANTSINYLPNPIEIDETFDLDSFPKQNSIIFLGRIESVKRGWLFAEIAKAMPQCQFYMLG
QAHRQADENNAVMSGYQAIPNLHFVGHVEGEQKNRFLKEAKVLVNTSIHEALPISFLEALSYGTLLVSCQNPDELASKFG
VYTGKVLGDGFDKVELFVAGINQLLTNDDHRHQLAKDAIAYIKEVHSLSRFTGDIKHELLTLCASRNEPVKATGRTTTST
VQ

Sequences:

>Translated_402_residues
MSKIKVALLVDEYFGGAKTKYGGYGFLARHLVAKHLPDDQVDVDVLLKKDCGKVRLWPKCFMVDGIRVYKLAARAFDWVN
NLFLRQKNYDVFLSIEMTTHSYRIFSKAPGKNKKLLFWIQDPRPTYEWDEIQTVKLFPEPSYWDAEIYDFVNQYARSGNV
RFISQAKCLDQKARDLYRLPANTSINYLPNPIEIDETFDLDSFPKQNSIIFLGRIESVKRGWLFAEIAKAMPQCQFYMLG
QAHRQADENNAVMSGYQAIPNLHFVGHVEGEQKNRFLKEAKVLVNTSIHEALPISFLEALSYGTLLVSCQNPDELASKFG
VYTGKVLGDGFDKVELFVAGINQLLTNDDHRHQLAKDAIAYIKEVHSLSRFTGDIKHELLTLCASRNEPVKATGRTTTST
VQ
>Mature_401_residues
SKIKVALLVDEYFGGAKTKYGGYGFLARHLVAKHLPDDQVDVDVLLKKDCGKVRLWPKCFMVDGIRVYKLAARAFDWVNN
LFLRQKNYDVFLSIEMTTHSYRIFSKAPGKNKKLLFWIQDPRPTYEWDEIQTVKLFPEPSYWDAEIYDFVNQYARSGNVR
FISQAKCLDQKARDLYRLPANTSINYLPNPIEIDETFDLDSFPKQNSIIFLGRIESVKRGWLFAEIAKAMPQCQFYMLGQ
AHRQADENNAVMSGYQAIPNLHFVGHVEGEQKNRFLKEAKVLVNTSIHEALPISFLEALSYGTLLVSCQNPDELASKFGV
YTGKVLGDGFDKVELFVAGINQLLTNDDHRHQLAKDAIAYIKEVHSLSRFTGDIKHELLTLCASRNEPVKATGRTTTSTV
Q

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45880; Mature: 45749

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIKVALLVDEYFGGAKTKYGGYGFLARHLVAKHLPDDQVDVDVLLKKDCGKVRLWPKC
CCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCEE
FMVDGIRVYKLAARAFDWVNNLFLRQKNYDVFLSIEMTTHSYRIFSKAPGKNKKLLFWIQ
EEECCHHHHHHHHHHHHHHHHHHEEECCCEEEEEEEEECCEEEEEECCCCCCCEEEEEEC
DPRPTYEWDEIQTVKLFPEPSYWDAEIYDFVNQYARSGNVRFISQAKCLDQKARDLYRLP
CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHEECC
ANTSINYLPNPIEIDETFDLDSFPKQNSIIFLGRIESVKRGWLFAEIAKAMPQCQFYMLG
CCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEHHHHHHCHHHHHHHHHCCCCEEEECC
QAHRQADENNAVMSGYQAIPNLHFVGHVEGEQKNRFLKEAKVLVNTSIHEALPISFLEAL
HHHHCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SYGTLLVSCQNPDELASKFGVYTGKVLGDGFDKVELFVAGINQLLTNDDHRHQLAKDAIA
CCCEEEEEECCHHHHHHHHCCEECHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YIKEVHSLSRFTGDIKHELLTLCASRNEPVKATGRTTTSTVQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCC
>Mature Secondary Structure 
SKIKVALLVDEYFGGAKTKYGGYGFLARHLVAKHLPDDQVDVDVLLKKDCGKVRLWPKC
CCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCEE
FMVDGIRVYKLAARAFDWVNNLFLRQKNYDVFLSIEMTTHSYRIFSKAPGKNKKLLFWIQ
EEECCHHHHHHHHHHHHHHHHHHEEECCCEEEEEEEEECCEEEEEECCCCCCCEEEEEEC
DPRPTYEWDEIQTVKLFPEPSYWDAEIYDFVNQYARSGNVRFISQAKCLDQKARDLYRLP
CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHEECC
ANTSINYLPNPIEIDETFDLDSFPKQNSIIFLGRIESVKRGWLFAEIAKAMPQCQFYMLG
CCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEHHHHHHCHHHHHHHHHCCCCEEEECC
QAHRQADENNAVMSGYQAIPNLHFVGHVEGEQKNRFLKEAKVLVNTSIHEALPISFLEAL
HHHHCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SYGTLLVSCQNPDELASKFGVYTGKVLGDGFDKVELFVAGINQLLTNDDHRHQLAKDAIA
CCCEEEEEECCHHHHHHHHCCEECHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YIKEVHSLSRFTGDIKHELLTLCASRNEPVKATGRTTTSTVQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA